MD16G1056900.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Reverse (-)
4088231 .. 4089086
856 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1056900.v1.1.491

Sequence Viewer

Length: 591 bp
ATGATCAGTAGGTTCAGAGGCATAGCAAAAGAGAAAAACAGTAACGAAATGATTTGGTTTGGAGATCCGGTGATCACTCTTTTGAGCTTTCTGTGTTTATTCATTCTCTTAGCTCTCATCAAGATCTTTCAAACTATGGTAGACTCCAAATCGCATTCAAAATTCGCTCGCTTTGCAGGGAATCAAAGGCGTCCTTCTTACAGGCTTGTCCACGGAAGCACCCAAGAAATCGTGAGCATGAAAAGCGAAGCAATGGGAAGGCCCTTGAATTTATCACATGACATACAGTCCACAGTTCAACCTCATATTCACTCCTGGACCAAGATATATGGGAGGAGCTTTCTGCAGTGGTATGGTACCCAAGCTCAACTAGTTATTGGGGGACCTGAGTTGTGGAAAGAGATACTAAATAACAAAGAGCGAGCTTATCCGAAAAGGGAGCCTCCACCTTATGTAAAGAAACTATTGGGAGATGGCCTTGCATCAACTGAAGGTGAAAAATGGGGGAAACTGCGAAAGCTCGCCAACCATGCCTTCCATGGAGATATCTTAAGAAGTATGATTCCGACGATGACAACTACAATGCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

197

Amino Acids

22.44

Weight (kDa)

10.0

Isoelectric Point (pI)

