Rroxscaffold_5G00378820

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000078
Physical Location & Seq
Reverse (-)
59332354 .. 59335566
3213 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00378820.1

Sequence Viewer

Length: 1779 bp
ATGATGAGTTGGGTGAGAGAGACGGTCCTCACTCTTCCTGGTGTTTCGTGTACCTTTCTTCTTCTGTTGGCTTTGATCTTCATCAAGATAGTTTACAAACTATGGTGGACTCCAACTCGAACACAGAGATTCATGGCTTCTCAGGGAATCAGAGGTCCTTCTTACAGATTCATCCATGGAAACAGCAAAGAAATCAGCAACATGCTAAAGGACGCCATGAGCAGGCCCATACCGAATTTATCACATGATGTACTATCTGCAGTTCAACCTCACATTCACTCATGGACCAAGAGCTATGGGAAGAATTATCTACAATGGCATGGTCTTCAACCAGTTTTGGTCATTACAGAACCTGAGTTAGGCAAGGAGATTCTCAATAACAAAGATAGGGTTTATACAAAACAGAAGCCCAGTATCTATGTGAAGAAGCTATTGGGAGACAGCATTTCCATGGCAGAAGGTGAAAAATGGTCAAAACTGAGAAAGATTTCCAACCATGCCTTCCATGGAGACAGCTTAAAAAGTATGATTCCAGACATGATAGCTAGTGCTGAGACGATGCTCGAAGGGTGGAAAATCCATGAAGGAAAAGAGATTGAGGTGTCTGAACATTTTAGGTTATTCACTTCAGAAGTGATTTCTAGGACAGCATTTGGCAGCAGCTATTTAGAAGGGAAGAATATTTTTGACATGTTGATGAAGTTAAGCTCTGTAATATTCAGAAATGCTCACAAACTCAGGGTTCCTGGCATCAGCAAGTTTTATAAAACCAGTGATGAGAAGGAATCAGAGAAGCATGAGAAAGGAATAGGAGACACCATAATAGAGATTGTTAAGAAAAGAGAGAGGGAGGCAGTGACTGGAGAAGAAGGCAGCTTTGGGACTGATTTTCTTGGATTGCTTTTAAAGGCTCGCCATGCTACCAATGACAAGCAGATGATTTCAGTGAATGAATTGGTCGAGGAGTGCAAGACATTTTACTTTGCTGGACAAGAAACTACTAACTCTTTGCTTGTTTGGACTGTCTTTCTTCTGGCCCTCCATCCGGAATGGCAAGAGGAAGCAAGAAAGGAGGTCCTGCAGCTATTTGGGAAAAAAACTCCAAATCCTGATGGCCTTGCCAAACTAAAAACAATGAGTATGATCATCAATGAGTCTCTGAGGCTATATCCTCCTGTCATTTCCCTTGTACGAACAGTGGATAAGGAAGTTAAATTGGGAAACCTCATTATACCTGCTAATGTTGAATTGCTTGTCTCAAATCTAGCACTTCATCATGAACCTCAGTTCTGGGGACAAGATGCGAAACATTTCAAACCTGAGAGATTCTCTGAAGGTGTTGCTAGTGCTACTAACAACAACATGGCTGCATTCTTACCCTTTGGAATGGGACCTAGAACTTGTGTTGGCCTCAACTTTGCCACCATTGAAGCAAAGATTGCTCTTTCAATGATTCTGCAACGCTACTCCTTCACTCTTTCCCCAGCCTATGTCCACTCGCCCTTTCAGTTTCTCACAGTTCGTCCACAGCATGGACTTCAAGCTATGTTTCCAGAAATGATAGCTAGTGCCGAGGTGATGGTAGAAAGGTGGAAAAATCATGAAGGAAAAGAGATTGATGTGTTTGAAGAATTTAGATTGTTGACTTCAGAAGTGATTTCCAGGACGGCTTTTGGCAGCAGCTACTTAGAAGGACAAAACATTTTTGAAATGTTGAAGAAGTTAAGCGTCATAGTATTCAGAAATCTTTTCAAGATCAGGTTTCCTTGTATGAGGTAG

Protein Analysis

592

Amino Acids

67.6

Weight (kDa)

9.11

Isoelectric Point (pI)

