Rorug03G0219200

cytochrome P450

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Reverse (-)
20014118 .. 20015344
1227 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0219200.1

Sequence Viewer

Length: 660 bp
ATGGAGAAGTCGGATTTGAATACTATCAGGAAGGTAGCGGACAAGGTTATCCTTAAATGGAGACAGGATCGAGAGAAGAAGGAGGAGGAGCAAGAGGAGCAGGAGGAGGAGGAGGAGAAGGAGGGGATAGTTGGAAATCCAGCAATGGCTGGAGGATCTTCACAGCAAGGGGCAGCTGTTGCACCAACTCAGCAGACCTCCCAGGCAGGTGGTTATTATCAAGCACCTCCTTCCACTGCTCCTTACTATAATGCGTCTCCGCCATCTTATCACACCTCCGGGCAAGGACATAGTTATCCTCAATATGGCTATAATCAACAAAGTTATCCTCAAGATGGCTATGGTATATATCAGCCACCAGGTTATGATCAACATGGCTACCATGGATTGTCCCTAACTTCTCAAACTGGTTATTGGACTCAACAACCTGCTCAATATGGATATGGATATGGATATGCTCAATCTAGTTATGGTTCTACAGCAGCTCAGCCAGGCTATGGCACCCCATCTTTTGGTGCACCCCCATTTGGTCAGCCAGGCTATGGCACCCCATCTTATGGTGCACCCCCATCTGGTCAGCCAGGTTATGGTGCTGCAGGATACACACAGCCTTCTACATATTCTCCTGATGGAGGGAATGGAAACACTCACGGGGCATAG

Protein Analysis

219

Amino Acids

23.37

Weight (kDa)

4.88

Isoelectric Point (pI)

