Rorug04G0302600

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000078
Physical Location & Seq
Forward (+)
47800180 .. 47803888
3709 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0302600.1

Sequence Viewer

Length: 1110 bp
ATGGCGGTGAAGAAGGCGTGCGAGTCCTTCTCGAAGAGCTTGATTGACGAGGTGCAGAGATGGGGGTGTATGAAGCAGACGGGGGTGAGTTTGAGGTACATGATGGAGTTTGGGTCGGAGCCGACGTTGAGGAATTTGTTGATTTCGGCCCAGTTTCTGCATAAGGAGTTGCCTATCAGGATTGCCAGGAGGGCTAATGAGCTCGAGACTCTGCCTTATGGCTTGTCCGAGAAACCTGCTGTCTTGAAGGTACGAGACTGGTATTTGGATTCATTTCGCGACCTGAGATCCTTTCCTGACATCAAGGATGAAAATGATGAGAAGGATTTTACACAAATGATCAAGGCGATCAAGGTGAGACACAACAATGTCGTTCCCATGATGGCTTTAGGTGTTCAACAGTTGAAGAAAGGCGTAAATCCAAAGATTGTCTATGAGGATCTTGATGAGATTCACCAATTTTTGGACCGCTTCTACATGTCGAGAATTGGAATTCGCATGCTGATCGGCCAGCATGTTGAGTTGCACAATCCCAATCCCCCTCCTCATTGTGTGGGTTACATACATACAAAAATGTCTCCACTGGAGGTAGCACGAAATGCCAGTGAGGATGCTCGCTCGATTTGCTTTCATGAGTATGGCAGTGCACCTAACGTCAACATCTATGGGGATCCTGATTTTACCTTCCCATATGTTCCTACACACTTACATCTTATGGTCTTTGAGTTGGTTAAGAATTCTCTGCGTGCTGTCCAAGAGCGTTTTATGGACTCGGACAAAGTTGCACCTCCTATTAGAATTATAGTTGCTGATGGAATTGAAGATGTTACGATCAAGGTCTCAGATGAGGGCGGTGGCATACCAAGAAGTGGACTCCCCAAAATTTTCACATATCTTTATAGCACTGCAGCGAACCATGTGGATGAGCAGACAGATCTTGGGACTACTGATTCAGTTACAATGGCTGGATATGGGTATGGGCTTCCTATAAGCCGCTTGTATGCTAGGTATTTTGGAGGAGATCTGCAAATAATCTCTATGGAAGGATACGGGACTGATGCATACCTCCATTTGTCTCGGTTGGGAGATTCACAGGAGCCTTTGCCATGA

Protein Analysis

369

Amino Acids

41.85

Weight (kDa)

5.96

Isoelectric Point (pI)