37.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 92 - 496 6.4e-81 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 765
Acc36I ACCTGC 1 cut(s) 1243
AccB7I CCANNNNNTGG 1 cut(s) 1532
AccIII TCCGGA 1 cut(s) 1045
AcsI RAATTY 2 cut(s) 235, 1631
AcuI CTGAAG 3 cut(s) 612, 1353, 1632
AcyI GRCGYC 1 cut(s) 213
AfaI GTAC 3 cut(s) 52, 252, 1191
AfiI CCNNNNNNNGG 4 cut(s) 222, 359, 1045, 1532
AflIII ACRYGT 1 cut(s) 690
AjnI CCWGG 3 cut(s) 37, 745, 1661
AjuI GAANNNNNNNTTGG 6 cut(s) 416, 448, 485, 517, 861, 893
Alw26I GTCTC 7 cut(s) 14, 432, 504, 548, 807, 1161, 1261
AlwNI CAGNNNCTG 2 cut(s) 353, 860
Aor13HI TCCGGA 1 cut(s) 1045
AoxI GGCC 4 cut(s) 224, 1035, 1114, 1408
ApeKI GCWGC 7 cut(s) 657, 660, 873, 1081, 1367, 1677, 1680
ApoI RAATTY 2 cut(s) 235, 1631
Asp700I GAANNNNTTC 2 cut(s) 487, 1310
AspS9I GGNCC 7 cut(s) 25, 155, 225, 285, 1036, 1075, 1391
AsuHPI GGTGA 3 cut(s) 25, 473, 1588
AvaII GGWCC 5 cut(s) 25, 155, 285, 1075, 1391
BbsI GAAGAC 1 cut(s) 317
BbvI GCAGC 7 cut(s) 669, 672, 885, 1093, 1354, 1689, 1692
BccI CCATC 3 cut(s) 1050, 1106, 1573
BceAI ACGGC 1 cut(s) 1683
BciT130I CCWGG 3 cut(s) 39, 747, 1663
BclI TGATCA 1 cut(s) 1143
BcoDI GTCTC 7 cut(s) 14, 432, 504, 548, 807, 1161, 1261
BfaI CTAG 6 cut(s) 546, 642, 1265, 1344, 1395, 1566
BfmI CTRYAG 2 cut(s) 258, 1079
BfuAI ACCTGC 1 cut(s) 1243
BisI GCNGC 7 cut(s) 658, 661, 874, 1082, 1368, 1678, 1681
BlsI GCNGC 7 cut(s) 659, 662, 875, 1083, 1369, 1679, 1682
Bme1390I CCNGG 3 cut(s) 39, 747, 1663
Bme18I GGWCC 5 cut(s) 25, 155, 285, 1075, 1391
BmgT120I GGNCC 7 cut(s) 25, 155, 225, 285, 1036, 1075, 1391
BmiI GGNNCC 2 cut(s) 744, 1392
BmrFI CCNGG 3 cut(s) 39, 747, 1663
BmrI ACTGGG 1 cut(s) 405
BmsI GCATC 3 cut(s) 549, 759, 1291
BmuI ACTGGG 1 cut(s) 405
BpiI GAAGAC 1 cut(s) 317
BplI GAGNNNNNCTC 2 cut(s) 1313, 1345
BpmI CTGGAG 1 cut(s) 882
BsaBI GATNNNNATC 1 cut(s) 80
BsaHI GRCGYC 1 cut(s) 213
BsaJI CCNNGG 4 cut(s) 175, 450, 505, 1572
BsaWI WCCGGW 1 cut(s) 1045
Bsc4I CCNNNNNNNGG 4 cut(s) 222, 359, 1045, 1532
Bse1I ACTGG 4 cut(s) 332, 411, 771, 865
Bse8I GATNNNNATC 1 cut(s) 80
BseAI TCCGGA 1 cut(s) 1045
BseBI CCWGG 3 cut(s) 39, 747, 1663
BseDI CCNNGG 4 cut(s) 175, 450, 505, 1572
BseGI GGATG 2 cut(s) 171, 1042
BseJI GATNNNNATC 1 cut(s) 80
BseLI CCNNNNNNNGG 4 cut(s) 222, 359, 1045, 1532
BseMII CTCAG 8 cut(s) 155, 345, 470, 543, 751, 1151, 1298, 1311
BseNI ACTGG 4 cut(s) 332, 411, 771, 865
BseRI GAGGAG 1 cut(s) 977
