Rorug04G0303200

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000078
Physical Location & Seq
Forward (+)
47844904 .. 47847281
2378 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0303200.1

Sequence Viewer

Length: 1740 bp
ATGGAGCTCTACTCCGCTCACCACCACTATCTCCTTCGTCATCAGGACCCAATACCCAGATTACTCCTCCGCACTGTACGGGTATTCCACAGCACTCTGCCTCCACATAGATGTCACCGTCGGATTCGACGACGGCGGTGTCTCTCAACAACGACGGCGGCCCTGATGGAACAGACGGGAGGGAAAATGGTGGTGGAGCTGGTCGGAGCTTTCAACGAGCTCACAGAAAGGATGGGCATGCTCTCCAGCAGCGGGTCCCACTTACTCTTCAAAGCTCTCAAGCTGTCGATTCCCTTACTCCACGCCTTGCCTATAACCCCGGACGGTCGTTCTTCACTCTCCAAGGCCTTGGCTTTCGCCTTAATTCTCGCAGACCTTCAGATGGATGCGGAGGTGATTTCAGCTGGGATGCTCAGACCAGTTCTGGAGGCCGGAGCGATTTCGATACTCGAGGTTCGAAACCAGATTGGTACCGGCACTGCTCATTTGTTACACGAGAGCTTGCGTGTGATGAAAATCCCAACTAAAGTTGATGTCTTGGATGATGATAGTGCTGCTGCATTGAGAAAATTCTGCTTGACATATTATGATATGAGGGCTGTGATTTTGGACTTGGTTCTCAGGCTTGATATAATGAGGCACCTCGATTATCTTCCGAGGTATCAGCAGCAGTTGGTAGCTCTGGAGGTGATGAAGATTCATGCACCTTTAGCTCATGCTGTTGGGGCTAATTGGTTGTCATTGGAGCTTGAGGATTTGTCATTTCAGTACTTGTTTCCGAATTCGTATTTGTATGTGGATACATGGTTGAGGAGTCATGAGACTGGAAGTAGGCCTTTGGTGGATGTGTACAAGGAGCAGCTTTTACATTCGTTGAAAGAGGATCCCTTGTTGGCGGGGCTGGTTGTGGATGTGTCAGTGAATGGGAGATATAAGAGTCGGTATAGCACCATGAAGAAGCTGTTGAAGGATGGTAGGAAGCCGGAACAGGTAAATGACGTGCTGGGGTTGCGAGTCATATTGGAGCCGAGGTCTGGAGAAGATGAGGCAGAAATGGGGGAAAGAGCATGTTATAGGACTCGTGAAGTTGTTCTGTCATTGTGGAAAGAGATGCCTCACAGGACAAAGGATTACATTGCTAGGCCTAAGGCGAATGGGTATAGGAGTTTGCATATGGCAGTTGATGTGAGTGACGGTGGCAAGAGTAGACCTTTAATGGAAATACAAATAAGGACTCAGGAGATGGATATGTTGGCAGATGCTGGGACAGCATCCCACTCTTTGTACAAGAGTGGTCTAACAGACCCTGAAGAGGCAAAGCGGCTCAAGGCCATAATGATGGCTGCGGCTGAACTTGCAGCATTTCGCCTTAAAGATCTTCCATCGGCCCATCATGAAGGCATAGAGACTGAGCAAAGTAAGAGTGATAGAGTGTTCCGCCTTCTTGACAAGAATGGTGATGGAAGAATCAATATTGAGGAACTTAAGGAAGTGATGGAAGAGCTCGGTGCTCCAGGGGAAGATGCATGCGAGATGATGCAACTCCTTGATGCTAATAGCGATGGTTCTCTTAGCTCAGATGAATTTGATTTGTTTCAGAAACAGGTCGAGTTTATGCGTAATTTTGAGGACAGAGATGAGCAGTACAAAACTGAATTGAATGAGAAACTTCAGATTGCAGAAAACAACAGCTTGATCCAGGTATATTCTGAAGATCTTAGCGGCAGCATTGCAAACTAG

Protein Analysis

579

Amino Acids

65.54

Weight (kDa)

5.99

Isoelectric Point (pI)

