Rmu_sc0006986.1_g000003

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006986.1
Physical Location & Seq
Reverse (-)
11615 .. 12037
423 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006986.1_g000003.1.cds

Sequence Viewer

Length: 423 bp
atgatcttcaatgagtccctaaggctatattctccagctattaccgtcacaaggagagttgaaaaggatgttagaccgggaaagctcattgttcctgctaattttgagttgatcgtcccatatctggcgcttcaccacgagcctcagtcatggggacaagacgcccaacttttcaaaccagtgcgattctttgaaggagttgctaaagctactaacaacaacttaacttcatttatgccctttggaatgggacctagaatttgtgtgggcctcaacttcgccaccattgaagccaagattgctctatcaatgattctacagcgctactcctttaccctttccccaggttatgttcactcacccttaaggagtgtgacacttcgcccacagcatggagttcaagtaatgctacactcattgtga

Protein Analysis

140

Amino Acids

15.78

Weight (kDa)

9.91

Isoelectric Point (pI)

47.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 392
AcsI RAATTY 1 cut(s) 258
AcyI GRCGYC 1 cut(s) 162
AfeI AGCGCT 1 cut(s) 323
AfiI CCNNNNNNNGG 3 cut(s) 51, 124, 392
AflII CTTAAG 1 cut(s) 364
AgsI TTSAA 6 cut(s) 10, 62, 175, 194, 290, 401
AjnI CCWGG 1 cut(s) 343
AluBI AGCT 3 cut(s) 38, 85, 209
AluI AGCT 3 cut(s) 38, 85, 209
Aor51HI AGCGCT 1 cut(s) 323
AoxI GGCC 1 cut(s) 268
ApoI RAATTY 1 cut(s) 258
ArsI GACNNNNNNTTYG 2 cut(s) 243, 275
AspLEI GCGC 2 cut(s) 130, 324
AspS9I GGNCC 2 cut(s) 251, 268
AsuC2I CCSGG 1 cut(s) 78
AsuHPI GGTGA 2 cut(s) 125, 351
AvaII GGWCC 1 cut(s) 251
AxyI CCTNAGG 1 cut(s) 20
BauI CACGAG 1 cut(s) 137
BciT130I CCWGG 1 cut(s) 345
BcnI CCSGG 1 cut(s) 78
BfaI CTAG 1 cut(s) 255
BfmI CTRYAG 1 cut(s) 317
BfoI RGCGCY 2 cut(s) 131, 325
BfrI CTTAAG 1 cut(s) 364
Bme1390I CCNGG 2 cut(s) 78, 345
Bme18I GGWCC 1 cut(s) 251
BmgT120I GGNCC 2 cut(s) 251, 268
BmiI GGNNCC 1 cut(s) 252
BmrFI CCNGG 2 cut(s) 78, 345
BpmI CTGGAG 1 cut(s) 18
BpuMI CCSGG 1 cut(s) 78
BsaHI GRCGYC 1 cut(s) 162
BsaJI CCNNGG 1 cut(s) 343
BsaXI ACNNNNNCTCC 2 cut(s) 387, 417
Bsc4I CCNNNNNNNGG 3 cut(s) 51, 124, 392
Bse1I ACTGG 1 cut(s) 179
Bse21I CCTNAGG 1 cut(s) 20
BseBI CCWGG 1 cut(s) 345
BseDI CCNNGG 1 cut(s) 343
BseGI GGATG 1 cut(s) 73
BseLI CCNNNNNNNGG 3 cut(s) 51, 124, 392
BseMII CTCAG 1 cut(s) 158
BseNI ACTGG 1 cut(s) 179
BshFI GGCC 1 cut(s) 270
BsiSI CCGG 1 cut(s) 77
BslFI GGGAC 3 cut(s) 101, 168, 264
BslI CCNNNNNNNGG 3 cut(s) 51, 124, 392
BsmFI GGGAC 3 cut(s) 101, 168, 264
BsnI GGCC 1 cut(s) 270
Bsp143I GATC 2 cut(s) 3, 111
BspANI GGCC 1 cut(s) 270
BspCNI CTCAG 1 cut(s) 157
BspLI GGNNCC 1 cut(s) 252
BspTI CTTAAG 1 cut(s) 364
BsrI ACTGG 1 cut(s) 179
BssECI CCNNGG 1 cut(s) 343
BssMI GATC 2 cut(s) 3, 111
BssNI GRCGYC 1 cut(s) 162
BssSI CACGAG 1 cut(s) 137
Bst2BI CACGAG 1 cut(s) 137
Bst2UI CCWGG 1 cut(s) 345
Bst4CI ACNGT 1 cut(s) 46
BstACI GRCGYC 1 cut(s) 162
BstAFI CTTAAG 1 cut(s) 364
BstDEI CTNAG 2 cut(s) 20, 144
BstF5I GGATG 1 cut(s) 73
BstH2I RGCGCY 2 cut(s) 131, 325
BstHHI GCGC 2 cut(s) 130, 324
BstKTI GATC 2 cut(s) 6, 114
BstMBI GATC 2 cut(s) 3, 111
BstMWI GCNNNNNNNGC 1 cut(s) 299
BstNI CCWGG 1 cut(s) 345
BstSCI CCNGG 2 cut(s) 76, 343
BstSFI CTRYAG 1 cut(s) 317
Bsu36I CCTNAGG 1 cut(s) 20
BsuRI GGCC 1 cut(s) 270
