pycom13g05190

Cytochrome P450

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
3466322 .. 3467072
751 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g05190.2

Sequence Viewer

Length: 660 bp
ATGGTTTCGGTGGATGAGTGCAAGACGTTTTACTTTGCTGGACAAGAAACCATTAATACTTTGTTTGCTTGGACTCTGTTTCTTCTGGCACTCCATACGGATTGGCAAGAGGAATCAAGAAAGGGGGTGATGGAATTATTTGTAAGAAAGTCAAAAACTCAATCAGTTGCTTCACGAAGTGGTGGAAACATGTTTTCAGTTGAGATTAGAGATTCTAATTTGGGAATCTGTTTTTCTTTTTTATTCATGCAGACGAGTATGATTTTCTATGAGTCTCACAGGTTATATCCCCCTCTTGATTCCTTATTAAGGGGAGTTGATAGGGAAATTAGACTGGGGAATGTCAGTGTGCCTAGACAGGGGAATGTCATTGTGCCACCTAATGTGGAATTGGTTTTCTCAAATCTAGCATTTCAAGATTCGCAGAAGGGATCGCTAAAGCTAGCTACTAACAATAACATAAGCACTTTCATACCCTTTCGACCGAGACCTCAAAGCTGTGTGGAGTCGAACTTTGCAACCATCGAAACAAAGATTGCTCTGTCGATGATTCTACAATGCTACTCCTTCACTCTTTCCCCAGGTTATGTCCGCTTGCCCTTTCATTATTTGACAGTGCGGCCAAAACATAGAATTCAGGTAATGCTACATTCACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

220

Amino Acids

25.03

Weight (kDa)

9.14

Isoelectric Point (pI)