45.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BCDHK_Adom3 PF10436 29 - 189 7.1e-56 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
HATPase_c PF02518 233 - 358 2.7e-15 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 244
AccB7I CCANNNNNTGG 2 cut(s) 463, 869
AccII CGCG 1 cut(s) 279
AciI CCGC 4 cut(s) 5, 469, 852, 994
AclWI GGATC 4 cut(s) 282, 447, 665, 678
AcoI YGGCCR 1 cut(s) 508
AcsI RAATTY 4 cut(s) 133, 492, 736, 882
AfaI GTAC 2 cut(s) 98, 252
AfiI CCNNNNNNNGG 2 cut(s) 463, 869
AflIII ACRYGT 1 cut(s) 477
AgsI TTSAA 4 cut(s) 247, 398, 406, 821
AjnI CCWGG 1 cut(s) 185
AluBI AGCT 2 cut(s) 39, 202
AluI AGCT 2 cut(s) 39, 202
Alw21I GWGCWC 2 cut(s) 204, 649
Alw26I GTCTC 6 cut(s) 200, 249, 352, 582, 844, 1080
Alw44I GTGCAC 1 cut(s) 645
AlwI GGATC 4 cut(s) 282, 447, 665, 678
AlwNI CAGNNNCTG 1 cut(s) 157
Ama87I CYCGRG 1 cut(s) 203
AoxI GGCC 2 cut(s) 147, 508
ApaLI GTGCAC 1 cut(s) 645
ApeKI GCWGC 1 cut(s) 908
ApoI RAATTY 4 cut(s) 133, 492, 736, 882
AspS9I GGNCC 2 cut(s) 148, 466
AsuHPI GGTGA 4 cut(s) 19, 97, 367, 446
AvaI CYCGRG 1 cut(s) 203
AvaII GGWCC 1 cut(s) 466
BaeGI GKGCMC 1 cut(s) 649
BamHI GGATCC 1 cut(s) 670
BanII GRGCYC 1 cut(s) 204
Bbv12I GWGCWC 2 cut(s) 204, 649
BbvI GCAGC 1 cut(s) 920
BccI CCATC 4 cut(s) 54, 97, 376, 806
BcgI CGANNNNNNTGC 4 cut(s) 218, 252, 487, 521
BciT130I CCWGG 1 cut(s) 187
BciVI GTATCC 1 cut(s) 1040
BclI TGATCA 1 cut(s) 339
BcoDI GTCTC 6 cut(s) 200, 249, 352, 582, 844, 1080
BfaI CTAG 1 cut(s) 1005
BfmI CTRYAG 1 cut(s) 906
BfuAI ACCTGC 1 cut(s) 244
BfuI GTATCC 1 cut(s) 1040
BglI GCCNNNNNGGC 1 cut(s) 191
BglII AGATCT 2 cut(s) 934, 1021
BisI GCNGC 2 cut(s) 909, 994
BlsI GCNGC 2 cut(s) 910, 995
Bme1390I CCNGG 1 cut(s) 187
Bme18I GGWCC 1 cut(s) 466
BmeT110I CYCGRG 1 cut(s) 203
BmgT120I GGNCC 2 cut(s) 148, 466
BmiI GGNNCC 3 cut(s) 120, 672, 1098
BmrFI CCNGG 1 cut(s) 187
BmrI ACTGGG 1 cut(s) 145
BmsI GCATC 2 cut(s) 601, 1048
BmuI ACTGGG 1 cut(s) 145
BplI GAGNNNNNCTC 2 cut(s) 14, 46
BpmI CTGGAG 1 cut(s) 605
BsaI GGTCTC 1 cut(s) 844
BsaXI ACNNNNNCTCC 4 cut(s) 98, 110, 128, 140
Bsc4I CCNNNNNNNGG 2 cut(s) 463, 869
Bse1I ACTGG 4 cut(s) 151, 263, 588, 603
BseBI CCWGG 1 cut(s) 187
BseGI GGATG 3 cut(s) 313, 616, 928
BseLI CCNNNNNNNGG 2 cut(s) 463, 869
BseMII CTCAG 2 cut(s) 275, 855
BseNI ACTGG 4 cut(s) 151, 263, 588, 603
BseRI GAGGAG 2 cut(s) 534, 1032
BseSI GKGCMC 1 cut(s) 649
BseXI GCAGC 1 cut(s) 920
BsgI GTGCAG 1 cut(s) 74
Bsh1236I CGCG 1 cut(s) 279
BshFI GGCC 2 cut(s) 149, 510
BsiHKAI GWGCWC 2 cut(s) 204, 649
BsiHKCI CYCGRG 1 cut(s) 203
BslFI GGGAC 2 cut(s) 955, 1066
BslI CCNNNNNNNGG 2 cut(s) 463, 869
BsmAI GTCTC 6 cut(s) 200, 249, 352, 582, 844, 1080
BsmFI GGGAC 2 cut(s) 955, 1066
BsnI GGCC 2 cut(s) 149, 510
Bso31I GGTCTC 1 cut(s) 844
BsoBI CYCGRG 1 cut(s) 203
Bsp1286I GDGCHC 2 cut(s) 204, 649
Bsp143I GATC 9 cut(s) 287, 339, 348, 439, 504, 670, 831, 934, 1021
Bsp68I TCGCGA 1 cut(s) 279
BspACI CCGC 4 cut(s) 5, 469, 852, 994
BspANI GGCC 2 cut(s) 149, 510
BspCNI CTCAG 2 cut(s) 276, 854
BspFNI CGCG 1 cut(s) 279
BspHI TCATGA 1 cut(s) 631
BspLI GGNNCC 3 cut(s) 120, 672, 1098
BspMAI CTGCAG 1 cut(s) 910
BspMI ACCTGC 1 cut(s) 244
BspPI GGATC 4 cut(s) 282, 447, 665, 678
BspQI GCTCTTC 1 cut(s) 29
BspTNI GGTCTC 1 cut(s) 844
BsrI ACTGG 4 cut(s) 151, 263, 588, 603
BssMI GATC 9 cut(s) 287, 339, 348, 439, 504, 670, 831, 934, 1021
Bst2UI CCWGG 1 cut(s) 187
Bst4CI ACNGT 1 cut(s) 402