BseXI GCAGC 7 cut(s) 669, 672, 885, 1093, 1354, 1689, 1692
BseYI CCCAGC 1 cut(s) 1483
BshFI GGCC 4 cut(s) 226, 1037, 1116, 1410
BsiSI CCGG 1 cut(s) 1046
BslFI GGGAC 3 cut(s) 895, 1308, 1404
BslI CCNNNNNNNGG 4 cut(s) 222, 359, 1045, 1532
BsmAI GTCTC 7 cut(s) 14, 432, 504, 548, 807, 1161, 1261
BsmBI CGTCTC 2 cut(s) 14, 548
BsmFI GGGAC 3 cut(s) 895, 1308, 1404
BsmI GAATGC 1 cut(s) 1370
BsnI GGCC 4 cut(s) 226, 1037, 1116, 1410
Bsp13I TCCGGA 1 cut(s) 1045
Bsp143I GATC 3 cut(s) 75, 1143, 1755
Bsp19I CCATGG 3 cut(s) 175, 450, 505
BspANI GGCC 4 cut(s) 226, 1037, 1116, 1410
BspCNI CTCAG 8 cut(s) 154, 346, 471, 544, 750, 1152, 1297, 1312
BspEI TCCGGA 1 cut(s) 1045
BspHI TCATGA 2 cut(s) 1276, 1600
BspLI GGNNCC 2 cut(s) 744, 1392
BspMAI CTGCAG 2 cut(s) 262, 1083
BspMI ACCTGC 1 cut(s) 1243
BsrI ACTGG 4 cut(s) 332, 411, 771, 865
BssECI CCNNGG 4 cut(s) 175, 450, 505, 1572
BssMI GATC 3 cut(s) 75, 1143, 1755
BssNI GRCGYC 1 cut(s) 213
BssT1I CCWWGG 3 cut(s) 175, 450, 505
Bst2UI CCWGG 3 cut(s) 39, 747, 1663
Bst4CI ACNGT 4 cut(s) 25, 1024, 1198, 1519
Bst6I CTCTTC 1 cut(s) 39
BstACI GRCGYC 1 cut(s) 213
BstAPI GCANNNNNTGC 1 cut(s) 1439
BstC8I GCNNGC 2 cut(s) 224, 913
BstDEI CTNAG 9 cut(s) 141, 354, 479, 552, 737, 1160, 1284, 1320, 1687
BstDSI CCRYGG 3 cut(s) 175, 450, 505
BstENI CCTNNNNNAGG 1 cut(s) 357
BstF5I GGATG 2 cut(s) 171, 1042
BstKTI GATC 3 cut(s) 78, 1146, 1758
BstMAI GTCTC 7 cut(s) 14, 432, 504, 548, 807, 1161, 1261
BstMBI GATC 3 cut(s) 75, 1143, 1755
BstMWI GCNNNNNNNGC 2 cut(s) 917, 1439
BstNI CCWGG 3 cut(s) 39, 747, 1663
BstNSI RCATGY 2 cut(s) 205, 694
BstSCI CCNGG 3 cut(s) 37, 745, 1661
BstSFI CTRYAG 2 cut(s) 258, 1079
BstV1I GCAGC 7 cut(s) 669, 672, 885, 1093, 1354, 1689, 1692
BstV2I GAAGAC 1 cut(s) 317
BsuRI GGCC 4 cut(s) 226, 1037, 1116, 1410
BtgI CCRYGG 3 cut(s) 175, 450, 505
BtsCI GGATG 2 cut(s) 171, 1042
BtsI GCAGTG 1 cut(s) 861
BtsIMutI CAGTG 4 cut(s) 778, 861, 951, 1203
BveI ACCTGC 1 cut(s) 1243
Cac8I GCNNGC 2 cut(s) 224, 913
CaiI CAGNNNCTG 2 cut(s) 353, 860
CciI TCATGA 2 cut(s) 1276, 1600
Cfr13I GGNCC 7 cut(s) 25, 155, 225, 285, 1036, 1075, 1391
CseI GACGC 2 cut(s) 221, 1717
Csp6I GTAC 3 cut(s) 51, 251, 1190
CviQI GTAC 3 cut(s) 51, 251, 1190
DdeI CTNAG 9 cut(s) 141, 354, 479, 552, 737, 1160, 1284, 1320, 1687
DpnI GATC 3 cut(s) 77, 1145, 1757
DpnII GATC 3 cut(s) 75, 1143, 1755
DraI TTTAAA 1 cut(s) 906
Eam1104I CTCTTC 1 cut(s) 39
EarI CTCTTC 1 cut(s) 39