50.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 197
Acc36I ACCTGC 2 cut(s) 197, 436
AccB1I GGYRCC 2 cut(s) 500, 545
AccB7I CCANNNNNTGG 5 cut(s) 497, 512, 542, 557, 587
AciI CCGC 2 cut(s) 38, 260
AclWI GGATC 2 cut(s) 75, 163
AgsI TTSAA 1 cut(s) 19
AjnI CCWGG 5 cut(s) 201, 358, 490, 535, 580
AluBI AGCT 2 cut(s) 176, 485
AluI AGCT 2 cut(s) 176, 485
Alw21I GWGCWC 2 cut(s) 520, 565
Alw26I GTCTC 2 cut(s) 55, 261
Alw44I GTGCAC 2 cut(s) 516, 561
AlwI GGATC 2 cut(s) 75, 163
ApaLI GTGCAC 2 cut(s) 516, 561
ApeKI GCWGC 3 cut(s) 173, 482, 593
AsuC2I CCSGG 1 cut(s) 280
BaeGI GKGCMC 2 cut(s) 520, 565
BanI GGYRCC 2 cut(s) 500, 545
Bbv12I GWGCWC 2 cut(s) 520, 565
BbvI GCAGC 3 cut(s) 185, 494, 580
BccI CCATC 6 cut(s) 271, 329, 514, 559, 577, 623
BciT130I CCWGG 5 cut(s) 203, 360, 492, 537, 582
BciVI GTATCC 1 cut(s) 593
BclI TGATCA 1 cut(s) 367
BcnI CCSGG 1 cut(s) 280
BcoDI GTCTC 2 cut(s) 55, 261
BfaI CTAG 1 cut(s) 465
BfmI CTRYAG 2 cut(s) 477, 594
BfuAI ACCTGC 2 cut(s) 197, 436
BfuI GTATCC 1 cut(s) 593
BisI GCNGC 3 cut(s) 174, 483, 594
BlpI GCTNAGC 1 cut(s) 486
BlsI GCNGC 3 cut(s) 175, 484, 595
Bme1390I CCNGG 6 cut(s) 203, 280, 360, 492, 537, 582
BmiI GGNNCC 2 cut(s) 502, 547
BmrFI CCNGG 6 cut(s) 203, 280, 360, 492, 537, 582
BpmI CTGGAG 1 cut(s) 171
Bpu1102I GCTNAGC 1 cut(s) 486
BpuEI CTTGAG 1 cut(s) 315
BpuMI CCSGG 1 cut(s) 280
BsaJI CCNNGG 2 cut(s) 201, 382
BsaXI ACNNNNNCTCC 2 cut(s) 607, 637
Bse1I ACTGG 1 cut(s) 412
Bse3DI GCAATG 1 cut(s) 150
BseBI CCWGG 5 cut(s) 203, 360, 492, 537, 582
BseDI CCNNGG 2 cut(s) 201, 382
BseMI GCAATG 1 cut(s) 150
BseMII CTCAG 2 cut(s) 203, 500
BseNI ACTGG 1 cut(s) 412
BseRI GAGGAG 7 cut(s) 98, 101, 110, 119, 122, 125, 128
BseSI GKGCMC 2 cut(s) 520, 565
BseXI GCAGC 3 cut(s) 185, 494, 580
BshNI GGYRCC 2 cut(s) 500, 545
BsiHKAI GWGCWC 2 cut(s) 520, 565
BsiSI CCGG 1 cut(s) 279
BslFI GGGAC 1 cut(s) 376
BsmAI GTCTC 2 cut(s) 55, 261
BsmBI CGTCTC 1 cut(s) 261
BsmFI GGGAC 1 cut(s) 376
Bsp1286I GDGCHC 2 cut(s) 520, 565
Bsp143I GATC 3 cut(s) 67, 155, 367
Bsp1720I GCTNAGC 1 cut(s) 486
Bsp19I CCATGG 1 cut(s) 382
BspACI CCGC 2 cut(s) 38, 260
BspCNI CTCAG 2 cut(s) 202, 499
BspLI GGNNCC 2 cut(s) 502, 547
BspMAI CTGCAG 1 cut(s) 598
BspMI ACCTGC 2 cut(s) 197, 436
BspPI GGATC 2 cut(s) 75, 163
BspT107I GGYRCC 2 cut(s) 500, 545
BsrDI GCAATG 1 cut(s) 150
BsrI ACTGG 1 cut(s) 412
BssECI CCNNGG 2 cut(s) 201, 382
BssMI GATC 3 cut(s) 67, 155, 367
BssT1I CCWWGG 1 cut(s) 382
Bst2UI CCWGG 5 cut(s) 203, 360, 492, 537, 582
BstAPI GCANNNNNTGC 1 cut(s) 179
BstDEI CTNAG 2 cut(s) 189, 486
BstDSI CCRYGG 1 cut(s) 382
BstENI CCTNNNNNAGG 1 cut(s) 630
BstKTI GATC 3 cut(s) 70, 158, 370
BstMAI GTCTC 2 cut(s) 55, 261
BstMBI GATC 3 cut(s) 67, 155, 367
BstMWI GCNNNNNNNGC 2 cut(s) 97, 179
BstNI CCWGG 5 cut(s) 203, 360, 492, 537, 582
BstSCI CCNGG 6 cut(s) 201, 278, 358, 490, 535, 580
BstSFI CTRYAG 2 cut(s) 477, 594
BstSLI GKGCMC 2 cut(s) 520, 565
BstV1I GCAGC 3 cut(s) 185, 494, 580
BstX2I RGATCY 1 cut(s) 155
BstXI CCANNNNNNTGG 1 cut(s) 209
BstYI RGATCY 1 cut(s) 155
BsuI GTATCC 1 cut(s) 593
