RchiOBHm_Chr4g0437731

cytochrome P450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
60719519 .. 60720253
735 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ40596

Sequence Viewer

Length: 636 bp
ATGAAATTCCTCGCTTTTGCTATTTTCTCTTGTAGTGATTGCAAGACATTTTACTTTGCAGGGCAAGAAACCAGTAATACATTGCTTGTTTGGACTGTTTTTCTCCTAGCAGTTCATACAGATTGGCAAGAGGAAGCAAGAAAGGAGATCCTACAATTATTTGGAAAACAGAATCCAAATCCGGATGGCATTTCCAAACTTAAAATCATGAGTATGATCCTCGATGAGTCTCTAAGGTTATATCCTCCTGCTGTTGCCATTCCACGGAGCACTGGAAGGGAAGTTAGACTAGGAAAGCTCATTGTCCTTGCTAATGGTGATCTGCTCGTCTCAGTTCTAGCACTGCACCATGATCCTCAATTTTGGGGACCAGATGTGCATCTTTTCAAGCCTGAGAGATTCTCAAGGGGCGTTGCTAAAGCTACTATCAGTAATGTAGGTGCTTTCGTGCCATTTGGACTGGGACCTCGAACTTGTGTGGGCTTGAACTTCGCAATCACTGAAGCTAAGATTGCCTTGTCGATGATTCTACAATGCTACTCCTTCACTCTTTCCCTGGCTTATATCCACTCCCCCTATCAGAATATCACACTCCGGCCACAACATGGACTTCAAGTATTGCTACAACCATTGTGA

Protein Analysis

211

Amino Acids

23.55

Weight (kDa)

8.93

Isoelectric Point (pI)