BtsCI GGATG 1 cut(s) 73
BtsIMutI CAGTG 1 cut(s) 186
CfoI GCGC 2 cut(s) 130, 324
Cfr13I GGNCC 2 cut(s) 251, 268
CseI GACGC 1 cut(s) 170
CviAII CATG 2 cut(s) 150, 392
CviJI RGCY 7 cut(s) 25, 38, 85, 142, 209, 270, 293
CviKI_1 RGCY 7 cut(s) 25, 38, 85, 142, 209, 270, 293
DdeI CTNAG 2 cut(s) 20, 144
DpnI GATC 2 cut(s) 5, 113
DpnII GATC 2 cut(s) 3, 111
Eco47I GGWCC 1 cut(s) 251
Eco47III AGCGCT 1 cut(s) 323
Eco81I CCTNAGG 1 cut(s) 20
EcoO109I RGGNCCY 1 cut(s) 251
EcoRII CCWGG 1 cut(s) 343
FaeI CATG 2 cut(s) 153, 395
FaiI YATR 6 cut(s) 28, 121, 151, 236, 351, 393
FaqI GGGAC 3 cut(s) 101, 168, 264
FatI CATG 2 cut(s) 149, 391
FokI GGATG 1 cut(s) 80
FspBI CTAG 1 cut(s) 255
GlaI GCGC 2 cut(s) 129, 323
GsuI CTGGAG 1 cut(s) 18
HaeII RGCGCY 2 cut(s) 131, 325
HaeIII GGCC 1 cut(s) 270
HapII CCGG 1 cut(s) 77
HgaI GACGC 1 cut(s) 170
HhaI GCGC 2 cut(s) 130, 324
Hin1I GRCGYC 1 cut(s) 162
Hin1II CATG 2 cut(s) 153, 395
Hin6I GCGC 2 cut(s) 128, 322
HinP1I GCGC 2 cut(s) 128, 322
HinfI GANTC 3 cut(s) 14, 186, 313
HpaII CCGG 1 cut(s) 77
HphI GGTGA 2 cut(s) 125, 351
Hpy166II GTNNAC 1 cut(s) 355
Hpy8I GTNNAC 1 cut(s) 355
HpyAV CCTTC 1 cut(s) 188
HpyCH4III ACNGT 1 cut(s) 46
HpyF10VI GCNNNNNNNGC 1 cut(s) 299
HpyF3I CTNAG 2 cut(s) 20, 144
Hsp92I GRCGYC 1 cut(s) 162
Hsp92II CATG 2 cut(s) 153, 395
HspAI GCGC 2 cut(s) 128, 322
Kzo9I GATC 2 cut(s) 3, 111
LpnPI CCDG 7 cut(s) 48, 90, 108, 110, 192, 330, 357
MaeI CTAG 1 cut(s) 255
MaeIII GTNAC 2 cut(s) 46, 373
MalI GATC 2 cut(s) 5, 113
MboI GATC 2 cut(s) 3, 111
MluCI AATT 2 cut(s) 100, 258
MlyI GAGTC 1 cut(s) 23
MnlI CCTC 2 cut(s) 153, 281
MseI TTAA 2 cut(s) 224, 365
MspCI CTTAAG 1 cut(s) 364
MspI CCGG 1 cut(s) 77
MspR9I CCNGG 2 cut(s) 78, 345
MvaI CCWGG 1 cut(s) 345
MwoI GCNNNNNNNGC 1 cut(s) 299
NciI CCSGG 1 cut(s) 78
NdeII GATC 2 cut(s) 3, 111
NlaIII CATG 2 cut(s) 153, 395
NlaIV GGNNCC 1 cut(s) 252
NmuCI GTSAC 2 cut(s) 46, 373
PfeI GAWTC 2 cut(s) 186, 313
PflMI CCANNNNNTGG 1 cut(s) 392
PleI GAGTC 1 cut(s) 22
PpsI GAGTC 1 cut(s) 22
PpuMI RGGWCCY 1 cut(s) 251
Psp5II RGGWCCY 1 cut(s) 251
Psp6I CCWGG 1 cut(s) 343
PspGI CCWGG 1 cut(s) 343
PspN4I GGNNCC 1 cut(s) 252
PspPI GGNCC 2 cut(s) 251, 268
PspPPI RGGWCCY 1 cut(s) 251
SaqAI TTAA 2 cut(s) 224, 365
Sau3AI GATC 2 cut(s) 3, 111
Sau96I GGNCC 2 cut(s) 251, 268
SchI GAGTC 1 cut(s) 23
ScrFI CCNGG 2 cut(s) 78, 345
SetI ASST 5 cut(s) 40, 87, 211, 256, 349
SfcI CTRYAG 1 cut(s) 317
SinI GGWCC 1 cut(s) 251
SmlI CTYRAG 1 cut(s) 364
SmoI CTYRAG 1 cut(s) 364
Sse9I AATT 2 cut(s) 100, 258
SspMI CTAG 1 cut(s) 255
StyD4I CCNGG 2 cut(s) 76, 343
TaaI ACNGT 1 cut(s) 46
TasI AATT 2 cut(s) 100, 258
TfiI GAWTC 2 cut(s) 186, 313
Tru1I TTAA 2 cut(s) 224, 365
Tru9I TTAA 2 cut(s) 224, 365
TscAI CASTG 1 cut(s) 186
TseFI GTSAC 2 cut(s) 46, 373
Tsp45I GTSAC 2 cut(s) 46, 373
TspDTI ATGAA 1 cut(s) 219
TspRI CASTG 1 cut(s) 186
Van91I CCANNNNNTGG 1 cut(s) 392
Vha464I CTTAAG 1 cut(s) 364
VpaK11BI GGWCC 1 cut(s) 251
XapI RAATTY 1 cut(s) 258
XspI CTAG 1 cut(s) 255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.