38.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 99 - 192 9e-09 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 356
AccB1I GGYRCC 1 cut(s) 356
AccI GTMKAC 1 cut(s) 141
AclWI GGATC 1 cut(s) 59
AcsI RAATTY 2 cut(s) 161, 268
AcuI CTGAAG 1 cut(s) 510
AcyI GRCGYC 1 cut(s) 190
AfaI GTAC 1 cut(s) 358
AflII CTTAAG 1 cut(s) 550
AgsI TTSAA 4 cut(s) 131, 159, 268, 299
AhdI GACNNNNNGTC 1 cut(s) 286
AhlI ACTAGT 1 cut(s) 370
AjnI CCWGG 1 cut(s) 314
AjuI GAANNNNNNNTTGG 2 cut(s) 518, 550
AluBI AGCT 6 cut(s) 87, 113, 339, 365, 425, 520
AluI AGCT 6 cut(s) 87, 113, 339, 365, 425, 520
AlwI GGATC 1 cut(s) 59
AoxI GGCC 2 cut(s) 260, 475
ApoI RAATTY 2 cut(s) 161, 268
Asp718I GGTACC 1 cut(s) 356
AspS9I GGNCC 3 cut(s) 261, 318, 383
AsuHPI GGTGA 2 cut(s) 82, 506
AvaII GGWCC 2 cut(s) 318, 383
BanI GGYRCC 1 cut(s) 356
BccI CCATC 1 cut(s) 467
BciT130I CCWGG 1 cut(s) 316
BclI TGATCA 2 cut(s) 3, 72
BcuI ACTAGT 1 cut(s) 370
BfaI CTAG 1 cut(s) 371
BfmI CTRYAG 1 cut(s) 344
BfrI CTTAAG 1 cut(s) 550
BglII AGATCT 1 cut(s) 123
Bme1390I CCNGG 1 cut(s) 316
Bme18I GGWCC 2 cut(s) 318, 383
BmeRI GACNNNNNGTC 1 cut(s) 286
BmgT120I GGNCC 3 cut(s) 261, 318, 383
BmiI GGNNCC 3 cut(s) 358, 384, 441
BmrFI CCNGG 1 cut(s) 316
BmsI GCATC 1 cut(s) 491
BsaHI GRCGYC 1 cut(s) 190
BsaJI CCNNGG 2 cut(s) 211, 538
BsaWI WCCGGW 1 cut(s) 67
BsaXI ACNNNNNCTCC 2 cut(s) 54, 84
Bse3DI GCAATG 1 cut(s) 258
BseBI CCWGG 1 cut(s) 316
BseDI CCNNGG 2 cut(s) 211, 538
BseMI GCAATG 1 cut(s) 258
BseMII CTCAG 1 cut(s) 378
BseRI GAGGAG 1 cut(s) 349
BshFI GGCC 2 cut(s) 262, 477
BshNI GGYRCC 1 cut(s) 356
BsiSI CCGG 1 cut(s) 68
BslFI GGGAC 1 cut(s) 396
BsmFI GGGAC 1 cut(s) 396
BsmI GAATGC 1 cut(s) 154
BsnI GGCC 2 cut(s) 262, 477
Bsp143I GATC 4 cut(s) 3, 64, 72, 123
Bsp19I CCATGG 1 cut(s) 538
BspANI GGCC 2 cut(s) 262, 477
BspCNI CTCAG 1 cut(s) 379
BspLI GGNNCC 3 cut(s) 358, 384, 441
BspMAI CTGCAG 1 cut(s) 348
BspPI GGATC 1 cut(s) 59
BspT107I GGYRCC 1 cut(s) 356
BspTI CTTAAG 1 cut(s) 550
BsrDI GCAATG 1 cut(s) 258
BssECI CCNNGG 2 cut(s) 211, 538
BssMI GATC 4 cut(s) 3, 64, 72, 123
BssNI GRCGYC 1 cut(s) 190
BssT1I CCWWGG 1 cut(s) 538
Bst2UI CCWGG 1 cut(s) 316
Bst4CI ACNGT 3 cut(s) 41, 288, 295
BstACI GRCGYC 1 cut(s) 190
BstAFI CTTAAG 1 cut(s) 550
BstC8I GCNNGC 3 cut(s) 169, 423, 522
BstDEI CTNAG 2 cut(s) 109, 387
BstDSI CCRYGG 2 cut(s) 211, 538
BstKTI GATC 4 cut(s) 6, 67, 75, 126
BstMBI GATC 4 cut(s) 3, 64, 72, 123
BstMWI GCNNNNNNNGC 3 cut(s) 173, 243, 530
BstNI CCWGG 1 cut(s) 316
BstSCI CCNGG 1 cut(s) 314
BstSFI CTRYAG 1 cut(s) 344
BstX2I RGATCY 2 cut(s) 64, 123
BstYI RGATCY 2 cut(s) 64, 123
BsuRI GGCC 2 cut(s) 262, 477
BtgI CCRYGG 2 cut(s) 211, 538
BtsI GCAGTG 1 cut(s) 353
BtsIMutI CAGTG 1 cut(s) 353
Cac8I GCNNGC 3 cut(s) 169, 423, 522
Cfr13I GGNCC 3 cut(s) 261, 318, 383
CseI GACGC 1 cut(s) 179
Csp6I GTAC 1 cut(s) 357
CviAII CATG 4 cut(s) 238, 278, 530, 539
CviQI GTAC 1 cut(s) 357
DdeI CTNAG 2 cut(s) 109, 387
DpnI GATC 4 cut(s) 5, 66, 74, 125
DpnII GATC 4 cut(s) 3, 64, 72, 123
DriI GACNNNNNGTC 1 cut(s) 286
Eam1105I GACNNNNNGTC 1 cut(s) 286
Eco130I CCWWGG 1 cut(s) 538
Eco32I GATATC 1 cut(s) 547
Eco47I GGWCC 2 cut(s) 318, 383
