Rh5DG178200

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
19677666 .. 19684798
7133 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG178200.1

Sequence Viewer

Length: 1551 bp
ATGAGTACTACAGCATTCCCAGTATTCATTGTTTCAGGCTTTGTTTTTCTGTTCCTTCTGATCTTCAAGATCTATCACACACAATGGCAGACTCCCACTCGCCTACAGAAACTGATGGCTCTGCAGGGAATCAAGGGCCCTTCTTACAGACCTGTCTATGGAAACGCCAAAGAAATCTGGAACTTAAAGAAGGAGGCCATGAGCAGACCCAAAGGTTTATCACATGACATACTTCCTGTAGTTGAACCTCAGTATCACTCGTGGCTTAAGATATATGGGAATATTTTTCTTCAGTGGTTAGGTACCAAAGCTCAGTTGGTAGTTATGGAACCAAAGTTGTGCAAAGAGATACTGAATAACAAAGACAGAGTTTATCGGCAAGTGCAACAACAAGGGATTGGGAAGAGGCTGTTAGGAAACAGCCTCGGGACTTCTGAAGGAGAACAATGGCTAAAACTTCGTAAGTTGGCCAACCATGCCTTCCATGGAGAGAGGTTAAAAAATATGGTTCCAGATATGATAGCTAGTGCTGAGAAGATGCTGCAAAGGTTGCAAAATAGAGAGGACAAAGAGATCGAGATGTACCAAGAATTTAAGTTGTTTACTTCAGAAGTGATTGCCAAAACAACATTTGGCAGCAGCTATTTAGAAGGGAAGAAAATTTTCGACATGTTGACGGAGTTATCTGTGTTACTGTTCAAAAATTCTTATAACATCAGGCTTCCCGGTATCCGAAAGCTTTTTAAAACTAGTGATGAATTGATTCAAGCAGAAAAGCTTGAGAAGGAAATACGTGACATGATATTGGAGACTGTAAAGAAAAGAGAAAACAAGGCAGTGAGTCAGCAAGATGAACACAACTTTGGGGGGGATTTTCTTGGATTACTTTTAAAGGCTCATCATGATGACAGTAATGACGAATATAGGGTCACGATAGATGATATAATTGATCAGTGTAAGGCAATGTACTTTGCTGGACAAGAAACCACTAATGGTTTGCTGGTTTGGACCGTGTTTCTTCTGGCACTCCATCAGGATTGGCAAAAGGAAGCGAGAAAAGAAGTCCTGCATCTATTTGGAAAACATAATCCAAATTTCGATGGCATTTCCAGACTAAAAACTATGAATATGATCCTCAATGAGTCTCTAAGGTTATATCCTCCTGTCAGTCAACTTACAAAGATTACTGAAAGGGAAAGCAGGCTGGGGAAGTTGATTGTTCCTGCTAATATTGATGTAGTCATCCCAACTTTAGCACTTCACCATGACCCTCAAACATGGGGACAAGACGTGGAAGTTTTCAAACCAGAGCGGTTCTCAGAAGGGGTTGCTAAAGCTACCAAGGATAACATGGCTGCATTCATACCCTTTGGAATGGGACCTAGAATTTGTGTGGGTTTCAACCTTGCCACCACTGAAACTAAGATTGCTCTGTCAATGATTCTGCAACGCTACTCCTTCACTCTTTCCCCAGGTTACGTCCACTCTCCTCTTCATTTTCTTACAACTCGCCCACAGCATGGAGTTCAAGTAATGCTACACTCCCTGTGA

Protein Analysis

516

Amino Acids

59.36

Weight (kDa)

9.23

Isoelectric Point (pI)