39.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HD_4 PF13328 103 - 242 4.8e-23 HD domain
RelA_SpoT PF04607 309 - 432 2.4e-30 Region found in RelA / SpoT proteins
EF-hand_1 PF00036 476 - 501 2.7e-07 EF hand domain
EF-hand_7 PF13499 477 - 529 7.3e-10 EF-hand domain pair
EF-hand_6 PF13405 477 - 503 5.8e-06 EF-hand domain
EF-hand_5 PF13202 478 - 499 2e-06 EF hand
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 138
Acc65I GGTACC 1 cut(s) 470
AccB1I GGYRCC 2 cut(s) 470, 639
AccBSI CCGCTC 1 cut(s) 17
AccI GTMKAC 1 cut(s) 1207
AclWI GGATC 3 cut(s) 878, 891, 1690
AcsI RAATTY 3 cut(s) 569, 781, 1583
AcuI CTGAAG 4 cut(s) 362, 1329, 1655, 1731
AfaI GTAC 6 cut(s) 78, 472, 770, 851, 1286, 1646
AfiI CCNNNNNNNGG 4 cut(s) 252, 382, 1034, 1312
AflII CTTAAG 1 cut(s) 1484
AgsI TTSAA 5 cut(s) 214, 271, 877, 967, 1660
AjiI CACGTC 1 cut(s) 1000
AjnI CCWGG 2 cut(s) 1513, 1698
Alw21I GWGCWC 4 cut(s) 9, 222, 1506, 1513
Alw26I GTCTC 3 cut(s) 146, 815, 1400
AlwI GGATC 3 cut(s) 878, 891, 1690
AlwNI CAGNNNCTG 2 cut(s) 1262, 1307
Ama87I CYCGRG 1 cut(s) 449
AoxI GGCC 7 cut(s) 159, 345, 429, 833, 1142, 1329, 1386
ApeKI GCWGC 8 cut(s) 249, 554, 557, 667, 859, 1343, 1358, 1725
ApoI RAATTY 3 cut(s) 569, 781, 1583
Asp700I GAANNNNTTC 1 cut(s) 1089
Asp718I GGTACC 1 cut(s) 470
AspS9I GGNCC 4 cut(s) 46, 160, 255, 1387
AsuC2I CCSGG 1 cut(s) 320
AsuHPI GGTGA 5 cut(s) 11, 107, 406, 700, 1469
AsuII TTCGAA 1 cut(s) 457
AvaI CYCGRG 1 cut(s) 449
AvaII GGWCC 2 cut(s) 46, 255
AxyI CCTNAGG 1 cut(s) 1146
BamHI GGATCC 1 cut(s) 883
BanI GGYRCC 2 cut(s) 470, 639
BanII GRGCYC 3 cut(s) 9, 222, 1506
BauI CACGAG 2 cut(s) 494, 1080
Bbv12I GWGCWC 4 cut(s) 9, 222, 1506, 1513
BbvI GCAGC 7 cut(s) 261, 541, 544, 679, 871, 1330, 1370
BceAI ACGGC 2 cut(s) 149, 171
BciT130I CCWGG 2 cut(s) 1515, 1700
BciVI GTATCC 1 cut(s) 793
BcnI CCSGG 1 cut(s) 320
BcoDI GTCTC 3 cut(s) 146, 815, 1400
BfaI CTAG 2 cut(s) 1140, 1738
BfrI CTTAAG 1 cut(s) 1484
BfuI GTATCC 1 cut(s) 793
BglII AGATCT 2 cut(s) 1375, 1714
BmcAI AGTACT 1 cut(s) 770
Bme1390I CCNGG 3 cut(s) 320, 1515, 1700
Bme18I GGWCC 2 cut(s) 46, 255
BmeT110I CYCGRG 1 cut(s) 449
BmgBI CACGTC 1 cut(s) 1000
BmgT120I GGNCC 4 cut(s) 46, 160, 255, 1387
