Rroxscaffold_5G00378760

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Reverse (-)
59206423 .. 59208347
1925 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00378760.1

Sequence Viewer

Length: 1542 bp
ATGATTTTAAGCTCTCTCTGTGTGTTGCTCCTCTTAGCTCTGATCAAGGCCTTTCACAAACTATGGTGGACTCCGACTCGCATTCAGAATCTGATGGCTCTGCAGGGAATCAAAGGTCCTTCTTACAGATTTCTCTATGGGAACGCCAAAGAAATTATTAGCATGCAAAACGAAGCGATGAGCAGGCCAATGAAATTATCACATGATATCTCTTCTCATGTTCAACCTCATATTCATGCATGGGCCAAGAGTTATGTCATTGCTGCTACACAGGGAGAAATTTTCTTCAATGCATGGTATGGTCCACAACCTGTTTTCGTTGTTACAGAACCTGAATTGTGCAAAGAGATCCTCCTTAGCAAAGATGGAGTTTATCCAAAACCAAAAGCTTCTAAACTTGTGAAGAAGCTAGTAGGAGATAGCATTTCGGTGACAGAAGGTGACAAATGGGAAAAGCTGAGAAAGCTGTCCAACCATGCCTTCCAAGGAGAGAGAGTAAAAAATATGTTTGCAGACATGAAGGCTAGTGCTGAGACGATGGTAGAGAGGTGGAAAGGTCATGAAGGGAAAGAGATTGATGTGGTTGAAGAATTTAGGTTGTACGCTTCAGAAGTAATTTCAAGGACAGCATTTGGCAGCAGCTACTTAGAAGGCAAGAACCTTTTTGAGAAGTTGTCAAAGTTAATCATCATAATCTTCCGGAATCTTTTCAAAATCAGGTTTCCTGGCATTAGTAAGGTGTTTAGAACCAGTGATGACATTGAATCAGACAAACTTGACAAAGGAATACGTGACTCCATAATGGATATTGTTAAGAAAAGAGAAAAGGAGGCAATCATTGGAGAAGAAGACAGCTTTGGGAGTGATTTTCTAGGATTGCTTTTGAAGGCTCATCATGGTACAAATGACAAGCAGAGGATTTCAACGGATGAATTGGTTGAGGAGTGCAGGACGTTTTACTTTGCTGGACAAGAGACCACCAATACTTTGCTTGCTTGGACTGTTGTTCTTCTGGCACTCCATACTGAATGGCAAGATGAAGCAAGAAAGGAGGTCCTGCAATTATTTGGTAAAGAAAATCCAACTTATGATGGCCTTGCCAAACTCAAAACTATGAGTATGATCATCAATGAGACTCTAAGGTTATATCCTCCTGCTGTTATGCTTATAAGGAAAGTTGCAAGGGAAGTTAGACTGGGAAAACTCCTAGTTCCTGCTGAAGTTGAATTGCTTGTCCCAACTCTAGCACTTCACCATGATCCTCAATTATGGGGACAAGATGCGACACTTTTCAAACCAGAGCGATTCTCTGAAGGGGTTGCTAAAGTTACTAATGATAACATGGCTGCATTCATGCCATTTGGATTGGGACCTAGAATATGTGTAGGCTTCAACTTTGCCACCATTGAAGCAAAGGTCGCTCTGTCAATGATTCTACAACGCTACTCATTTACCCTTTCCCCGGGTTATGTCCACTCGCCTTCTCAGTATCTCACTGTTTGCCCACAGCATGGAGTTCAAATATCTTTACACACACTTTGA

Protein Analysis

513

Amino Acids

58.15

Weight (kDa)

8.67

Isoelectric Point (pI)