35.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 90 - 493 3.5e-76 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 711
Acc65I GGTACC 1 cut(s) 302
AccB1I GGYRCC 1 cut(s) 302
AccB7I CCANNNNNTGG 1 cut(s) 1520
AccBSI CCGCTC 1 cut(s) 1312
AciI CCGC 1 cut(s) 1312
AclWI GGATC 1 cut(s) 1126
AcoI YGGCCR 1 cut(s) 468
AcsI RAATTY 5 cut(s) 590, 660, 703, 1093, 1386
AcuI CTGAAG 3 cut(s) 275, 456, 591
AfaI GTAC 4 cut(s) 7, 304, 584, 968
AfiI CCNNNNNNNGG 2 cut(s) 158, 1520
AflII CTTAAG 1 cut(s) 266
AflIII ACRYGT 1 cut(s) 669
AgsI TTSAA 7 cut(s) 67, 245, 700, 767, 1303, 1402, 1529
AhlI ACTAGT 1 cut(s) 749
AjiI CACGTC 1 cut(s) 1291
AjnI CCWGG 1 cut(s) 1471
AjuI GAANNNNNNNTTGG 4 cut(s) 464, 496, 846, 878
AluBI AGCT 6 cut(s) 311, 524, 642, 739, 778, 1337
AluI AGCT 6 cut(s) 311, 524, 642, 739, 778, 1337
Alw26I GTCTC 2 cut(s) 803, 1149
AlwI GGATC 1 cut(s) 1126
AlwNI CAGNNNCTG 1 cut(s) 112
Ama87I CYCGRG 1 cut(s) 425
AoxI GGCC 3 cut(s) 136, 195, 468
ApaI GGGCCC 1 cut(s) 140
ApeKI GCWGC 4 cut(s) 541, 636, 639, 1355
ApoI RAATTY 5 cut(s) 590, 660, 703, 1093, 1386
ArsI GACNNNNNNTTYG 4 cut(s) 912, 944, 1371, 1403
Asp700I GAANNNNTTC 2 cut(s) 662, 762
Asp718I GGTACC 1 cut(s) 302
AspS9I GGNCC 4 cut(s) 136, 137, 1008, 1379
AsuC2I CCSGG 1 cut(s) 726
AsuHPI GGTGA 1 cut(s) 1253
AvaI CYCGRG 1 cut(s) 425
AvaII GGWCC 2 cut(s) 1008, 1379
BaeGI GKGCMC 1 cut(s) 140
BaeI ACNNNNGTAYC 2 cut(s) 236, 269
BalI TGGCCA 1 cut(s) 470
BanI GGYRCC 1 cut(s) 302
BanII GRGCYC 1 cut(s) 140
BauI CACGAG 1 cut(s) 259
BbvI GCAGC 4 cut(s) 528, 648, 651, 1342
BccI CCATC 3 cut(s) 109, 1038, 1094
BciT130I CCWGG 1 cut(s) 1473
BciVI GTATCC 1 cut(s) 740
BclI TGATCA 1 cut(s) 949
BcnI CCSGG 1 cut(s) 726
BcoDI GTCTC 2 cut(s) 803, 1149
BcuI ACTAGT 1 cut(s) 749
BfaI CTAG 3 cut(s) 525, 750, 1383
BfmI CTRYAG 4 cut(s) 9, 104, 122, 237
BfrI CTTAAG 1 cut(s) 266
BfuI GTATCC 1 cut(s) 740
BglII AGATCT 1 cut(s) 69
BisI GCNGC 4 cut(s) 542, 637, 640, 1356
BlsI GCNGC 4 cut(s) 543, 638, 641, 1357
BmcAI AGTACT 1 cut(s) 7
Bme1390I CCNGG 2 cut(s) 726, 1473
Bme18I GGWCC 2 cut(s) 1008, 1379
BmeT110I CYCGRG 1 cut(s) 425