BtgI CCRYGG 1 cut(s) 382
BtsI GCAGTG 1 cut(s) 234
BtsIMutI CAGTG 1 cut(s) 234
BveI ACCTGC 2 cut(s) 197, 436
CseI GACGC 1 cut(s) 243
CsiI ACCWGGT 1 cut(s) 358
CviAII CATG 2 cut(s) 374, 383
DdeI CTNAG 2 cut(s) 189, 486
DpnI GATC 3 cut(s) 69, 157, 369
DpnII GATC 3 cut(s) 67, 155, 367
EciI GGCGGA 1 cut(s) 249
Eco130I CCWWGG 1 cut(s) 382
EcoNI CCTNNNNNAGG 1 cut(s) 630
EcoRII CCWGG 5 cut(s) 201, 358, 490, 535, 580
EcoT14I CCWWGG 1 cut(s) 382
ErhI CCWWGG 1 cut(s) 382
Esp3I CGTCTC 1 cut(s) 261
FaeI CATG 2 cut(s) 377, 386
FaqI GGGAC 1 cut(s) 376
FatI CATG 2 cut(s) 373, 382
FbaI TGATCA 1 cut(s) 367
Fnu4HI GCNGC 3 cut(s) 174, 483, 594
Fsp4HI GCNGC 3 cut(s) 174, 483, 594
FspBI CTAG 1 cut(s) 465
GluI GCNGC 3 cut(s) 174, 483, 594
GsuI CTGGAG 1 cut(s) 171
HapII CCGG 1 cut(s) 279
HgaI GACGC 1 cut(s) 243
Hin1II CATG 2 cut(s) 377, 386
HinfI GANTC 1 cut(s) 418
HpaII CCGG 1 cut(s) 279
Hpy166II GTNNAC 2 cut(s) 518, 563
Hpy188I TCNGA 1 cut(s) 13
Hpy188III TCNNGA 4 cut(s) 28, 71, 332, 626
Hpy8I GTNNAC 2 cut(s) 518, 563
HpyAV CCTTC 5 cut(s) 25, 73, 112, 240, 621
HpyCH4V TGCA 4 cut(s) 182, 518, 563, 596
HpyF10VI GCNNNNNNNGC 2 cut(s) 97, 179
HpyF3I CTNAG 2 cut(s) 189, 486
Hsp92II CATG 2 cut(s) 377, 386
Ksp22I TGATCA 1 cut(s) 367
Kzo9I GATC 3 cut(s) 67, 155, 367
LmnI GCTCC 3 cut(s) 88, 97, 244
Lsp1109I GCAGC 3 cut(s) 185, 494, 580
MabI ACCWGGT 1 cut(s) 358
MaeI CTAG 1 cut(s) 465
MalI GATC 3 cut(s) 69, 157, 369
MboI GATC 3 cut(s) 67, 155, 367
MboII GAAGA 2 cut(s) 88, 150
MflI RGATCY 1 cut(s) 155
MhlI GDGCHC 2 cut(s) 520, 565
MlyI GAGTC 1 cut(s) 412
MmeI TCCRAC 1 cut(s) 112
MseI TTAA 1 cut(s) 54
MspA1I CMGCKG 1 cut(s) 176
MspI CCGG 1 cut(s) 279
MspR9I CCNGG 6 cut(s) 203, 280, 360, 492, 537, 582
MvaI CCWGG 5 cut(s) 203, 360, 492, 537, 582
MwoI GCNNNNNNNGC 2 cut(s) 97, 179
NciI CCSGG 1 cut(s) 280
NcoI CCATGG 1 cut(s) 382
NdeII GATC 3 cut(s) 67, 155, 367
NlaIII CATG 2 cut(s) 377, 386
NlaIV GGNNCC 2 cut(s) 502, 547
PaqCI CACCTGC 1 cut(s) 197
PflMI CCANNNNNTGG 5 cut(s) 497, 512, 542, 557, 587
PkrI GCNGC 3 cut(s) 175, 484, 595
PleI GAGTC 1 cut(s) 412
PpsI GAGTC 1 cut(s) 412
Psp6I CCWGG 5 cut(s) 201, 358, 490, 535, 580
PspGI CCWGG 5 cut(s) 201, 358, 490, 535, 580
PspN4I GGNNCC 2 cut(s) 502, 547
PstI CTGCAG 1 cut(s) 598
PsuI RGATCY 1 cut(s) 155
PvuII CAGCTG 1 cut(s) 176
SaqAI TTAA 1 cut(s) 54
SatI GCNGC 3 cut(s) 174, 483, 594
Sau3AI GATC 3 cut(s) 67, 155, 367
SchI GAGTC 1 cut(s) 412
ScrFI CCNGG 6 cut(s) 203, 280, 360, 492, 537, 582
SduI GDGCHC 2 cut(s) 520, 565
SexAI ACCWGGT 1 cut(s) 358
SfcI CTRYAG 2 cut(s) 477, 594
SmlI CTYRAG 1 cut(s) 330
SmoI CTYRAG 1 cut(s) 330
SsiI CCGC 2 cut(s) 38, 260
SspMI CTAG 1 cut(s) 465
StyD4I CCNGG 6 cut(s) 201, 278, 358, 490, 535, 580
StyI CCWWGG 1 cut(s) 382
TaqI TCGA 1 cut(s) 70
Tru1I TTAA 1 cut(s) 54
Tru9I TTAA 1 cut(s) 54
TscAI CASTG 1 cut(s) 241
TseI GCWGC 3 cut(s) 173, 482, 593
TspRI CASTG 1 cut(s) 241
Van91I CCANNNNNTGG 5 cut(s) 497, 512, 542, 557, 587
VneI GTGCAC 2 cut(s) 516, 561
XagI CCTNNNNNAGG 1 cut(s) 630
XspI CTAG 1 cut(s) 465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.