31.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 95 - 496 7.2e-79 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1169
AccB7I CCANNNNNTGG 1 cut(s) 1511
AccIII TCCGGA 1 cut(s) 699
AclWI GGATC 2 cut(s) 343, 1253
AcsI RAATTY 2 cut(s) 279, 590
AcuI CTGAAG 3 cut(s) 591, 1239, 1332
AfaI GTAC 2 cut(s) 602, 901
AfiI CCNNNNNNNGG 2 cut(s) 1462, 1511
AjnI CCWGG 1 cut(s) 724
AjuI GAANNNNNNNTTGG 4 cut(s) 464, 496, 840, 872
AluBI AGCT 8 cut(s) 12, 38, 389, 409, 457, 466, 642, 855
AluI AGCT 8 cut(s) 12, 38, 389, 409, 457, 466, 642, 855
Alw26I GTCTC 3 cut(s) 527, 968, 1127
AlwI GGATC 2 cut(s) 343, 1253
AlwNI CAGNNNCTG 2 cut(s) 91, 332
Ama87I CYCGRG 1 cut(s) 1462
Aor13HI TCCGGA 1 cut(s) 699
AoxI GGCC 4 cut(s) 48, 185, 243, 1093
ApeKI GCWGC 4 cut(s) 263, 636, 639, 1346
ApoI RAATTY 2 cut(s) 279, 590
Asp700I GAANNNNTTC 1 cut(s) 707
AspS9I GGNCC 5 cut(s) 116, 243, 302, 1054, 1370
AsuC2I CCSGG 2 cut(s) 1463, 1464
AsuHPI GGTGA 3 cut(s) 442, 452, 1244
AvaI CYCGRG 1 cut(s) 1462
AvaII GGWCC 4 cut(s) 116, 302, 1054, 1370
BbsI GAAGAC 1 cut(s) 855
BbvI GCAGC 4 cut(s) 250, 648, 651, 1333
BccI CCATC 4 cut(s) 88, 359, 532, 1085
BciT130I CCWGG 1 cut(s) 726
BclI TGATCA 2 cut(s) 42, 1122
BcnI CCSGG 2 cut(s) 1463, 1464
BcoDI GTCTC 3 cut(s) 527, 968, 1127
BfaI CTAG 6 cut(s) 410, 525, 872, 1208, 1244, 1374
BfmI CTRYAG 1 cut(s) 101
BisI GCNGC 4 cut(s) 264, 637, 640, 1347
BlsI GCNGC 4 cut(s) 265, 638, 641, 1348
Bme1390I CCNGG 3 cut(s) 726, 1463, 1464
Bme18I GGWCC 4 cut(s) 116, 302, 1054, 1370
BmeT110I CYCGRG 1 cut(s) 1462
BmgT120I GGNCC 5 cut(s) 116, 243, 302, 1054, 1370
BmiI GGNNCC 1 cut(s) 1371
BmrFI CCNGG 3 cut(s) 726, 1463, 1464
BmrI ACTGGG 1 cut(s) 1205
BmsI GCATC 1 cut(s) 1270
BmuI ACTGGG 1 cut(s) 1205
BpiI GAAGAC 1 cut(s) 855
BplI GAGNNNNNCTC 2 cut(s) 1292, 1324
Bpu10I CCTNAGC 1 cut(s) 356
BpuMI CCSGG 2 cut(s) 1463, 1464
BsaAI YACGTR 1 cut(s) 791
BsaI GGTCTC 1 cut(s) 968
BsaJI CCNNGG 3 cut(s) 484, 1461, 1462
BsaWI WCCGGW 1 cut(s) 699
BsaXI ACNNNNNCTCC 2 cut(s) 480, 510
Bsc4I CCNNNNNNNGG 2 cut(s) 1462, 1511
Bse1I ACTGG 2 cut(s) 750, 1200
Bse3DI GCAATG 1 cut(s) 258
BseAI TCCGGA 1 cut(s) 699
BseBI CCWGG 1 cut(s) 726
BseDI CCNNGG 3 cut(s) 484, 1461, 1462
BseGI GGATG 1 cut(s) 934
BseLI CCNNNNNNNGG 2 cut(s) 1462, 1511