36.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 15 - 195 8.6e-42 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 605
AccIII TCCGGA 1 cut(s) 181
AclWI GGATC 3 cut(s) 142, 211, 347
AcoI YGGCCR 1 cut(s) 596
AcsI RAATTY 1 cut(s) 5
AcuI CTGAAG 1 cut(s) 522
AfiI CCNNNNNNNGG 2 cut(s) 264, 605
AgsI TTSAA 3 cut(s) 388, 487, 614
AjnI CCWGG 1 cut(s) 555
AluBI AGCT 3 cut(s) 298, 422, 506
AluI AGCT 3 cut(s) 298, 422, 506
Alw21I GWGCWC 1 cut(s) 272
Alw26I GTCTC 2 cut(s) 234, 334
AlwI GGATC 3 cut(s) 142, 211, 347
Aor13HI TCCGGA 1 cut(s) 181
AoxI GGCC 1 cut(s) 596
ApoI RAATTY 1 cut(s) 5
AspS9I GGNCC 2 cut(s) 368, 464
AsuHPI GGTGA 1 cut(s) 329
AvaII GGWCC 2 cut(s) 368, 464
Bbv12I GWGCWC 1 cut(s) 272
BccI CCATC 1 cut(s) 179
BciT130I CCWGG 1 cut(s) 557
BcoDI GTCTC 2 cut(s) 234, 334
BfaI CTAG 3 cut(s) 107, 290, 338
Bme1390I CCNGG 1 cut(s) 557
Bme18I GGWCC 2 cut(s) 368, 464
BmgT120I GGNCC 2 cut(s) 368, 464
BmiI GGNNCC 2 cut(s) 369, 465
BmrFI CCNGG 1 cut(s) 557
BmrI ACTGGG 1 cut(s) 470
BmsI GCATC 1 cut(s) 388
BmuI ACTGGG 1 cut(s) 470
BplI GAGNNNNNCTC 2 cut(s) 386, 418
BpuEI CTTGAG 1 cut(s) 388
BsaBI GATNNNNATC 1 cut(s) 378
BsaJI CCNNGG 2 cut(s) 263, 555
BsaWI WCCGGW 1 cut(s) 181
Bsc4I CCNNNNNNNGG 2 cut(s) 264, 605
Bse1I ACTGG 3 cut(s) 72, 277, 465
Bse3DI GCAATG 1 cut(s) 80
Bse8I GATNNNNATC 1 cut(s) 378
BseAI TCCGGA 1 cut(s) 181
BseBI CCWGG 1 cut(s) 557
BseDI CCNNGG 2 cut(s) 263, 555
BseGI GGATG 1 cut(s) 190
BseJI GATNNNNATC 1 cut(s) 378
BseLI CCNNNNNNNGG 2 cut(s) 264, 605
BseMI GCAATG 1 cut(s) 80
BseMII CTCAG 2 cut(s) 345, 384
BseNI ACTGG 3 cut(s) 72, 277, 465
BsgI GTGCAG 1 cut(s) 329
BshFI GGCC 1 cut(s) 598
BsiHKAI GWGCWC 1 cut(s) 272
BsiSI CCGG 2 cut(s) 182, 595
BslFI GGGAC 2 cut(s) 381, 477
BslI CCNNNNNNNGG 2 cut(s) 264, 605
BsmAI GTCTC 2 cut(s) 234, 334
BsmBI CGTCTC 1 cut(s) 334
BsmFI GGGAC 2 cut(s) 381, 477
BsnI GGCC 1 cut(s) 598
Bsp1286I GDGCHC 1 cut(s) 272
Bsp13I TCCGGA 1 cut(s) 181
Bsp143I GATC 4 cut(s) 147, 216, 319, 352
BspANI GGCC 1 cut(s) 598
BspCNI CTCAG 2 cut(s) 344, 385
BspEI TCCGGA 1 cut(s) 181
BspHI TCATGA 1 cut(s) 207
BspLI GGNNCC 2 cut(s) 369, 465
BspPI GGATC 3 cut(s) 142, 211, 347
BsrDI GCAATG 1 cut(s) 80
BsrI ACTGG 3 cut(s) 72, 277, 465
BssECI CCNNGG 2 cut(s) 263, 555
BssMI GATC 4 cut(s) 147, 216, 319, 352
Bst2UI CCWGG 1 cut(s) 557
Bst4CI ACNGT 1 cut(s) 97
BstDEI CTNAG 4 cut(s) 233, 331, 393, 507
BstDSI CCRYGG 1 cut(s) 263
BstF5I GGATG 1 cut(s) 190
BstKTI GATC 4 cut(s) 150, 219, 322, 355
BstMAI GTCTC 2 cut(s) 234, 334
BstMBI GATC 4 cut(s) 147, 216, 319, 352
BstMWI GCNNNNNNNGC 1 cut(s) 512
BstNI CCWGG 1 cut(s) 557
BstSCI CCNGG 1 cut(s) 555
BstX2I RGATCY 1 cut(s) 147
BstYI RGATCY 1 cut(s) 147
BsuRI GGCC 1 cut(s) 598
BtgI CCRYGG 1 cut(s) 263
BtsCI GGATG 1 cut(s) 190
BtsI GCAGTG 1 cut(s) 341
BtsIMutI CAGTG 3 cut(s) 270, 341, 498
CciI TCATGA 1 cut(s) 207
Cfr13I GGNCC 2 cut(s) 368, 464
CviAII CATG 3 cut(s) 208, 350, 605
CviJI RGCY 7 cut(s) 298, 391, 422, 483, 506, 560, 598
CviKI_1 RGCY 7 cut(s) 298, 391, 422, 483, 506, 560, 598