BmiI GGNNCC 7 cut(s) 48, 256, 257, 472, 641, 885, 1026
BmrFI CCNGG 3 cut(s) 320, 1515, 1700
BmsI GCATC 8 cut(s) 376, 399, 1101, 1249, 1280, 1513, 1527, 1540
BplI GAGNNNNNCTC 1 cut(s) 28
BpmI CTGGAG 5 cut(s) 229, 446, 704, 1056, 1497
Bpu14I TTCGAA 1 cut(s) 457
BpuEI CTTGAG 3 cut(s) 263, 770, 1310
BpuMI CCSGG 1 cut(s) 320
BsaBI GATNNNNATC 1 cut(s) 515
BsaJI CCNNGG 6 cut(s) 318, 342, 348, 656, 1028, 1514
BsaXI ACNNNNNCTCC 4 cut(s) 85, 115, 1016, 1046
Bsc4I CCNNNNNNNGG 4 cut(s) 252, 382, 1034, 1312
Bse118I RCCGGY 1 cut(s) 473
Bse1I ACTGG 2 cut(s) 419, 829
Bse21I CCTNAGG 1 cut(s) 1146
Bse3DI GCAATG 2 cut(s) 1134, 1728
Bse8I GATNNNNATC 1 cut(s) 515
BseBI CCWGG 2 cut(s) 1515, 1700
BseDI CCNNGG 6 cut(s) 318, 342, 348, 656, 1028, 1514
BseGI GGATG 8 cut(s) 237, 391, 414, 547, 850, 916, 976, 1271
BseJI GATNNNNATC 1 cut(s) 515
BseLI CCNNNNNNNGG 4 cut(s) 252, 382, 1034, 1312
BseMI GCAATG 2 cut(s) 1134, 1728
BseMII CTCAG 5 cut(s) 427, 634, 1250, 1401, 1590
BseNI ACTGG 2 cut(s) 419, 829
BseRI GAGGAG 2 cut(s) 56, 826
BseXI GCAGC 7 cut(s) 261, 541, 544, 679, 871, 1330, 1370
BseYI CCCAGC 3 cut(s) 404, 1003, 1262
Bsh1285I CGRYCG 1 cut(s) 328
BshFI GGCC 7 cut(s) 161, 347, 431, 835, 1144, 1331, 1388
BshNI GGYRCC 2 cut(s) 470, 639
BsiEI CGRYCG 1 cut(s) 328
BsiHKAI GWGCWC 4 cut(s) 9, 222, 1506, 1513
BsiHKCI CYCGRG 1 cut(s) 449
BsiSI CCGG 4 cut(s) 320, 432, 474, 983
BslFI GGGAC 2 cut(s) 241, 1279
BslI CCNNNNNNNGG 4 cut(s) 252, 382, 1034, 1312
BsmAI GTCTC 3 cut(s) 146, 815, 1400
BsmFI GGGAC 2 cut(s) 241, 1279
BsnI GGCC 7 cut(s) 161, 347, 431, 835, 1144, 1331, 1388
BsoBI CYCGRG 1 cut(s) 449
Bsp119I TTCGAA 1 cut(s) 457
Bsp1286I GDGCHC 4 cut(s) 9, 222, 1506, 1513
Bsp1407I TGTACA 2 cut(s) 849, 1284
Bsp143I GATC 4 cut(s) 883, 1375, 1695, 1714
BspANI GGCC 7 cut(s) 161, 347, 431, 835, 1144, 1331, 1388
BspCNI CTCAG 5 cut(s) 426, 633, 1249, 1402, 1589
BspHI TCATGA 2 cut(s) 817, 1393
BspLI GGNNCC 7 cut(s) 48, 256, 257, 472, 641, 885, 1026
BspPI GGATC 3 cut(s) 878, 891, 1690
BspQI GCTCTTC 1 cut(s) 1494
BspT104I TTCGAA 1 cut(s) 457
BspT107I GGYRCC 2 cut(s) 470, 639
BspTI CTTAAG 1 cut(s) 1484