BseMI GCAATG 1 cut(s) 258
BseMII CTCAG 3 cut(s) 449, 522, 1499
BseNI ACTGG 2 cut(s) 750, 1200
BseRI GAGGAG 2 cut(s) 20, 956
BseXI GCAGC 4 cut(s) 250, 648, 651, 1333
BsgI GTGCAG 1 cut(s) 967
BshFI GGCC 4 cut(s) 50, 187, 245, 1095
BsiHKCI CYCGRG 1 cut(s) 1462
BsiSI CCGG 2 cut(s) 700, 1463
BslFI GGGAC 3 cut(s) 1220, 1287, 1383
BslI CCNNNNNNNGG 2 cut(s) 1462, 1511
BsmAI GTCTC 3 cut(s) 527, 968, 1127
BsmBI CGTCTC 1 cut(s) 527
BsmFI GGGAC 3 cut(s) 1220, 1287, 1383
BsmI GAATGC 2 cut(s) 81, 1349
BsnI GGCC 4 cut(s) 50, 187, 245, 1095
Bso31I GGTCTC 1 cut(s) 968
BsoBI CYCGRG 1 cut(s) 1462
Bsp13I TCCGGA 1 cut(s) 699
Bsp143I GATC 4 cut(s) 42, 348, 1122, 1258
BspANI GGCC 4 cut(s) 50, 187, 245, 1095
BspCNI CTCAG 3 cut(s) 450, 523, 1498
BspEI TCCGGA 1 cut(s) 699
BspHI TCATGA 1 cut(s) 559
BspLI GGNNCC 1 cut(s) 1371
BspMAI CTGCAG 1 cut(s) 105
BspPI GGATC 2 cut(s) 343, 1253
BspTNI GGTCTC 1 cut(s) 968
BsrDI GCAATG 1 cut(s) 258
BsrI ACTGG 2 cut(s) 750, 1200
BssECI CCNNGG 3 cut(s) 484, 1461, 1462
BssMI GATC 4 cut(s) 42, 348, 1122, 1258
BssT1I CCWWGG 1 cut(s) 484
Bst2UI CCWGG 1 cut(s) 726
Bst4CI ACNGT 2 cut(s) 1003, 1498
Bst6I CTCTTC 1 cut(s) 217
BstBAI YACGTR 1 cut(s) 791
BstC8I GCNNGC 3 cut(s) 164, 185, 993
BstDEI CTNAG 7 cut(s) 34, 356, 458, 531, 646, 1139, 1485
BstF5I GGATG 1 cut(s) 934
BstKTI GATC 4 cut(s) 45, 351, 1125, 1261
BstMAI GTCTC 3 cut(s) 527, 968, 1127
BstMBI GATC 4 cut(s) 42, 348, 1122, 1258
BstMWI GCNNNNNNNGC 2 cut(s) 463, 1418
BstNI CCWGG 1 cut(s) 726
BstNSI RCATGY 1 cut(s) 166
BstSCI CCNGG 3 cut(s) 724, 1461, 1462
BstSFI CTRYAG 1 cut(s) 101
BstV1I GCAGC 4 cut(s) 250, 648, 651, 1333
BstV2I GAAGAC 1 cut(s) 855
BstX2I RGATCY 1 cut(s) 348
BstYI RGATCY 1 cut(s) 348
BsuRI GGCC 4 cut(s) 50, 187, 245, 1095
BtgZI GCGATG 1 cut(s) 191
BtsCI GGATG 1 cut(s) 934
BtsIMutI CAGTG 2 cut(s) 757, 1494
Cac8I GCNNGC 3 cut(s) 164, 185, 993
CaiI CAGNNNCTG 2 cut(s) 91, 332
CciI TCATGA 1 cut(s) 559
Cfr13I GGNCC 5 cut(s) 116, 243, 302, 1054, 1370
Cfr9I CCCGGG 1 cut(s) 1462
Csp6I GTAC 2 cut(s) 601, 900
CviQI GTAC 2 cut(s) 601, 900
DdeI CTNAG 7 cut(s) 34, 356, 458, 531, 646, 1139, 1485
DpnI GATC 4 cut(s) 44, 350, 1124, 1260
DpnII GATC 4 cut(s) 42, 348, 1122, 1258
Eam1104I CTCTTC 1 cut(s) 217
EarI CTCTTC 1 cut(s) 217
Eco130I CCWWGG 1 cut(s) 484
