FvH4_4g29160

cytochrome P450

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
29420612 .. 29421594
983 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g29160.t1

Sequence Viewer

Length: 831 bp
ATGGAACACAATTATTGCAGTCGCTTTATCAAAAACAAAGATGAGATTGAATCAGAGAAGCTTGTAGAAAGAATACACGACTCCATATTAGAGATTGTTAAGAAAAGAGAAGAGCAGGCCATGACCATGAGTGATGAAGAAGACAGATTTGGAGGTGATTTTATTGGATTGCTTTTAAAGGCTCGCCATGATCCGAATGTGAACATTACAGTGGATGATGTAATAGATGAGTGCAAAACATTCTACTTTGCTGGACAAGAAACCACCAATACATTGCTAGCTTGGACTATCTTACTTCTGGCACTTCATCCTGAGTGGCAAGAGGAAGCAAGAAGAGAAGTTCTGCAGTTGTTTGGCAAACAAACAACTCCAAATTCTGATGGCATTGCCAAACTCAAAACGATGAGTATGATCCTCAATGAGACTCTAAGGTTATATCCTCCTGTTGTTTCTATAATAAGGAGAGTCAAAAAGGATGTTAGACTCGGAAAAATCATTGTTCCTGCTAATGTTGAACTGCAGGTCCCAAATCTAGCATTTCATCATGATCCTCAACTTTGGGGAGATGATGTACATCTTTTCAAGCCAGAGAGGTTCTCAGAAGGGGTTGCTAAAGCTACTAACAATAACATGGTCGCATACTTACCTTTCGGAATGGGACCTAGAAATTGTATTGGATTCAACTTTGCCACCACAGAAGCAAAGATTGCTCTTTCGATGATTCTACAACGCTACTCCTTCACCCTTTCCCCAGGTTATGTTCACTCACCTTTTAGATATATTACAGTTCGCCCGCAGCATGGAGTTCAAGTAATGCTACACCCTCTCTGA

Protein Analysis

277

Amino Acids

31.68

Weight (kDa)

6.37

Isoelectric Point (pI)