Eco130I CCWWGG 3 cut(s) 175, 450, 505
Eco47I GGWCC 5 cut(s) 25, 155, 285, 1075, 1391
Eco57I CTGAAG 3 cut(s) 612, 1353, 1632
EcoNI CCTNNNNNAGG 1 cut(s) 357
EcoO109I RGGNCCY 3 cut(s) 155, 1075, 1391
EcoRII CCWGG 3 cut(s) 37, 745, 1661
EcoT14I CCWWGG 3 cut(s) 175, 450, 505
ErhI CCWWGG 3 cut(s) 175, 450, 505
Esp3I CGTCTC 2 cut(s) 14, 548
FaqI GGGAC 3 cut(s) 895, 1308, 1404
FbaI TGATCA 1 cut(s) 1143
Fnu4HI GCNGC 7 cut(s) 658, 661, 874, 1082, 1368, 1678, 1681
FokI GGATG 2 cut(s) 158, 1029
Fsp4HI GCNGC 7 cut(s) 658, 661, 874, 1082, 1368, 1678, 1681
FspBI CTAG 6 cut(s) 546, 642, 1265, 1344, 1395, 1566
GluI GCNGC 7 cut(s) 658, 661, 874, 1082, 1368, 1678, 1681
GsaI CCCAGC 1 cut(s) 1487
GsuI CTGGAG 1 cut(s) 882
HaeIII GGCC 4 cut(s) 226, 1037, 1116, 1410
HapII CCGG 1 cut(s) 1046
HgaI GACGC 2 cut(s) 221, 1717
Hin1I GRCGYC 1 cut(s) 213
HincII GTYRAC 1 cut(s) 1644
HindII GTYRAC 1 cut(s) 1644
HpaII CCGG 1 cut(s) 1046
HphI GGTGA 3 cut(s) 25, 473, 1588
Hpy166II GTNNAC 6 cut(s) 51, 94, 108, 1495, 1526, 1644
Hpy188I TCNGA 9 cut(s) 152, 607, 631, 722, 790, 1161, 1333, 1651, 1742
Hpy188III TCNNGA 8 cut(s) 85, 533, 1046, 1109, 1277, 1553, 1601, 1753
Hpy8I GTNNAC 6 cut(s) 51, 94, 108, 1495, 1526, 1644
HpyCH4III ACNGT 4 cut(s) 25, 1024, 1198, 1519
HpyCH4V TGCA 5 cut(s) 260, 969, 1081, 1370, 1459
HpyF10VI GCNNNNNNNGC 2 cut(s) 917, 1439
HpyF3I CTNAG 9 cut(s) 141, 354, 479, 552, 737, 1160, 1284, 1320, 1687
Hsp92I GRCGYC 1 cut(s) 213
Kpn2I TCCGGA 1 cut(s) 1045
Ksp22I TGATCA 1 cut(s) 1143
Kzo9I GATC 3 cut(s) 75, 1143, 1755
Lsp1109I GCAGC 7 cut(s) 669, 672, 885, 1093, 1354, 1689, 1692
LweI GCATC 3 cut(s) 549, 759, 1291
MaeI CTAG 6 cut(s) 546, 642, 1265, 1344, 1395, 1566
MaeIII GTNAC 1 cut(s) 856
MalI GATC 3 cut(s) 77, 1145, 1757
MboI GATC 3 cut(s) 75, 1143, 1755
MluCI AATT 6 cut(s) 235, 304, 953, 1214, 1247, 1631
MlyI GAGTC 2 cut(s) 103, 1163
MmeI TCCRAC 2 cut(s) 137, 516
MroI TCCGGA 1 cut(s) 1045
MroXI GAANNNNTTC 2 cut(s) 487, 1310
MseI TTAA 6 cut(s) 518, 704, 834, 905, 1212, 1724
MslI CAYNNNNRTG 2 cut(s) 449, 695
MspI CCGG 1 cut(s) 1046
MspR9I CCNGG 3 cut(s) 39, 747, 1663
Mva1269I GAATGC 1 cut(s) 1370
MvaI CCWGG 3 cut(s) 39, 747, 1663
MwoI GCNNNNNNNGC 2 cut(s) 917, 1439
NcoI CCATGG 3 cut(s) 175, 450, 505
NdeII GATC 3 cut(s) 75, 1143, 1755
NlaIV GGNNCC 2 cut(s) 744, 1392
NmeAIII GCCGAG 1 cut(s) 1597
NmuCI GTSAC 1 cut(s) 856
NspI RCATGY 2 cut(s) 205, 694
PagI TCATGA 2 cut(s) 1276, 1600
