Rmu_co7986016.1_g000001

cytochrome P450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co7986016.1
Physical Location & Seq
Forward (+)
1 .. 390
390 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co7986016.1_g000001.1.cds

Sequence Viewer

Length: 390 bp
cctgttgttggccttgtaaggaaagctggaagagaagttacattgggaaaggtcattattcctgctgatcttgaactgtttgtctcagttctagcacttcaccatgaacctcaattctggggaccagatgtgcatcttttcaaaccagagagattttcagaaggggttgctaaagctactaaaaataatataggtgccttcatgccctttggcttgggacctcgaacttgtgtgggcttgaactttgcaaccactgaagctaagattgcactgtcaatgattctacaacgctactcgttctccctttcaccgggttatgtccactcgccctttcagtttgttacagttcgcccacaacatggagtccaagttatactgcagccattatga

Protein Analysis

129

Amino Acids

14.18

Weight (kDa)

9.59

Isoelectric Point (pI)

33.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 194
AccB7I CCANNNNNTGG 1 cut(s) 359
AcuI CTGAAG 1 cut(s) 276
AfiI CCNNNNNNNGG 3 cut(s) 8, 310, 359
AgsI TTSAA 3 cut(s) 74, 142, 241
AluBI AGCT 3 cut(s) 26, 176, 260
AluI AGCT 3 cut(s) 26, 176, 260
Alw26I GTCTC 1 cut(s) 88
AoxI GGCC 1 cut(s) 10
ApeKI GCWGC 1 cut(s) 379
AspS9I GGNCC 2 cut(s) 122, 218
AsuC2I CCSGG 1 cut(s) 312
AsuHPI GGTGA 2 cut(s) 92, 300
AvaII GGWCC 2 cut(s) 122, 218
BanI GGYRCC 1 cut(s) 194
BarI GAAGNNNNNNTAC 2 cut(s) 22, 54
BcnI CCSGG 1 cut(s) 312
BcoDI GTCTC 1 cut(s) 88
BfaI CTAG 1 cut(s) 92
BfmI CTRYAG 1 cut(s) 377
BisI GCNGC 1 cut(s) 380
BlsI GCNGC 1 cut(s) 381
Bme1390I CCNGG 1 cut(s) 312
Bme18I GGWCC 2 cut(s) 122, 218
BmgT120I GGNCC 2 cut(s) 122, 218
BmiI GGNNCC 3 cut(s) 123, 196, 219
BmrFI CCNGG 1 cut(s) 312
BmsI GCATC 1 cut(s) 142
BpuMI CCSGG 1 cut(s) 312
BsaBI GATNNNNATC 1 cut(s) 132
BsaXI ACNNNNNCTCC 4 cut(s) 284, 314, 354, 384
Bsc4I CCNNNNNNNGG 3 cut(s) 8, 310, 359
Bse8I GATNNNNATC 1 cut(s) 132
BseJI GATNNNNATC 1 cut(s) 132
BseLI CCNNNNNNNGG 3 cut(s) 8, 310, 359
BseMII CTCAG 1 cut(s) 99
BshFI GGCC 1 cut(s) 12
BshNI GGYRCC 1 cut(s) 194
BsiSI CCGG 1 cut(s) 311
BslFI GGGAC 2 cut(s) 135, 231
BslI CCNNNNNNNGG 3 cut(s) 8, 310, 359
BsmAI GTCTC 1 cut(s) 88
BsmFI GGGAC 2 cut(s) 135, 231
BsnI GGCC 1 cut(s) 12
Bsp143I GATC 1 cut(s) 67
BspANI GGCC 1 cut(s) 12
BspCNI CTCAG 1 cut(s) 98
BspLI GGNNCC 3 cut(s) 123, 196, 219
BspMAI CTGCAG 1 cut(s) 381
BspT107I GGYRCC 1 cut(s) 194
BssMI GATC 1 cut(s) 67
Bst4CI ACNGT 3 cut(s) 78, 273, 346
Bst6I CTCTTC 1 cut(s) 25
BstDEI CTNAG 2 cut(s) 85, 261
BstKTI GATC 1 cut(s) 70
BstMAI GTCTC 1 cut(s) 88
BstMBI GATC 1 cut(s) 67
BstMWI GCNNNNNNNGC 1 cut(s) 266
BstSCI CCNGG 1 cut(s) 310
BstSFI CTRYAG 1 cut(s) 377
BsuRI GGCC 1 cut(s) 12
BtsIMutI CAGTG 2 cut(s) 252, 269
Cfr13I GGNCC 2 cut(s) 122, 218