BmgBI CACGTC 1 cut(s) 1291
BmgT120I GGNCC 4 cut(s) 136, 137, 1008, 1379
BmiI GGNNCC 5 cut(s) 138, 304, 330, 510, 1380
BmrFI CCNGG 2 cut(s) 726, 1473
BmrI ACTGGG 1 cut(s) 14
BmsI GCATC 2 cut(s) 528, 1078
BmuI ACTGGG 1 cut(s) 14
BplI GAGNNNNNCTC 2 cut(s) 1301, 1333
BpuEI CTTGAG 1 cut(s) 800
BpuMI CCSGG 1 cut(s) 726
BsaAI YACGTR 1 cut(s) 794
BsaJI CCNNGG 4 cut(s) 424, 484, 1341, 1471
BsaXI ACNNNNNCTCC 2 cut(s) 1515, 1545
Bsc4I CCNNNNNNNGG 2 cut(s) 158, 1520
Bse1I ACTGG 1 cut(s) 20
Bse3DI GCAATG 1 cut(s) 969
BseBI CCWGG 1 cut(s) 1473
BseDI CCNNGG 4 cut(s) 424, 484, 1341, 1471
BseGI GGATG 1 cut(s) 1242
BseLI CCNNNNNNNGG 2 cut(s) 158, 1520
BseMI GCAATG 1 cut(s) 969
BseMII CTCAG 4 cut(s) 263, 326, 522, 1332
BseNI ACTGG 1 cut(s) 20
BseRI GAGGAG 1 cut(s) 1479
BseSI GKGCMC 1 cut(s) 140
BseXI GCAGC 4 cut(s) 528, 648, 651, 1342
BseYI CCCAGC 1 cut(s) 1204
BshFI GGCC 3 cut(s) 138, 197, 470
BshNI GGYRCC 1 cut(s) 302
BsiHKCI CYCGRG 1 cut(s) 425
BsiSI CCGG 1 cut(s) 726
BslFI GGGAC 3 cut(s) 442, 1296, 1392
BslI CCNNNNNNNGG 2 cut(s) 158, 1520
BsmAI GTCTC 2 cut(s) 803, 1149
BsmFI GGGAC 3 cut(s) 442, 1296, 1392
BsmI GAATGC 2 cut(s) 14, 1358
BsnI GGCC 3 cut(s) 138, 197, 470
BsoBI CYCGRG 1 cut(s) 425
Bsp120I GGGCCC 1 cut(s) 136
Bsp1286I GDGCHC 1 cut(s) 140
Bsp143I GATC 5 cut(s) 60, 69, 573, 949, 1131
Bsp19I CCATGG 1 cut(s) 484
BspACI CCGC 1 cut(s) 1312
BspANI GGCC 3 cut(s) 138, 197, 470
BspCNI CTCAG 4 cut(s) 262, 325, 523, 1331
BspHI TCATGA 1 cut(s) 901
BspLI GGNNCC 5 cut(s) 138, 304, 330, 510, 1380
BspMAI CTGCAG 1 cut(s) 126
BspPI GGATC 1 cut(s) 1126
BspT107I GGYRCC 1 cut(s) 302
BspTI CTTAAG 1 cut(s) 266
BsrBI CCGCTC 1 cut(s) 1312
BsrDI GCAATG 1 cut(s) 969
BsrI ACTGG 1 cut(s) 20
BssECI CCNNGG 4 cut(s) 424, 484, 1341, 1471
BssMI GATC 5 cut(s) 60, 69, 573, 949, 1131
BssSI CACGAG 1 cut(s) 259
BssT1I CCWWGG 2 cut(s) 484, 1341
Bst2BI CACGAG 1 cut(s) 259
Bst2UI CCWGG 1 cut(s) 1473
Bst4CI ACNGT 4 cut(s) 696, 814, 911, 1012
Bst6I CTCTTC 2 cut(s) 398, 1497
BstAFI CTTAAG 1 cut(s) 266
BstAPI GCANNNNNTGC 1 cut(s) 550
BstBAI YACGTR 1 cut(s) 794
BstC8I GCNNGC 1 cut(s) 1202