BsrBI CCGCTC 1 cut(s) 17
BsrDI GCAATG 2 cut(s) 1134, 1728
BsrFI RCCGGY 1 cut(s) 473
BsrGI TGTACA 2 cut(s) 849, 1284
BsrI ACTGG 2 cut(s) 419, 829
BssAI RCCGGY 1 cut(s) 473
BssECI CCNNGG 6 cut(s) 318, 342, 348, 656, 1028, 1514
BssMI GATC 4 cut(s) 883, 1375, 1695, 1714
BssSI CACGAG 2 cut(s) 494, 1080
BssT1I CCWWGG 2 cut(s) 342, 348
Bst2BI CACGAG 2 cut(s) 494, 1080
Bst2UI CCWGG 2 cut(s) 1515, 1700
Bst4CI ACNGT 4 cut(s) 76, 119, 326, 1196
Bst6I CTCTTC 3 cut(s) 272, 1305, 1494
BstAFI CTTAAG 1 cut(s) 1484
BstAUI TGTACA 2 cut(s) 849, 1284
BstBI TTCGAA 1 cut(s) 457
BstC8I GCNNGC 3 cut(s) 239, 503, 1528
BstDEI CTNAG 8 cut(s) 413, 620, 1146, 1236, 1410, 1571, 1576, 1718
BstF5I GGATG 8 cut(s) 237, 391, 414, 547, 850, 916, 976, 1271
BstKTI GATC 4 cut(s) 886, 1378, 1698, 1717
BstMAI GTCTC 3 cut(s) 146, 815, 1400
BstMBI GATC 4 cut(s) 883, 1375, 1695, 1714
BstMCI CGRYCG 1 cut(s) 328
BstMWI GCNNNNNNNGC 5 cut(s) 710, 725, 1009, 1268, 1355
BstNI CCWGG 2 cut(s) 1515, 1700
BstNSI RCATGY 3 cut(s) 241, 1071, 1530
BstSCI CCNGG 3 cut(s) 318, 1513, 1698
BstV1I GCAGC 7 cut(s) 261, 541, 544, 679, 871, 1330, 1370
BstX2I RGATCY 3 cut(s) 883, 1375, 1714
BstXI CCANNNNNNTGG 2 cut(s) 349, 1339
BstYI RGATCY 3 cut(s) 883, 1375, 1714
Bsu36I CCTNAGG 1 cut(s) 1146
BsuI GTATCC 1 cut(s) 793
BsuRI GGCC 7 cut(s) 161, 347, 431, 835, 1144, 1331, 1388
BtgZI GCGATG 1 cut(s) 1575
BtrI CACGTC 1 cut(s) 1000
BtsCI GGATG 8 cut(s) 237, 391, 414, 547, 850, 916, 976, 1271
BtsI GCAGTG 1 cut(s) 477
BtsIMutI CAGTG 3 cut(s) 72, 477, 924
Cac8I GCNNGC 3 cut(s) 239, 503, 1528
CaiI CAGNNNCTG 2 cut(s) 1262, 1307
CciI TCATGA 2 cut(s) 817, 1393
Cfr10I RCCGGY 1 cut(s) 473
Cfr13I GGNCC 4 cut(s) 46, 160, 255, 1387
Csp6I GTAC 6 cut(s) 77, 471, 769, 850, 1285, 1645
CviAII CATG 9 cut(s) 238, 701, 716, 804, 818, 952, 1068, 1394, 1527
CviQI GTAC 6 cut(s) 77, 471, 769, 850, 1285, 1645
DdeI CTNAG 8 cut(s) 413, 620, 1146, 1236, 1410, 1571, 1576, 1718
DpnI GATC 4 cut(s) 885, 1377, 1697, 1716
DpnII GATC 4 cut(s) 883, 1375, 1695, 1714
DrdI GACNNNNNNGTC 1 cut(s) 138
DseDI GACNNNNNNGTC 1 cut(s) 138
Eam1104I CTCTTC 3 cut(s) 272, 1305, 1494