49.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 9 - 252 3.7e-57 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 511
AciI CCGC 1 cut(s) 794
AclWI GGATC 3 cut(s) 185, 406, 542
AcsI RAATTY 1 cut(s) 373
AfaI GTAC 1 cut(s) 573
AfiI CCNNNNNNNGG 1 cut(s) 800
AgsI TTSAA 5 cut(s) 50, 515, 583, 682, 809
AjnI CCWGG 1 cut(s) 751
AjuI GAANNNNNNNTTGG 2 cut(s) 132, 164
AloI GAACNNNNNNTCC 2 cut(s) 507, 539
AluBI AGCT 3 cut(s) 61, 281, 617
AluI AGCT 3 cut(s) 61, 281, 617
Alw26I GTCTC 1 cut(s) 416
AlwI GGATC 3 cut(s) 185, 406, 542
AoxI GGCC 1 cut(s) 117
ApeKI GCWGC 1 cut(s) 796
ApoI RAATTY 1 cut(s) 373
AspS9I GGNCC 2 cut(s) 523, 659
AsuHPI GGTGA 3 cut(s) 167, 733, 759
AsuNHI GCTAGC 1 cut(s) 277
AvaII GGWCC 2 cut(s) 523, 659
BbsI GAAGAC 1 cut(s) 147
BbvI GCAGC 1 cut(s) 808
BccI CCATC 1 cut(s) 374
BciT130I CCWGG 1 cut(s) 753
BcoDI GTCTC 1 cut(s) 416
BfaI CTAG 3 cut(s) 278, 533, 663
BfmI CTRYAG 2 cut(s) 344, 518
BfuAI ACCTGC 1 cut(s) 511
BisI GCNGC 1 cut(s) 797
BlsI GCNGC 1 cut(s) 798
Bme1390I CCNGG 1 cut(s) 753
Bme18I GGWCC 2 cut(s) 523, 659
BmgT120I GGNCC 2 cut(s) 523, 659
BmiI GGNNCC 2 cut(s) 525, 660
BmrFI CCNGG 1 cut(s) 753
BmtI GCTAGC 1 cut(s) 281
BpiI GAAGAC 1 cut(s) 147
BplI GAGNNNNNCTC 2 cut(s) 581, 613
BsaBI GATNNNNATC 1 cut(s) 573
BsaJI CCNNGG 1 cut(s) 751
BsaXI ACNNNNNCTCC 4 cut(s) 555, 585, 795, 825
Bsc4I CCNNNNNNNGG 1 cut(s) 800
Bse3DI GCAATG 2 cut(s) 272, 384
Bse8I GATNNNNATC 1 cut(s) 573
BseBI CCWGG 1 cut(s) 753
BseDI CCNNGG 1 cut(s) 751
BseGI GGATG 3 cut(s) 220, 307, 481
BseJI GATNNNNATC 1 cut(s) 573
BseLI CCNNNNNNNGG 1 cut(s) 800
BseMI GCAATG 2 cut(s) 272, 384
BseMII CTCAG 2 cut(s) 303, 612
BseXI GCAGC 1 cut(s) 808
BshFI GGCC 1 cut(s) 119
BslFI GGGAC 2 cut(s) 509, 672
BslI CCNNNNNNNGG 1 cut(s) 800
BsmAI GTCTC 1 cut(s) 416
BsmFI GGGAC 2 cut(s) 509, 672
BsnI GGCC 1 cut(s) 119
Bsp1407I TGTACA 1 cut(s) 571
Bsp143I GATC 3 cut(s) 190, 411, 547
BspACI CCGC 1 cut(s) 794
BspANI GGCC 1 cut(s) 119
BspCNI CTCAG 2 cut(s) 304, 611
BspHI TCATGA 1 cut(s) 544
BspLI GGNNCC 2 cut(s) 525, 660
BspMAI CTGCAG 2 cut(s) 348, 522
BspMI ACCTGC 1 cut(s) 511
BspOI GCTAGC 1 cut(s) 281
BspPI GGATC 3 cut(s) 185, 406, 542
BspQI GCTCTTC 1 cut(s) 105
BsrDI GCAATG 2 cut(s) 272, 384
BsrGI TGTACA 1 cut(s) 571
BssECI CCNNGG 1 cut(s) 751
BssMI GATC 3 cut(s) 190, 411, 547
Bst2UI CCWGG 1 cut(s) 753
Bst4CI ACNGT 2 cut(s) 211, 787
Bst6I CTCTTC 2 cut(s) 105, 328
BstAPI GCANNNNNTGC 1 cut(s) 707
BstAUI TGTACA 1 cut(s) 571
BstC8I GCNNGC 4 cut(s) 117, 184, 279, 794
BstDEI CTNAG 3 cut(s) 312, 428, 598
BstF5I GGATG 3 cut(s) 220, 307, 481
BstKTI GATC 3 cut(s) 193, 414, 550
BstMAI GTCTC 1 cut(s) 416
BstMBI GATC 3 cut(s) 190, 411, 547
BstMWI GCNNNNNNNGC 1 cut(s) 707
BstNI CCWGG 1 cut(s) 753
BstSCI CCNGG 1 cut(s) 751
BstSFI CTRYAG 2 cut(s) 344, 518
BstV1I GCAGC 1 cut(s) 808
BstV2I GAAGAC 1 cut(s) 147
BsuRI GGCC 1 cut(s) 119
BtsCI GGATG 3 cut(s) 220, 307, 481
BtsIMutI CAGTG 1 cut(s) 216
BveI ACCTGC 1 cut(s) 511
Cac8I GCNNGC 4 cut(s) 117, 184, 279, 794
CciI TCATGA 1 cut(s) 544
Cfr13I GGNCC 2 cut(s) 523, 659
Csp6I GTAC 1 cut(s) 572
CviAII CATG 6 cut(s) 121, 127, 188, 545, 631, 800
CviJI RGCY 6 cut(s) 61, 119, 182, 281, 586, 617
CviKI_1 RGCY 6 cut(s) 61, 119, 182, 281, 586, 617