BstDEI CTNAG 6 cut(s) 249, 312, 531, 1148, 1318, 1422
BstDSI CCRYGG 1 cut(s) 484
BstF5I GGATG 1 cut(s) 1242
BstKTI GATC 5 cut(s) 63, 72, 576, 952, 1134
BstMAI GTCTC 2 cut(s) 803, 1149
BstMBI GATC 5 cut(s) 60, 69, 573, 949, 1131
BstMWI GCNNNNNNNGC 2 cut(s) 476, 550
BstNI CCWGG 1 cut(s) 1473
BstNSI RCATGY 1 cut(s) 673
BstSCI CCNGG 2 cut(s) 724, 1471
BstSFI CTRYAG 4 cut(s) 9, 104, 122, 237
BstSLI GKGCMC 1 cut(s) 140
BstV1I GCAGC 4 cut(s) 528, 648, 651, 1342
BstX2I RGATCY 1 cut(s) 69
BstYI RGATCY 1 cut(s) 69
BsuI GTATCC 1 cut(s) 740
BsuRI GGCC 3 cut(s) 138, 197, 470
BtgI CCRYGG 1 cut(s) 484
BtrI CACGTC 1 cut(s) 1291
BtsCI GGATG 1 cut(s) 1242
BtsI GCAGTG 1 cut(s) 843
BtsIMutI CAGTG 4 cut(s) 299, 843, 959, 1413
Cac8I GCNNGC 1 cut(s) 1202
CaiI CAGNNNCTG 1 cut(s) 112
CciI TCATGA 1 cut(s) 901
Cfr13I GGNCC 4 cut(s) 136, 137, 1008, 1379
Csp6I GTAC 4 cut(s) 6, 303, 583, 967
CviQI GTAC 4 cut(s) 6, 303, 583, 967
DdeI CTNAG 6 cut(s) 249, 312, 531, 1148, 1318, 1422
DpnI GATC 5 cut(s) 62, 71, 575, 951, 1133
DpnII GATC 5 cut(s) 60, 69, 573, 949, 1131
DraI TTTAAA 2 cut(s) 745, 891
EaeI YGGCCR 1 cut(s) 468
Eam1104I CTCTTC 2 cut(s) 398, 1497
EarI CTCTTC 2 cut(s) 398, 1497
Eco130I CCWWGG 2 cut(s) 484, 1341
Eco24I GRGCYC 1 cut(s) 140
Eco47I GGWCC 2 cut(s) 1008, 1379
Eco57I CTGAAG 3 cut(s) 275, 456, 591
Eco88I CYCGRG 1 cut(s) 425
EcoO109I RGGNCCY 3 cut(s) 136, 137, 1379
EcoRII CCWGG 1 cut(s) 1471
EcoT14I CCWWGG 2 cut(s) 484, 1341
EcoT38I GRGCYC 1 cut(s) 140
ErhI CCWWGG 2 cut(s) 484, 1341
FaqI GGGAC 3 cut(s) 442, 1296, 1392
FbaI TGATCA 1 cut(s) 949
Fnu4HI GCNGC 4 cut(s) 542, 637, 640, 1356
FokI GGATG 1 cut(s) 1229
FriOI GRGCYC 1 cut(s) 140
Fsp4HI GCNGC 4 cut(s) 542, 637, 640, 1356
FspBI CTAG 3 cut(s) 525, 750, 1383
GluI GCNGC 4 cut(s) 542, 637, 640, 1356
GsaI CCCAGC 1 cut(s) 1208
HaeIII GGCC 3 cut(s) 138, 197, 470
HapII CCGG 1 cut(s) 726
HincII GTYRAC 2 cut(s) 675, 1172
HindII GTYRAC 2 cut(s) 675, 1172
HindIII AAGCTT 2 cut(s) 737, 776
HinfI GANTC 6 cut(s) 91, 129, 763, 841, 1142, 1441
HpaII CCGG 1 cut(s) 726
HphI GGTGA 1 cut(s) 1253
Hpy166II GTNNAC 4 cut(s) 603, 675, 1172, 1483