DdeI CTNAG 4 cut(s) 233, 331, 393, 507
DpnI GATC 4 cut(s) 149, 218, 321, 354
DpnII GATC 4 cut(s) 147, 216, 319, 352
EaeI YGGCCR 1 cut(s) 596
Eco47I GGWCC 2 cut(s) 368, 464
Eco57I CTGAAG 1 cut(s) 522
EcoO109I RGGNCCY 1 cut(s) 464
EcoRII CCWGG 1 cut(s) 555
Esp3I CGTCTC 1 cut(s) 334
FaeI CATG 3 cut(s) 211, 353, 608
FaiI YATR 7 cut(s) 117, 209, 215, 241, 351, 564, 606
FalI AAGNNNNNCTT 2 cut(s) 500, 532
FaqI GGGAC 2 cut(s) 381, 477
FatI CATG 3 cut(s) 207, 349, 604
FokI GGATG 1 cut(s) 197
FspBI CTAG 3 cut(s) 107, 290, 338
HaeIII GGCC 1 cut(s) 598
HapII CCGG 2 cut(s) 182, 595
Hin1II CATG 3 cut(s) 211, 353, 608
HinfI GANTC 4 cut(s) 172, 227, 399, 526
HpaII CCGG 2 cut(s) 182, 595
HphI GGTGA 1 cut(s) 329
Hpy188I TCNGA 1 cut(s) 582
Hpy188III TCNNGA 2 cut(s) 182, 208
HpyAV CCTTC 2 cut(s) 270, 553
HpyCH4III ACNGT 1 cut(s) 97
HpyCH4V TGCA 4 cut(s) 42, 59, 346, 379
HpyF10VI GCNNNNNNNGC 1 cut(s) 512
HpyF3I CTNAG 4 cut(s) 233, 331, 393, 507
Hsp92II CATG 3 cut(s) 211, 353, 608
Kpn2I TCCGGA 1 cut(s) 181
Kzo9I GATC 4 cut(s) 147, 216, 319, 352
LmnI GCTCC 1 cut(s) 267
LweI GCATC 1 cut(s) 388
MaeI CTAG 3 cut(s) 107, 290, 338
MalI GATC 4 cut(s) 149, 218, 321, 354
MboI GATC 4 cut(s) 147, 216, 319, 352
MflI RGATCY 1 cut(s) 147
MhlI GDGCHC 1 cut(s) 272
MluCI AATT 3 cut(s) 5, 155, 359
MlyI GAGTC 1 cut(s) 236
MnlI CCTC 6 cut(s) 20, 124, 230, 255, 366, 477
MroI TCCGGA 1 cut(s) 181
MseI TTAA 1 cut(s) 201
MslI CAYNNNNRTG 1 cut(s) 212
MspI CCGG 2 cut(s) 182, 595
MspR9I CCNGG 1 cut(s) 557
MvaI CCWGG 1 cut(s) 557
MwoI GCNNNNNNNGC 1 cut(s) 512
NdeII GATC 4 cut(s) 147, 216, 319, 352
NlaIII CATG 3 cut(s) 211, 353, 608
NlaIV GGNNCC 2 cut(s) 369, 465
PagI TCATGA 1 cut(s) 207
PfeI GAWTC 3 cut(s) 172, 399, 526
PflMI CCANNNNNTGG 1 cut(s) 605
PleI GAGTC 1 cut(s) 235
PpsI GAGTC 1 cut(s) 235
PpuMI RGGWCCY 1 cut(s) 464
Psp5II RGGWCCY 1 cut(s) 464
Psp6I CCWGG 1 cut(s) 555
PspGI CCWGG 1 cut(s) 555
PspN4I GGNNCC 2 cut(s) 369, 465
PspPI GGNCC 2 cut(s) 368, 464
PspPPI RGGWCCY 1 cut(s) 464
PsuI RGATCY 1 cut(s) 147
RseI CAYNNNNRTG 1 cut(s) 212
SaqAI TTAA 1 cut(s) 201
Sau3AI GATC 4 cut(s) 147, 216, 319, 352
Sau96I GGNCC 2 cut(s) 368, 464
SchI GAGTC 1 cut(s) 236
ScrFI CCNGG 1 cut(s) 557
SduI GDGCHC 1 cut(s) 272
SetI ASST 6 cut(s) 239, 300, 424, 442, 469, 508
SfaNI GCATC 1 cut(s) 388
SinI GGWCC 2 cut(s) 368, 464
SmiMI CAYNNNNRTG 1 cut(s) 212
SmlI CTYRAG 1 cut(s) 403
SmoI CTYRAG 1 cut(s) 403
Sse9I AATT 3 cut(s) 5, 155, 359
SspMI CTAG 3 cut(s) 107, 290, 338
StyD4I CCNGG 1 cut(s) 555
TaaI ACNGT 1 cut(s) 97
TaqI TCGA 3 cut(s) 222, 469, 521
TasI AATT 3 cut(s) 5, 155, 359
TfiI GAWTC 3 cut(s) 172, 399, 526
Tru1I TTAA 1 cut(s) 201
Tru9I TTAA 1 cut(s) 201
TscAI CASTG 3 cut(s) 277, 348, 505
TspDTI ATGAA 2 cut(s) 17, 104
TspGWI ACGGA 1 cut(s) 280
TspRI CASTG 3 cut(s) 277, 348, 505
Van91I CCANNNNNTGG 1 cut(s) 605
VpaK11BI GGWCC 2 cut(s) 368, 464
XapI RAATTY 1 cut(s) 5
XspI CTAG 3 cut(s) 107, 290, 338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.