CviQI GTAC 1 cut(s) 572
DdeI CTNAG 3 cut(s) 312, 428, 598
DpnI GATC 3 cut(s) 192, 413, 549
DpnII GATC 3 cut(s) 190, 411, 547
DraI TTTAAA 1 cut(s) 177
Eam1104I CTCTTC 2 cut(s) 105, 328
EarI CTCTTC 2 cut(s) 105, 328
Eco47I GGWCC 2 cut(s) 523, 659
EcoO109I RGGNCCY 2 cut(s) 523, 659
EcoRII CCWGG 1 cut(s) 751
FaeI CATG 6 cut(s) 124, 130, 191, 548, 634, 803
FaqI GGGAC 2 cut(s) 509, 672
FatI CATG 6 cut(s) 120, 126, 187, 544, 630, 799
FauI CCCGC 1 cut(s) 801
Fnu4HI GCNGC 1 cut(s) 797
FokI GGATG 3 cut(s) 227, 294, 488
Fsp4HI GCNGC 1 cut(s) 797
FspBI CTAG 3 cut(s) 278, 533, 663
GluI GCNGC 1 cut(s) 797
HaeIII GGCC 1 cut(s) 119
Hin1II CATG 6 cut(s) 124, 130, 191, 548, 634, 803
HindIII AAGCTT 1 cut(s) 59
HinfI GANTC 7 cut(s) 50, 80, 424, 465, 483, 678, 721
HphI GGTGA 3 cut(s) 167, 733, 759
Hpy166II GTNNAC 2 cut(s) 202, 763
Hpy188I TCNGA 7 cut(s) 55, 195, 379, 488, 601, 653, 830
Hpy188III TCNNGA 2 cut(s) 311, 545
Hpy8I GTNNAC 2 cut(s) 202, 763
HpyAV CCTTC 2 cut(s) 596, 748
HpyCH4III ACNGT 2 cut(s) 211, 787
HpyCH4V TGCA 4 cut(s) 18, 234, 346, 520
HpyF10VI GCNNNNNNNGC 1 cut(s) 707
HpyF3I CTNAG 3 cut(s) 312, 428, 598
Hsp92II CATG 6 cut(s) 124, 130, 191, 548, 634, 803
Kzo9I GATC 3 cut(s) 190, 411, 547
LguI GCTCTTC 1 cut(s) 105
Lsp1109I GCAGC 1 cut(s) 808
MaeI CTAG 3 cut(s) 278, 533, 663
MalI GATC 3 cut(s) 192, 413, 549
MboI GATC 3 cut(s) 190, 411, 547
MboII GAAGA 4 cut(s) 122, 149, 152, 345
MluCI AATT 3 cut(s) 10, 373, 667
MlyI GAGTC 4 cut(s) 74, 418, 474, 477
MnlI CCTC 6 cut(s) 146, 316, 425, 450, 561, 585
MseI TTAA 2 cut(s) 99, 176
MslI CAYNNNNRTG 2 cut(s) 125, 209
MspR9I CCNGG 1 cut(s) 753
MvaI CCWGG 1 cut(s) 753
MwoI GCNNNNNNNGC 1 cut(s) 707
NdeII GATC 3 cut(s) 190, 411, 547
NheI GCTAGC 1 cut(s) 277
NlaIII CATG 6 cut(s) 124, 130, 191, 548, 634, 803
NlaIV GGNNCC 2 cut(s) 525, 660
PagI TCATGA 1 cut(s) 544
PciSI GCTCTTC 1 cut(s) 105
PfeI GAWTC 3 cut(s) 50, 678, 721
PkrI GCNGC 1 cut(s) 798
PleI GAGTC 4 cut(s) 74, 418, 473, 477
PpsI GAGTC 4 cut(s) 74, 418, 473, 477
PpuMI RGGWCCY 2 cut(s) 523, 659
Psp5II RGGWCCY 2 cut(s) 523, 659
Psp6I CCWGG 1 cut(s) 751
PspGI CCWGG 1 cut(s) 751
PspN4I GGNNCC 2 cut(s) 525, 660
PspPI GGNCC 2 cut(s) 523, 659
PspPPI RGGWCCY 2 cut(s) 523, 659
PstI CTGCAG 2 cut(s) 348, 522
RsaI GTAC 1 cut(s) 573
RsaNI GTAC 1 cut(s) 572
RseI CAYNNNNRTG 2 cut(s) 125, 209
SapI GCTCTTC 1 cut(s) 105
SaqAI TTAA 2 cut(s) 99, 176
SatI GCNGC 1 cut(s) 797
Sau3AI GATC 3 cut(s) 190, 411, 547
Sau96I GGNCC 2 cut(s) 523, 659
SchI GAGTC 4 cut(s) 74, 418, 474, 477
ScrFI CCNGG 1 cut(s) 753
SfcI CTRYAG 2 cut(s) 344, 518
SinI GGWCC 2 cut(s) 523, 659
SmiMI CAYNNNNRTG 2 cut(s) 125, 209
Sse9I AATT 3 cut(s) 10, 373, 667
SsiI CCGC 1 cut(s) 794
SspMI CTAG 3 cut(s) 278, 533, 663
StyD4I CCNGG 1 cut(s) 751
TaaI ACNGT 2 cut(s) 211, 787
TaqI TCGA 1 cut(s) 716
TasI AATT 3 cut(s) 10, 373, 667
TatI WGTACW 1 cut(s) 571
TfiI GAWTC 3 cut(s) 50, 678, 721
Tru1I TTAA 2 cut(s) 99, 176
Tru9I TTAA 2 cut(s) 99, 176
TscAI CASTG 1 cut(s) 216
TseI GCWGC 1 cut(s) 796
TspDTI ATGAA 3 cut(s) 150, 296, 530
TspRI CASTG 1 cut(s) 216
VpaK11BI GGWCC 2 cut(s) 523, 659
XapI RAATTY 1 cut(s) 373
XspI CTAG 3 cut(s) 278, 533, 663
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.