Hpy188I TCNGA 5 cut(s) 60, 436, 610, 734, 1321
Hpy188III TCNNGA 9 cut(s) 67, 178, 427, 512, 577, 902, 931, 1034, 1110
Hpy8I GTNNAC 4 cut(s) 603, 675, 1172, 1483
HpyAV CCTTC 9 cut(s) 65, 150, 184, 431, 490, 644, 778, 1316, 1468
HpyCH4III ACNGT 4 cut(s) 696, 814, 911, 1012
HpyCH4IV ACGT 3 cut(s) 793, 1290, 1479
HpyCH4V TGCA 8 cut(s) 124, 342, 385, 544, 553, 1069, 1358, 1447
HpyF10VI GCNNNNNNNGC 2 cut(s) 476, 550
HpyF3I CTNAG 6 cut(s) 249, 312, 531, 1148, 1318, 1422
HpySE526I ACGT 3 cut(s) 793, 1290, 1479
KpnI GGTACC 1 cut(s) 306
Ksp22I TGATCA 1 cut(s) 949
Kzo9I GATC 5 cut(s) 60, 69, 573, 949, 1131
Lsp1109I GCAGC 4 cut(s) 528, 648, 651, 1342
LweI GCATC 2 cut(s) 528, 1078
MaeI CTAG 3 cut(s) 525, 750, 1383
MaeII ACGT 3 cut(s) 793, 1290, 1479
MaeIII GTNAC 4 cut(s) 690, 794, 928, 1475
MalI GATC 5 cut(s) 62, 71, 575, 951, 1133
MbiI CCGCTC 1 cut(s) 1312
MboI GATC 5 cut(s) 60, 69, 573, 949, 1131
MboII GAAGA 7 cut(s) 55, 281, 415, 547, 667, 1010, 1484
MflI RGATCY 1 cut(s) 69
MhlI GDGCHC 1 cut(s) 140
MlsI TGGCCA 1 cut(s) 470
MluCI AATT 7 cut(s) 590, 660, 703, 758, 945, 1093, 1386
MluNI TGGCCA 1 cut(s) 470
MlyI GAGTC 3 cut(s) 85, 850, 1151
Mox20I TGGCCA 1 cut(s) 470
MroXI GAANNNNTTC 2 cut(s) 662, 762
MscI TGGCCA 1 cut(s) 470
MseI TTAA 6 cut(s) 185, 267, 497, 594, 744, 890
MslI CAYNNNNRTG 1 cut(s) 903
Msp20I TGGCCA 1 cut(s) 470
MspCI CTTAAG 1 cut(s) 266
MspI CCGG 1 cut(s) 726
MspR9I CCNGG 2 cut(s) 726, 1473
Mva1269I GAATGC 2 cut(s) 14, 1358
MvaI CCWGG 1 cut(s) 1473
MwoI GCNNNNNNNGC 2 cut(s) 476, 550
NciI CCSGG 1 cut(s) 726
NcoI CCATGG 1 cut(s) 484
NdeII GATC 5 cut(s) 60, 69, 573, 949, 1131
NlaIV GGNNCC 5 cut(s) 138, 304, 330, 510, 1380
NmuCI GTSAC 2 cut(s) 794, 928
NspI RCATGY 1 cut(s) 673
PagI TCATGA 1 cut(s) 901
PciI ACATGT 1 cut(s) 669
PctI GAATGC 2 cut(s) 14, 1358
PdmI GAANNNNTTC 2 cut(s) 662, 762
PfeI GAWTC 3 cut(s) 129, 763, 1441
PflMI CCANNNNNTGG 1 cut(s) 1520
PkrI GCNGC 4 cut(s) 543, 638, 641, 1357
PleI GAGTC 3 cut(s) 85, 849, 1150
PpsI GAGTC 3 cut(s) 85, 849, 1150
Ppu21I YACGTR 1 cut(s) 794
PpuMI RGGWCCY 1 cut(s) 1379
PscI ACATGT 1 cut(s) 669
PsiI TTATAA 1 cut(s) 711