Eco57I CTGAAG 1 cut(s) 510
EcoO109I RGGNCCY 2 cut(s) 261, 383
EcoRII CCWGG 1 cut(s) 314
EcoRV GATATC 1 cut(s) 547
EcoT14I CCWWGG 1 cut(s) 538
ErhI CCWWGG 1 cut(s) 538
FaeI CATG 4 cut(s) 241, 281, 533, 542
FalI AAGNNNNNCTT 2 cut(s) 178, 210
FaqI GGGAC 1 cut(s) 396
FatI CATG 4 cut(s) 237, 277, 529, 538
FbaI TGATCA 2 cut(s) 3, 72
FblI GTMKAC 1 cut(s) 141
FspBI CTAG 1 cut(s) 371
HaeIII GGCC 2 cut(s) 262, 477
HapII CCGG 1 cut(s) 68
HgaI GACGC 1 cut(s) 179
Hin1I GRCGYC 1 cut(s) 190
Hin1II CATG 4 cut(s) 241, 281, 533, 542
HinfI GANTC 3 cut(s) 143, 181, 562
HpaII CCGG 1 cut(s) 68
HphI GGTGA 2 cut(s) 82, 506
Hpy166II GTNNAC 3 cut(s) 142, 211, 291
Hpy188I TCNGA 3 cut(s) 17, 432, 567
Hpy188III TCNNGA 2 cut(s) 121, 232
Hpy8I GTNNAC 3 cut(s) 142, 211, 291
Hpy99I CGWCG 1 cut(s) 571
HpyAV CCTTC 4 cut(s) 204, 252, 485, 544
HpyCH4III ACNGT 3 cut(s) 41, 288, 295
HpyCH4V TGCA 3 cut(s) 176, 346, 482
HpyF10VI GCNNNNNNNGC 3 cut(s) 173, 243, 530
HpyF3I CTNAG 2 cut(s) 109, 387
Hsp92I GRCGYC 1 cut(s) 190
Hsp92II CATG 4 cut(s) 241, 281, 533, 542
KpnI GGTACC 1 cut(s) 360
Ksp22I TGATCA 2 cut(s) 3, 72
Kzo9I GATC 4 cut(s) 3, 64, 72, 123
LmnI GCTCC 2 cut(s) 336, 439
LpnPI CCDG 6 cut(s) 81, 162, 187, 301, 328, 399
LweI GCATC 1 cut(s) 491
MaeI CTAG 1 cut(s) 371
MaeIII GTNAC 1 cut(s) 41
MalI GATC 4 cut(s) 5, 66, 74, 125
MboI GATC 4 cut(s) 3, 64, 72, 123
MflI RGATCY 2 cut(s) 64, 123
MluCI AATT 2 cut(s) 161, 268
MlyI GAGTC 1 cut(s) 137
MmeI TCCRAC 1 cut(s) 590
MnlI CCTC 4 cut(s) 11, 312, 327, 453
MseI TTAA 1 cut(s) 551
MspCI CTTAAG 1 cut(s) 550
MspI CCGG 1 cut(s) 68
MspR9I CCNGG 1 cut(s) 316
Mva1269I GAATGC 1 cut(s) 154
MvaI CCWGG 1 cut(s) 316
MwoI GCNNNNNNNGC 3 cut(s) 173, 243, 530
NcoI CCATGG 1 cut(s) 538
NdeII GATC 4 cut(s) 3, 64, 72, 123
NlaIII CATG 4 cut(s) 241, 281, 533, 542
NlaIV GGNNCC 3 cut(s) 358, 384, 441
PctI GAATGC 1 cut(s) 154
PfeI GAWTC 2 cut(s) 181, 562
PfoI TCCNGGA 1 cut(s) 314
PleI GAGTC 1 cut(s) 137
PpsI GAGTC 1 cut(s) 137
PpuMI RGGWCCY 1 cut(s) 383
Psp5II RGGWCCY 1 cut(s) 383
Psp6I CCWGG 1 cut(s) 314
PspGI CCWGG 1 cut(s) 314
PspN4I GGNNCC 3 cut(s) 358, 384, 441
PspPI GGNCC 3 cut(s) 261, 318, 383
PspPPI RGGWCCY 1 cut(s) 383
PstI CTGCAG 1 cut(s) 348
PsuI RGATCY 2 cut(s) 64, 123
RsaI GTAC 1 cut(s) 358
RsaNI GTAC 1 cut(s) 357
SaqAI TTAA 1 cut(s) 551
Sau3AI GATC 4 cut(s) 3, 64, 72, 123
Sau96I GGNCC 3 cut(s) 261, 318, 383
SchI GAGTC 1 cut(s) 137
ScrFI CCNGG 1 cut(s) 316
SfaNI GCATC 1 cut(s) 491
SfcI CTRYAG 1 cut(s) 344
SinI GGWCC 2 cut(s) 318, 383
SmlI CTYRAG 1 cut(s) 550
SmoI CTYRAG 1 cut(s) 550
SpeI ACTAGT 1 cut(s) 370
Sse9I AATT 2 cut(s) 161, 268
SspMI CTAG 1 cut(s) 371
StyD4I CCNGG 1 cut(s) 314
StyI CCWWGG 1 cut(s) 538
TaaI ACNGT 3 cut(s) 41, 288, 295
TasI AATT 2 cut(s) 161, 268
TfiI GAWTC 2 cut(s) 181, 562
Tru1I TTAA 1 cut(s) 551
Tru9I TTAA 1 cut(s) 551
TscAI CASTG 1 cut(s) 353
TspDTI ATGAA 2 cut(s) 91, 254
TspGWI ACGGA 1 cut(s) 228
TspRI CASTG 1 cut(s) 353
Vha464I CTTAAG 1 cut(s) 550
VpaK11BI GGWCC 2 cut(s) 318, 383
XapI RAATTY 2 cut(s) 161, 268
XcmI CCANNNNNNNNNTGG 1 cut(s) 536
XmiI GTMKAC 1 cut(s) 141
XspI CTAG 1 cut(s) 371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.