Eco147I AGGCCT 1 cut(s) 50
Eco31I GGTCTC 1 cut(s) 968
Eco32I GATATC 1 cut(s) 208
Eco47I GGWCC 4 cut(s) 116, 302, 1054, 1370
Eco57I CTGAAG 3 cut(s) 591, 1239, 1332
Eco88I CYCGRG 1 cut(s) 1462
EcoO109I RGGNCCY 3 cut(s) 116, 1054, 1370
EcoRII CCWGG 1 cut(s) 724
EcoRV GATATC 1 cut(s) 208
EcoT14I CCWWGG 1 cut(s) 484
EcoT22I ATGCAT 2 cut(s) 241, 295
ErhI CCWWGG 1 cut(s) 484
Esp3I CGTCTC 1 cut(s) 527
FaqI GGGAC 3 cut(s) 1220, 1287, 1383
FbaI TGATCA 2 cut(s) 42, 1122
Fnu4HI GCNGC 4 cut(s) 264, 637, 640, 1347
FokI GGATG 1 cut(s) 941
Fsp4HI GCNGC 4 cut(s) 264, 637, 640, 1347
FspBI CTAG 6 cut(s) 410, 525, 872, 1208, 1244, 1374
GluI GCNGC 4 cut(s) 264, 637, 640, 1347
HaeIII GGCC 4 cut(s) 50, 187, 245, 1095
HapII CCGG 2 cut(s) 700, 1463
HindIII AAGCTT 1 cut(s) 387
HpaII CCGG 2 cut(s) 700, 1463
HphI GGTGA 3 cut(s) 442, 452, 1244
Hpy166II GTNNAC 3 cut(s) 69, 305, 1474
Hpy188I TCNGA 7 cut(s) 42, 75, 87, 93, 610, 769, 1312
Hpy188III TCNNGA 2 cut(s) 560, 700
Hpy8I GTNNAC 3 cut(s) 69, 305, 1474
HpyAV CCTTC 9 cut(s) 129, 431, 490, 514, 557, 644, 880, 1307, 1491
HpyCH4III ACNGT 2 cut(s) 1003, 1498
HpyCH4IV ACGT 2 cut(s) 790, 953
HpyF10VI GCNNNNNNNGC 2 cut(s) 463, 1418
HpyF3I CTNAG 7 cut(s) 34, 356, 458, 531, 646, 1139, 1485
HpySE526I ACGT 2 cut(s) 790, 953
Kpn2I TCCGGA 1 cut(s) 699
Ksp22I TGATCA 2 cut(s) 42, 1122
Kzo9I GATC 4 cut(s) 42, 348, 1122, 1258
LmnI GCTCC 1 cut(s) 33
Lsp1109I GCAGC 4 cut(s) 250, 648, 651, 1333
LweI GCATC 1 cut(s) 1270
MaeI CTAG 6 cut(s) 410, 525, 872, 1208, 1244, 1374
MaeII ACGT 2 cut(s) 790, 953
MaeIII GTNAC 5 cut(s) 322, 430, 440, 791, 1327
MalI GATC 4 cut(s) 44, 350, 1124, 1260
MboI GATC 4 cut(s) 42, 348, 1122, 1258
MboII GAAGA 8 cut(s) 204, 277, 415, 599, 688, 857, 860, 1001
MflI RGATCY 1 cut(s) 348
MlyI GAGTC 4 cut(s) 64, 70, 788, 1129
MmeI TCCRAC 3 cut(s) 98, 495, 1106
Mph1103I ATGCAT 2 cut(s) 241, 295
MroI TCCGGA 1 cut(s) 699
MroXI GAANNNNTTC 1 cut(s) 707
MseI TTAA 3 cut(s) 8, 683, 813
MslI CAYNNNNRTG 2 cut(s) 234, 428
MspI CCGG 2 cut(s) 700, 1463
MspR9I CCNGG 3 cut(s) 726, 1463, 1464
Mva1269I GAATGC 2 cut(s) 81, 1349
MvaI CCWGG 1 cut(s) 726
MwoI GCNNNNNNNGC 2 cut(s) 463, 1418
NciI CCSGG 2 cut(s) 1463, 1464
NdeII GATC 4 cut(s) 42, 348, 1122, 1258
NlaIV GGNNCC 1 cut(s) 1371