EarI CTCTTC 3 cut(s) 272, 1305, 1494
EciI GGCGGA 1 cut(s) 1427
Ecl136II GAGCTC 3 cut(s) 7, 220, 1504
Eco130I CCWWGG 2 cut(s) 342, 348
Eco147I AGGCCT 3 cut(s) 347, 835, 1144
Eco24I GRGCYC 3 cut(s) 9, 222, 1506
Eco47I GGWCC 2 cut(s) 46, 255
Eco53kI GAGCTC 3 cut(s) 7, 220, 1504
Eco57I CTGAAG 4 cut(s) 362, 1329, 1655, 1731
Eco81I CCTNAGG 1 cut(s) 1146
Eco88I CYCGRG 1 cut(s) 449
EcoICRI GAGCTC 3 cut(s) 7, 220, 1504
EcoO109I RGGNCCY 2 cut(s) 46, 255
EcoRI GAATTC 1 cut(s) 781
EcoRII CCWGG 2 cut(s) 1513, 1698
EcoT14I CCWWGG 2 cut(s) 342, 348
EcoT22I ATGCAT 1 cut(s) 1528
EcoT38I GRGCYC 3 cut(s) 9, 222, 1506
ErhI CCWWGG 2 cut(s) 342, 348
FaeI CATG 9 cut(s) 241, 704, 719, 807, 821, 955, 1071, 1397, 1530
FalI AAGNNNNNCTT 2 cut(s) 820, 852
FaqI GGGAC 2 cut(s) 241, 1279
FatI CATG 9 cut(s) 237, 700, 715, 803, 817, 951, 1067, 1393, 1526
FauI CCCGC 2 cut(s) 245, 889
FauNDI CATATG 1 cut(s) 1173
FblI GTMKAC 1 cut(s) 1207
FokI GGATG 8 cut(s) 244, 398, 421, 554, 857, 923, 983, 1258
FriOI GRGCYC 3 cut(s) 9, 222, 1506
FspBI CTAG 2 cut(s) 1140, 1738
GsaI CCCAGC 3 cut(s) 408, 1007, 1266
GsuI CTGGAG 5 cut(s) 229, 446, 704, 1056, 1497
HaeIII GGCC 7 cut(s) 161, 347, 431, 835, 1144, 1331, 1388
HapII CCGG 4 cut(s) 320, 432, 474, 983
Hin1II CATG 9 cut(s) 241, 704, 719, 807, 821, 955, 1071, 1397, 1530
HinfI GANTC 9 cut(s) 124, 289, 697, 814, 937, 1014, 1078, 1234, 1467
HpaII CCGG 4 cut(s) 320, 432, 474, 983
HphI GGTGA 5 cut(s) 11, 107, 406, 700, 1469
Hpy166II GTNNAC 2 cut(s) 850, 1208
Hpy188III TCNNGA 9 cut(s) 44, 425, 683, 818, 1035, 1082, 1238, 1394, 1445
Hpy8I GTNNAC 2 cut(s) 850, 1208
Hpy99I CGWCG 4 cut(s) 123, 132, 135, 157
HpyAV CCTTC 5 cut(s) 44, 386, 961, 1391, 1451
HpyCH4III ACNGT 4 cut(s) 76, 119, 326, 1196
HpyCH4IV ACGT 1 cut(s) 999
HpyCH4V TGCA 8 cut(s) 560, 704, 1171, 1358, 1526, 1540, 1679, 1733
HpyF10VI GCNNNNNNNGC 5 cut(s) 710, 725, 1009, 1268, 1355
HpyF3I CTNAG 8 cut(s) 413, 620, 1146, 1236, 1410, 1571, 1576, 1718
HpySE526I ACGT 1 cut(s) 999
Hsp92II CATG 9 cut(s) 241, 704, 719, 807, 821, 955, 1071, 1397, 1530
KflI GGGWCCC 1 cut(s) 255
KpnI GGTACC 1 cut(s) 474
Kzo9I GATC 4 cut(s) 883, 1375, 1695, 1714