CviAII CATG 3 cut(s) 104, 202, 359
CviJI RGCY 7 cut(s) 12, 26, 176, 213, 237, 260, 382
CviKI_1 RGCY 7 cut(s) 12, 26, 176, 213, 237, 260, 382
DdeI CTNAG 2 cut(s) 85, 261
DpnI GATC 1 cut(s) 69
DpnII GATC 1 cut(s) 67
Eam1104I CTCTTC 1 cut(s) 25
EarI CTCTTC 1 cut(s) 25
Eco47I GGWCC 2 cut(s) 122, 218
Eco57I CTGAAG 1 cut(s) 276
EcoO109I RGGNCCY 1 cut(s) 218
FaeI CATG 3 cut(s) 107, 205, 362
FaiI YATR 7 cut(s) 105, 191, 203, 318, 360, 374, 388
FaqI GGGAC 2 cut(s) 135, 231
FatI CATG 3 cut(s) 103, 201, 358
Fnu4HI GCNGC 1 cut(s) 380
Fsp4HI GCNGC 1 cut(s) 380
FspBI CTAG 1 cut(s) 92
GluI GCNGC 1 cut(s) 380
HaeIII GGCC 1 cut(s) 12
HapII CCGG 1 cut(s) 311
Hin1II CATG 3 cut(s) 107, 205, 362
HinfI GANTC 2 cut(s) 280, 363
HpaII CCGG 1 cut(s) 311
HphI GGTGA 2 cut(s) 92, 300
Hpy166II GTNNAC 1 cut(s) 322
Hpy188I TCNGA 1 cut(s) 160
Hpy188III TCNNGA 1 cut(s) 71
Hpy8I GTNNAC 1 cut(s) 322
HpyAV CCTTC 2 cut(s) 155, 208
HpyCH4III ACNGT 3 cut(s) 78, 273, 346
HpyCH4V TGCA 4 cut(s) 133, 248, 269, 379
HpyF10VI GCNNNNNNNGC 1 cut(s) 266
HpyF3I CTNAG 2 cut(s) 85, 261
Hsp92II CATG 3 cut(s) 107, 205, 362
Kzo9I GATC 1 cut(s) 67
LpnPI CCDG 7 cut(s) 12, 15, 75, 103, 138, 159, 324
LweI GCATC 1 cut(s) 142
MaeI CTAG 1 cut(s) 92
MaeIII GTNAC 2 cut(s) 37, 340
MalI GATC 1 cut(s) 69
MboI GATC 1 cut(s) 67
MboII GAAGA 1 cut(s) 42
MluCI AATT 1 cut(s) 113
MlyI GAGTC 1 cut(s) 372
MnlI CCTC 2 cut(s) 120, 231
MspI CCGG 1 cut(s) 311
MspR9I CCNGG 1 cut(s) 312
MwoI GCNNNNNNNGC 1 cut(s) 266
NciI CCSGG 1 cut(s) 312
NdeII GATC 1 cut(s) 67
NlaIII CATG 3 cut(s) 107, 205, 362
NlaIV GGNNCC 3 cut(s) 123, 196, 219
PfeI GAWTC 1 cut(s) 280
PflMI CCANNNNNTGG 1 cut(s) 359
PkrI GCNGC 1 cut(s) 381
PleI GAGTC 1 cut(s) 371
PpsI GAGTC 1 cut(s) 371
PpuMI RGGWCCY 1 cut(s) 218
Psp5II RGGWCCY 1 cut(s) 218
PspN4I GGNNCC 3 cut(s) 123, 196, 219
PspPI GGNCC 2 cut(s) 122, 218
PspPPI RGGWCCY 1 cut(s) 218
PstI CTGCAG 1 cut(s) 381
SatI GCNGC 1 cut(s) 380
Sau3AI GATC 1 cut(s) 67
Sau96I GGNCC 2 cut(s) 122, 218
SchI GAGTC 1 cut(s) 372
ScrFI CCNGG 1 cut(s) 312
SetI ASST 7 cut(s) 28, 54, 112, 178, 196, 223, 262
SfaNI GCATC 1 cut(s) 142
SfcI CTRYAG 1 cut(s) 377
SinI GGWCC 2 cut(s) 122, 218
Sse9I AATT 1 cut(s) 113
SspMI CTAG 1 cut(s) 92
StyD4I CCNGG 1 cut(s) 310
TaaI ACNGT 3 cut(s) 78, 273, 346
TaqI TCGA 1 cut(s) 223
TasI AATT 1 cut(s) 113
TfiI GAWTC 1 cut(s) 280
TscAI CASTG 2 cut(s) 259, 276
TseI GCWGC 1 cut(s) 379
TspDTI ATGAA 2 cut(s) 120, 190
TspRI CASTG 2 cut(s) 259, 276
Van91I CCANNNNNTGG 1 cut(s) 359
VpaK11BI GGWCC 2 cut(s) 122, 218
XspI CTAG 1 cut(s) 92
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.