NmuCI GTSAC 3 cut(s) 430, 440, 791
NsiI ATGCAT 2 cut(s) 241, 295
NspI RCATGY 1 cut(s) 166
PaeI GCATGC 1 cut(s) 166
PagI TCATGA 1 cut(s) 559
PceI AGGCCT 1 cut(s) 50
PctI GAATGC 2 cut(s) 81, 1349
PdmI GAANNNNTTC 1 cut(s) 707
PfeI GAWTC 6 cut(s) 88, 108, 703, 764, 1305, 1432
PflMI CCANNNNNTGG 1 cut(s) 1511
PkrI GCNGC 4 cut(s) 265, 638, 641, 1348
PleI GAGTC 4 cut(s) 64, 70, 788, 1129
PpsI GAGTC 4 cut(s) 64, 70, 788, 1129
Ppu21I YACGTR 1 cut(s) 791
PpuMI RGGWCCY 3 cut(s) 116, 1054, 1370
PsiI TTATAA 1 cut(s) 1169
Psp5II RGGWCCY 3 cut(s) 116, 1054, 1370
Psp6I CCWGG 1 cut(s) 724
PspGI CCWGG 1 cut(s) 724
PspN4I GGNNCC 1 cut(s) 1371
PspPI GGNCC 5 cut(s) 116, 243, 302, 1054, 1370
PspPPI RGGWCCY 3 cut(s) 116, 1054, 1370
PstI CTGCAG 1 cut(s) 105
PstNI CAGNNNCTG 2 cut(s) 91, 332
PsuI RGATCY 1 cut(s) 348
RsaI GTAC 2 cut(s) 602, 901
RsaNI GTAC 2 cut(s) 601, 900
RseI CAYNNNNRTG 2 cut(s) 234, 428
SaqAI TTAA 3 cut(s) 8, 683, 813
SatI GCNGC 4 cut(s) 264, 637, 640, 1347
Sau3AI GATC 4 cut(s) 42, 348, 1122, 1258
Sau96I GGNCC 5 cut(s) 116, 243, 302, 1054, 1370
SchI GAGTC 4 cut(s) 64, 70, 788, 1129
ScrFI CCNGG 3 cut(s) 726, 1463, 1464
SfaNI GCATC 1 cut(s) 1270
SfcI CTRYAG 1 cut(s) 101
SinI GGWCC 4 cut(s) 116, 302, 1054, 1370
SmaI CCCGGG 1 cut(s) 1464
SmiMI CAYNNNNRTG 2 cut(s) 234, 428
SphI GCATGC 1 cut(s) 166
SseBI AGGCCT 1 cut(s) 50
SspMI CTAG 6 cut(s) 410, 525, 872, 1208, 1244, 1374
StuI AGGCCT 1 cut(s) 50
StyD4I CCNGG 3 cut(s) 724, 1461, 1462
StyI CCWWGG 1 cut(s) 484
TaaI ACNGT 2 cut(s) 1003, 1498
TaiI ACGT 2 cut(s) 793, 956
TfiI GAWTC 6 cut(s) 88, 108, 703, 764, 1305, 1432
Tru1I TTAA 3 cut(s) 8, 683, 813
Tru9I TTAA 3 cut(s) 8, 683, 813
TscAI CASTG 2 cut(s) 757, 1501
TseFI GTSAC 3 cut(s) 430, 440, 791
TseI GCWGC 4 cut(s) 263, 636, 639, 1346
Tsp45I GTSAC 3 cut(s) 430, 440, 791
TspDTI ATGAA 7 cut(s) 206, 224, 533, 576, 945, 1053, 1342
TspGWI ACGGA 1 cut(s) 941
TspMI CCCGGG 1 cut(s) 1462
TspRI CASTG 2 cut(s) 757, 1501
Van91I CCANNNNNTGG 1 cut(s) 1511
VpaK11BI GGWCC 4 cut(s) 116, 302, 1054, 1370
XapI RAATTY 2 cut(s) 279, 590
XceI RCATGY 1 cut(s) 166
XmaI CCCGGG 1 cut(s) 1462
XmnI GAANNNNTTC 1 cut(s) 707
XspI CTAG 6 cut(s) 410, 525, 872, 1208, 1244, 1374
Zsp2I ATGCAT 2 cut(s) 241, 295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.