LguI GCTCTTC 1 cut(s) 1494
LmnI GCTCC 8 cut(s) 4, 196, 206, 434, 745, 856, 1024, 1516
Lsp1109I GCAGC 7 cut(s) 261, 541, 544, 679, 871, 1330, 1370
LweI GCATC 8 cut(s) 376, 399, 1101, 1249, 1280, 1513, 1527, 1540
MaeI CTAG 2 cut(s) 1140, 1738
MaeII ACGT 1 cut(s) 999
MaeIII GTNAC 3 cut(s) 113, 489, 1190
MalI GATC 4 cut(s) 885, 1377, 1697, 1716
MbiI CCGCTC 1 cut(s) 17
MboI GATC 4 cut(s) 883, 1375, 1695, 1714
MflI RGATCY 3 cut(s) 883, 1375, 1714
MhlI GDGCHC 4 cut(s) 9, 222, 1506, 1513
MluCI AATT 7 cut(s) 363, 569, 730, 781, 1583, 1621, 1655
MlyI GAGTC 5 cut(s) 823, 946, 1023, 1072, 1228
MmeI TCCRAC 2 cut(s) 101, 184
Mph1103I ATGCAT 1 cut(s) 1528
MroXI GAANNNNTTC 1 cut(s) 1089
MseI TTAA 4 cut(s) 362, 1214, 1371, 1485
MslI CAYNNNNRTG 2 cut(s) 109, 1337
MspA1I CMGCKG 2 cut(s) 252, 404
MspCI CTTAAG 1 cut(s) 1484
MspI CCGG 4 cut(s) 320, 432, 474, 983
MspR9I CCNGG 3 cut(s) 320, 1515, 1700
MvaI CCWGG 2 cut(s) 1515, 1700
MwoI GCNNNNNNNGC 5 cut(s) 710, 725, 1009, 1268, 1355
NciI CCSGG 1 cut(s) 320
NdeI CATATG 1 cut(s) 1173
NdeII GATC 4 cut(s) 883, 1375, 1695, 1714
NlaIII CATG 9 cut(s) 241, 704, 719, 807, 821, 955, 1071, 1397, 1530
NlaIV GGNNCC 7 cut(s) 48, 256, 257, 472, 641, 885, 1026
NmeAIII GCCGAG 1 cut(s) 1053
NmuCI GTSAC 2 cut(s) 113, 1190
NsiI ATGCAT 1 cut(s) 1528
NspI RCATGY 3 cut(s) 241, 1071, 1530
NspV TTCGAA 1 cut(s) 457
PaeI GCATGC 2 cut(s) 241, 1530
PaeR7I CTCGAG 1 cut(s) 449
PagI TCATGA 2 cut(s) 817, 1393
PceI AGGCCT 3 cut(s) 347, 835, 1144
PciSI GCTCTTC 1 cut(s) 1494
PcsI WCGNNNNNNNCGW 1 cut(s) 127
PdmI GAANNNNTTC 1 cut(s) 1089
PfeI GAWTC 4 cut(s) 124, 289, 697, 1467
PleI GAGTC 5 cut(s) 822, 945, 1022, 1072, 1228
PpsI GAGTC 5 cut(s) 822, 945, 1022, 1072, 1228
PpuMI RGGWCCY 2 cut(s) 46, 255
Psp124BI GAGCTC 3 cut(s) 9, 222, 1506
Psp5II RGGWCCY 2 cut(s) 46, 255
Psp6I CCWGG 2 cut(s) 1513, 1698
PspFI CCCAGC 3 cut(s) 404, 1003, 1262
PspGI CCWGG 2 cut(s) 1513, 1698
PspN4I GGNNCC 7 cut(s) 48, 256, 257, 472, 641, 885, 1026
PspPI GGNCC 4 cut(s) 46, 160, 255, 1387
PspPPI RGGWCCY 2 cut(s) 46, 255
PspXI VCTCGAGB 1 cut(s) 449
PstNI CAGNNNCTG 2 cut(s) 1262, 1307
PsuI RGATCY 3 cut(s) 883, 1375, 1714