PciI ACATGT 1 cut(s) 690
PctI GAATGC 1 cut(s) 1370
PdmI GAANNNNTTC 2 cut(s) 487, 1310
PfeI GAWTC 8 cut(s) 129, 147, 168, 370, 529, 785, 1326, 1453
PflMI CCANNNNNTGG 1 cut(s) 1532
PfoI TCCNGGA 1 cut(s) 1661
PkrI GCNGC 7 cut(s) 659, 662, 875, 1083, 1369, 1679, 1682
PleI GAGTC 2 cut(s) 103, 1162
PpsI GAGTC 2 cut(s) 103, 1162
PpuMI RGGWCCY 3 cut(s) 155, 1075, 1391
PscI ACATGT 1 cut(s) 690
PsiI TTATAA 1 cut(s) 765
Psp5II RGGWCCY 3 cut(s) 155, 1075, 1391
Psp6I CCWGG 3 cut(s) 37, 745, 1661
PspFI CCCAGC 1 cut(s) 1483
PspGI CCWGG 3 cut(s) 37, 745, 1661
PspN4I GGNNCC 2 cut(s) 744, 1392
PspPI GGNCC 7 cut(s) 25, 155, 225, 285, 1036, 1075, 1391
PspPPI RGGWCCY 3 cut(s) 155, 1075, 1391
PstI CTGCAG 2 cut(s) 262, 1083
PstNI CAGNNNCTG 2 cut(s) 353, 860
RsaI GTAC 3 cut(s) 52, 252, 1191
RsaNI GTAC 3 cut(s) 51, 251, 1190
RseI CAYNNNNRTG 2 cut(s) 449, 695
SaqAI TTAA 6 cut(s) 518, 704, 834, 905, 1212, 1724
SatI GCNGC 7 cut(s) 658, 661, 874, 1082, 1368, 1678, 1681
Sau3AI GATC 3 cut(s) 75, 1143, 1755
Sau96I GGNCC 7 cut(s) 25, 155, 225, 285, 1036, 1075, 1391
SchI GAGTC 2 cut(s) 103, 1163
ScrFI CCNGG 3 cut(s) 39, 747, 1663
SfaNI GCATC 3 cut(s) 549, 759, 1291
SfcI CTRYAG 2 cut(s) 258, 1079
SinI GGWCC 5 cut(s) 25, 155, 285, 1075, 1391
SmiMI CAYNNNNRTG 2 cut(s) 449, 695
Sse9I AATT 6 cut(s) 235, 304, 953, 1214, 1247, 1631
SspI AATATT 2 cut(s) 682, 717
SspMI CTAG 6 cut(s) 546, 642, 1265, 1344, 1395, 1566
StyD4I CCNGG 3 cut(s) 37, 745, 1661
StyI CCWWGG 3 cut(s) 175, 450, 505
TaaI ACNGT 4 cut(s) 25, 1024, 1198, 1519
TaqI TCGA 3 cut(s) 118, 564, 960
TasI AATT 6 cut(s) 235, 304, 953, 1214, 1247, 1631
TatI WGTACW 1 cut(s) 250
TfiI GAWTC 8 cut(s) 129, 147, 168, 370, 529, 785, 1326, 1453
Tru1I TTAA 6 cut(s) 518, 704, 834, 905, 1212, 1724
Tru9I TTAA 6 cut(s) 518, 704, 834, 905, 1212, 1724
TscAI CASTG 4 cut(s) 778, 861, 951, 1203
TseFI GTSAC 1 cut(s) 856
TseI GCWGC 7 cut(s) 657, 660, 873, 1081, 1367, 1677, 1680
Tsp45I GTSAC 1 cut(s) 856
TspDTI ATGAA 9 cut(s) 70, 121, 160, 597, 713, 966, 1262, 1293, 1617
TspRI CASTG 4 cut(s) 778, 861, 951, 1203
Van91I CCANNNNNTGG 1 cut(s) 1532
VpaK11BI GGWCC 5 cut(s) 25, 155, 285, 1075, 1391
XagI CCTNNNNNAGG 1 cut(s) 357
XapI RAATTY 2 cut(s) 235, 1631
XceI RCATGY 2 cut(s) 205, 694
XcmI CCANNNNNNNNNTGG 1 cut(s) 503
XmnI GAANNNNTTC 2 cut(s) 487, 1310
XspI CTAG 6 cut(s) 546, 642, 1265, 1344, 1395, 1566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.