Psp5II RGGWCCY 1 cut(s) 1379
Psp6I CCWGG 1 cut(s) 1471
PspFI CCCAGC 1 cut(s) 1204
PspGI CCWGG 1 cut(s) 1471
PspN4I GGNNCC 5 cut(s) 138, 304, 330, 510, 1380
PspOMI GGGCCC 1 cut(s) 136
PspPI GGNCC 4 cut(s) 136, 137, 1008, 1379
PspPPI RGGWCCY 1 cut(s) 1379
PstI CTGCAG 1 cut(s) 126
PstNI CAGNNNCTG 1 cut(s) 112
PsuI RGATCY 1 cut(s) 69
RsaI GTAC 4 cut(s) 7, 304, 584, 968
RsaNI GTAC 4 cut(s) 6, 303, 583, 967
RseI CAYNNNNRTG 1 cut(s) 903
SaqAI TTAA 6 cut(s) 185, 267, 497, 594, 744, 890
SatI GCNGC 4 cut(s) 542, 637, 640, 1356
Sau3AI GATC 5 cut(s) 60, 69, 573, 949, 1131
Sau96I GGNCC 4 cut(s) 136, 137, 1008, 1379
ScaI AGTACT 1 cut(s) 7
SchI GAGTC 3 cut(s) 85, 850, 1151
ScrFI CCNGG 2 cut(s) 726, 1473
SduI GDGCHC 1 cut(s) 140
SfaNI GCATC 2 cut(s) 528, 1078
SfcI CTRYAG 4 cut(s) 9, 104, 122, 237
SinI GGWCC 2 cut(s) 1008, 1379
SmiMI CAYNNNNRTG 1 cut(s) 903
SmlI CTYRAG 2 cut(s) 266, 779
SmoI CTYRAG 2 cut(s) 266, 779
SpeI ACTAGT 1 cut(s) 749
Sse9I AATT 7 cut(s) 590, 660, 703, 758, 945, 1093, 1386
SsiI CCGC 1 cut(s) 1312
SspI AATATT 2 cut(s) 283, 1231
SspMI CTAG 3 cut(s) 525, 750, 1383
StyD4I CCNGG 2 cut(s) 724, 1471
StyI CCWWGG 2 cut(s) 484, 1341
TaaI ACNGT 4 cut(s) 696, 814, 911, 1012
TaiI ACGT 3 cut(s) 796, 1293, 1482
TaqI TCGA 3 cut(s) 576, 666, 1098
TasI AATT 7 cut(s) 590, 660, 703, 758, 945, 1093, 1386
TatI WGTACW 2 cut(s) 5, 966
TfiI GAWTC 3 cut(s) 129, 763, 1441
Tru1I TTAA 6 cut(s) 185, 267, 497, 594, 744, 890
Tru9I TTAA 6 cut(s) 185, 267, 497, 594, 744, 890
TscAI CASTG 4 cut(s) 299, 843, 959, 1420
TseFI GTSAC 2 cut(s) 794, 928
TseI GCWGC 4 cut(s) 541, 636, 639, 1355
Tsp45I GTSAC 2 cut(s) 794, 928
TspDTI ATGAA 6 cut(s) 16, 771, 867, 1139, 1351, 1484
TspGWI ACGGA 1 cut(s) 692
TspRI CASTG 4 cut(s) 299, 843, 959, 1420
Van91I CCANNNNNTGG 1 cut(s) 1520
Vha464I CTTAAG 1 cut(s) 266
VpaK11BI GGWCC 2 cut(s) 1008, 1379
XapI RAATTY 5 cut(s) 590, 660, 703, 1093, 1386
XceI RCATGY 1 cut(s) 673
XcmI CCANNNNNNNNNTGG 3 cut(s) 313, 482, 1348
XmnI GAANNNNTTC 2 cut(s) 662, 762
XspI CTAG 3 cut(s) 525, 750, 1383
ZrmI AGTACT 1 cut(s) 7
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.