PvuII CAGCTG 1 cut(s) 404
RsaI GTAC 6 cut(s) 78, 472, 770, 851, 1286, 1646
RsaNI GTAC 6 cut(s) 77, 471, 769, 850, 1285, 1645
RseI CAYNNNNRTG 2 cut(s) 109, 1337
SacI GAGCTC 3 cut(s) 9, 222, 1506
SapI GCTCTTC 1 cut(s) 1494
SaqAI TTAA 4 cut(s) 362, 1214, 1371, 1485
Sau3AI GATC 4 cut(s) 883, 1375, 1695, 1714
Sau96I GGNCC 4 cut(s) 46, 160, 255, 1387
ScaI AGTACT 1 cut(s) 770
SchI GAGTC 5 cut(s) 823, 946, 1023, 1072, 1228
ScrFI CCNGG 3 cut(s) 320, 1515, 1700
SduI GDGCHC 4 cut(s) 9, 222, 1506, 1513
SfaNI GCATC 8 cut(s) 376, 399, 1101, 1249, 1280, 1513, 1527, 1540
Sfr274I CTCGAG 1 cut(s) 449
SfuI TTCGAA 1 cut(s) 457
SinI GGWCC 2 cut(s) 46, 255
SlaI CTCGAG 1 cut(s) 449
SmiMI CAYNNNNRTG 2 cut(s) 109, 1337
SmlI CTYRAG 5 cut(s) 278, 449, 749, 1325, 1484
SmoI CTYRAG 5 cut(s) 278, 449, 749, 1325, 1484
SphI GCATGC 2 cut(s) 241, 1530
Sse9I AATT 7 cut(s) 363, 569, 730, 781, 1583, 1621, 1655
SseBI AGGCCT 3 cut(s) 347, 835, 1144
SspI AATATT 1 cut(s) 1474
SspMI CTAG 2 cut(s) 1140, 1738
SstI GAGCTC 3 cut(s) 9, 222, 1506
StuI AGGCCT 3 cut(s) 347, 835, 1144
StyD4I CCNGG 3 cut(s) 318, 1513, 1698
StyI CCWWGG 2 cut(s) 342, 348
TaaI ACNGT 4 cut(s) 76, 119, 326, 1196
TaiI ACGT 1 cut(s) 1002
TaqI TCGA 7 cut(s) 127, 287, 443, 450, 457, 645, 1608
TasI AATT 7 cut(s) 363, 569, 730, 781, 1583, 1621, 1655
TatI WGTACW 4 cut(s) 768, 849, 1284, 1644
TauI GCSGC 4 cut(s) 161, 1324, 1349, 1725
TfiI GAWTC 4 cut(s) 124, 289, 697, 1467
Tru1I TTAA 4 cut(s) 362, 1214, 1371, 1485
Tru9I TTAA 4 cut(s) 362, 1214, 1371, 1485
TscAI CASTG 3 cut(s) 79, 484, 924
TseFI GTSAC 2 cut(s) 113, 1190
TseI GCWGC 8 cut(s) 249, 554, 557, 667, 859, 1343, 1358, 1725
Tsp45I GTSAC 2 cut(s) 113, 1190
TspDTI ATGAA 6 cut(s) 527, 689, 707, 968, 1410, 1596
TspRI CASTG 3 cut(s) 79, 484, 924
Vha464I CTTAAG 1 cut(s) 1484
VpaK11BI GGWCC 2 cut(s) 46, 255
XapI RAATTY 3 cut(s) 569, 781, 1583
XceI RCATGY 3 cut(s) 241, 1071, 1530
XhoI CTCGAG 1 cut(s) 449
XmiI GTMKAC 1 cut(s) 1207
XmnI GAANNNNTTC 1 cut(s) 1089
XspI CTAG 2 cut(s) 1140, 1738
ZrmI AGTACT 1 cut(s) 770
Zsp2I ATGCAT 1 cut(s) 1528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.