48.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 592, 619
AclWI GGATC 1 cut(s) 439
AcoI YGGCCR 1 cut(s) 620
AcsI RAATTY 1 cut(s) 633
AdeI CACNNNGTG 1 cut(s) 179
AfiI CCNNNNNNNGG 2 cut(s) 309, 359
AflIII ACRYGT 1 cut(s) 189
AgsI TTSAA 1 cut(s) 416
AjnI CCWGG 1 cut(s) 580
AluBI AGCT 3 cut(s) 442, 446, 498
AluI AGCT 3 cut(s) 442, 446, 498
Alw26I GTCTC 2 cut(s) 279, 481
AlwI GGATC 1 cut(s) 439
AoxI GGCC 1 cut(s) 620
ApoI RAATTY 1 cut(s) 633
AseI ATTAAT 1 cut(s) 54
AsuHPI GGTGA 1 cut(s) 139
AsuNHI GCTAGC 1 cut(s) 442
BccI CCATC 2 cut(s) 124, 530
BciT130I CCWGG 1 cut(s) 582
BcoDI GTCTC 2 cut(s) 279, 481
BfaI CTAG 3 cut(s) 354, 407, 443
BisI GCNGC 1 cut(s) 620
BlsI GCNGC 1 cut(s) 621
Bme1390I CCNGG 1 cut(s) 582
BmrFI CCNGG 1 cut(s) 582
BmrI ACTGGG 1 cut(s) 344
BmtI GCTAGC 1 cut(s) 446
BmuI ACTGGG 1 cut(s) 344
BsaI GGTCTC 1 cut(s) 481
BsaJI CCNNGG 1 cut(s) 580
Bsc4I CCNNNNNNNGG 2 cut(s) 309, 359
Bse1I ACTGG 1 cut(s) 339
BseBI CCWGG 1 cut(s) 582
BseDI CCNNGG 1 cut(s) 580
BseGI GGATG 1 cut(s) 19
BseLI CCNNNNNNNGG 2 cut(s) 309, 359
BseNI ACTGG 1 cut(s) 339
Bsh1285I CGRYCG 1 cut(s) 485
BshFI GGCC 1 cut(s) 622
BsiEI CGRYCG 1 cut(s) 485
BslI CCNNNNNNNGG 2 cut(s) 309, 359
BsmAI GTCTC 2 cut(s) 279, 481
BsnI GGCC 1 cut(s) 622
Bso31I GGTCTC 1 cut(s) 481
Bsp143I GATC 1 cut(s) 431
BspACI CCGC 2 cut(s) 592, 619
BspANI GGCC 1 cut(s) 622
BspOI GCTAGC 1 cut(s) 446
BspPI GGATC 1 cut(s) 439
BspTNI GGTCTC 1 cut(s) 481
BsrI ACTGG 1 cut(s) 339
BssECI CCNNGG 1 cut(s) 580
BssMI GATC 1 cut(s) 431
Bst2UI CCWGG 1 cut(s) 582
Bst4CI ACNGT 1 cut(s) 616
BstC8I GCNNGC 2 cut(s) 444, 596
BstENI CCTNNNNNAGG 1 cut(s) 307
BstF5I GGATG 1 cut(s) 19
BstKTI GATC 1 cut(s) 434
BstMAI GTCTC 2 cut(s) 279, 481
BstMBI GATC 1 cut(s) 431
BstMCI CGRYCG 1 cut(s) 485
BstNI CCWGG 1 cut(s) 582
BstNSI RCATGY 1 cut(s) 193
BstSCI CCNGG 1 cut(s) 580
BsuRI GGCC 1 cut(s) 622
BtsCI GGATG 1 cut(s) 19
BtsIMutI CAGTG 2 cut(s) 352, 621
Cac8I GCNNGC 2 cut(s) 444, 596
CviAII CATG 2 cut(s) 190, 247
CviJI RGCY 4 cut(s) 442, 446, 498, 622
CviKI_1 RGCY 4 cut(s) 442, 446, 498, 622
DpnI GATC 1 cut(s) 433
DpnII GATC 1 cut(s) 431
DraIII CACNNNGTG 1 cut(s) 179
EaeI YGGCCR 1 cut(s) 620
Eco31I GGTCTC 1 cut(s) 481
EcoNI CCTNNNNNAGG 1 cut(s) 307
EcoRI GAATTC 1 cut(s) 633
EcoRII CCWGG 1 cut(s) 580
FaeI CATG 2 cut(s) 193, 250
FatI CATG 2 cut(s) 189, 246
Fnu4HI GCNGC 1 cut(s) 620
FokI GGATG 1 cut(s) 26
Fsp4HI GCNGC 1 cut(s) 620
FspBI CTAG 3 cut(s) 354, 407, 443
GluI GCNGC 1 cut(s) 620
HaeIII GGCC 1 cut(s) 622
Hin1II CATG 2 cut(s) 193, 250
HinfI GANTC 9 cut(s) 73, 113, 212, 225, 272, 299, 419, 506, 550
HphI GGTGA 1 cut(s) 139
Hpy188III TCNNGA 4 cut(s) 117, 174, 296, 416
HpyAV CCTTC 2 cut(s) 421, 577
HpyCH4III ACNGT 1 cut(s) 616
HpyCH4IV ACGT 1 cut(s) 26
HpyCH4V TGCA 3 cut(s) 21, 250, 518
HpySE526I ACGT 1 cut(s) 26
Hsp92II CATG 2 cut(s) 193, 250
Kzo9I GATC 1 cut(s) 431
LpnPI CCDG 8 cut(s) 24, 71, 265, 320, 344, 567, 594, 623
MaeI CTAG 3 cut(s) 354, 407, 443
MaeII ACGT 1 cut(s) 26
MalI GATC 1 cut(s) 433
MboI GATC 1 cut(s) 431
MboII GAAGA 1 cut(s) 74
MluCI AATT 5 cut(s) 134, 217, 327, 389, 633
MlyI GAGTC 3 cut(s) 67, 281, 515
MnlI CCTC 3 cut(s) 103, 303, 501
MseI TTAA 2 cut(s) 54, 308
MspR9I CCNGG 1 cut(s) 582
MvaI CCWGG 1 cut(s) 582
NdeII GATC 1 cut(s) 431
NheI GCTAGC 1 cut(s) 442
NlaIII CATG 2 cut(s) 193, 250
NspI RCATGY 1 cut(s) 193
PciI ACATGT 1 cut(s) 189
PfeI GAWTC 6 cut(s) 113, 212, 225, 299, 419, 550
PkrI GCNGC 1 cut(s) 621
PleI GAGTC 3 cut(s) 67, 280, 514
PpsI GAGTC 3 cut(s) 67, 280, 514
PscI ACATGT 1 cut(s) 189
PshBI ATTAAT 1 cut(s) 54
Psp6I CCWGG 1 cut(s) 580
PspGI CCWGG 1 cut(s) 580
SaqAI TTAA 2 cut(s) 54, 308
SatI GCNGC 1 cut(s) 620
Sau3AI GATC 1 cut(s) 431
SchI GAGTC 3 cut(s) 67, 281, 515
ScrFI CCNGG 1 cut(s) 582
SetI ASST 9 cut(s) 29, 284, 382, 444, 448, 493, 500, 586, 642
Sse9I AATT 5 cut(s) 134, 217, 327, 389, 633
SsiI CCGC 2 cut(s) 592, 619
SspMI CTAG 3 cut(s) 354, 407, 443
StyD4I CCNGG 1 cut(s) 580
TaaI ACNGT 1 cut(s) 616
TaiI ACGT 1 cut(s) 29
TaqI TCGA 4 cut(s) 481, 509, 525, 545
TaqII GACCGA 1 cut(s) 499
TasI AATT 5 cut(s) 134, 217, 327, 389, 633
TauI GCSGC 1 cut(s) 622
TfiI GAWTC 6 cut(s) 113, 212, 225, 299, 419, 550
Tru1I TTAA 2 cut(s) 54, 308
Tru9I TTAA 2 cut(s) 54, 308
TscAI CASTG 2 cut(s) 352, 621
TspDTI ATGAA 3 cut(s) 235, 460, 593
TspGWI ACGGA 1 cut(s) 113
TspRI CASTG 2 cut(s) 352, 621
VspI ATTAAT 1 cut(s) 54
XagI CCTNNNNNAGG 1 cut(s) 307
XapI RAATTY 1 cut(s) 633
XceI RCATGY 1 cut(s) 193
XspI CTAG 3 cut(s) 354, 407, 443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.