Bst6I CTCTTC 1 cut(s) 29
BstAPI GCANNNNNTGC 1 cut(s) 599
BstC8I GCNNGC 5 cut(s) 19, 500, 512, 616, 747
BstDEI CTNAG 2 cut(s) 284, 841
BstF5I GGATG 3 cut(s) 313, 616, 928
BstFNI CGCG 1 cut(s) 279
BstKTI GATC 9 cut(s) 290, 342, 351, 442, 507, 673, 834, 937, 1024
BstMAI GTCTC 6 cut(s) 200, 249, 352, 582, 844, 1080
BstMBI GATC 9 cut(s) 287, 339, 348, 439, 504, 670, 831, 934, 1021
BstMWI GCNNNNNNNGC 3 cut(s) 191, 599, 624
BstNI CCWGG 1 cut(s) 187
BstNSI RCATGY 3 cut(s) 481, 502, 518
BstSCI CCNGG 1 cut(s) 185
BstSFI CTRYAG 1 cut(s) 906
BstSLI GKGCMC 1 cut(s) 649
BstUI CGCG 1 cut(s) 279
BstV1I GCAGC 1 cut(s) 920
BstX2I RGATCY 5 cut(s) 287, 439, 670, 934, 1021
BstYI RGATCY 5 cut(s) 287, 439, 670, 934, 1021
BsuI GTATCC 1 cut(s) 1040
BsuRI GGCC 2 cut(s) 149, 510
BtsCI GGATG 3 cut(s) 313, 616, 928
BtsI GCAGTG 2 cut(s) 649, 903
BtsIMutI CAGTG 4 cut(s) 581, 610, 649, 903
BtuMI TCGCGA 1 cut(s) 279
BveI ACCTGC 1 cut(s) 244
Cac8I GCNNGC 5 cut(s) 19, 500, 512, 616, 747
CaiI CAGNNNCTG 1 cut(s) 157
CciI TCATGA 1 cut(s) 631
Cfr13I GGNCC 2 cut(s) 148, 466
Csp6I GTAC 2 cut(s) 97, 251
CviAII CATG 8 cut(s) 100, 379, 478, 499, 515, 632, 917, 1107
CviQI GTAC 2 cut(s) 97, 251
DdeI CTNAG 2 cut(s) 284, 841
DpnI GATC 9 cut(s) 289, 341, 350, 441, 506, 672, 833, 936, 1023
DpnII GATC 9 cut(s) 287, 339, 348, 439, 504, 670, 831, 934, 1021
EaeI YGGCCR 1 cut(s) 508
Eam1104I CTCTTC 1 cut(s) 29
EarI CTCTTC 1 cut(s) 29
Ecl136II GAGCTC 1 cut(s) 202
Eco24I GRGCYC 1 cut(s) 204
Eco31I GGTCTC 1 cut(s) 844
Eco47I GGWCC 1 cut(s) 466
Eco53kI GAGCTC 1 cut(s) 202
Eco88I CYCGRG 1 cut(s) 203
EcoICRI GAGCTC 1 cut(s) 202
EcoRI GAATTC 2 cut(s) 492, 736
EcoRII CCWGG 1 cut(s) 185
EcoT22I ATGCAT 1 cut(s) 1063
EcoT38I GRGCYC 1 cut(s) 204
FaeI CATG 8 cut(s) 103, 382, 481, 502, 518, 635, 920, 1110
FaqI GGGAC 2 cut(s) 955, 1066
FatI CATG 8 cut(s) 99, 378, 477, 498, 514, 631, 916, 1106
FauNDI CATATG 1 cut(s) 691
FbaI TGATCA 1 cut(s) 339
Fnu4HI GCNGC 2 cut(s) 909, 994
FokI GGATG 3 cut(s) 320, 623, 935
FriOI GRGCYC 1 cut(s) 204
Fsp4HI GCNGC 2 cut(s) 909, 994
FspBI CTAG 1 cut(s) 1005
GluI GCNGC 2 cut(s) 909, 994
GsuI CTGGAG 1 cut(s) 605
HaeIII GGCC 2 cut(s) 149, 510
Hin1II CATG 8 cut(s) 103, 382, 481, 502, 518, 635, 920, 1110
HincII GTYRAC 1 cut(s) 658
HindII GTYRAC 1 cut(s) 658
HinfI GANTC 8 cut(s) 23, 208, 269, 451, 770, 873, 950, 1088
HphI GGTGA 4 cut(s) 19, 97, 367, 446
Hpy166II GTNNAC 3 cut(s) 647, 658, 872
Hpy188I TCNGA 4 cut(s) 118, 229, 775, 844
Hpy8I GTNNAC 3 cut(s) 647, 658, 872
Hpy99I CGWCG 1 cut(s) 127
HpyAV CCTTC 6 cut(s) 7, 37, 241, 316, 694, 1037
HpyCH4III ACNGT 1 cut(s) 402
HpyCH4IV ACGT 2 cut(s) 125, 654
HpyCH4V TGCA 8 cut(s) 55, 160, 526, 647, 785, 908, 1027, 1061
HpyF10VI GCNNNNNNNGC 3 cut(s) 191, 599, 624
HpyF3I CTNAG 2 cut(s) 284, 841
HpySE526I ACGT 2 cut(s) 125, 654
Hsp92II CATG 8 cut(s) 103, 382, 481, 502, 518, 635, 920, 1110
Ksp22I TGATCA 1 cut(s) 339
Kzo9I GATC 9 cut(s) 287, 339, 348, 439, 504, 670, 831, 934, 1021
LguI GCTCTTC 1 cut(s) 29
LmnI GCTCC 2 cut(s) 118, 1096
Lsp1109I GCAGC 1 cut(s) 920
LweI GCATC 2 cut(s) 601, 1048
MaeI CTAG 1 cut(s) 1005
MaeII ACGT 2 cut(s) 125, 654
MaeIII GTNAC 3 cut(s) 557, 826, 955
MalI GATC 9 cut(s) 289, 341, 350, 441, 506, 672, 833, 936, 1023
MboI GATC 9 cut(s) 287, 339, 348, 439, 504, 670, 831, 934, 1021
MboII GAAGA 4 cut(s) 22, 46, 418, 833
MflI RGATCY 5 cut(s) 287, 439, 670, 934, 1021
MhlI GDGCHC 2 cut(s) 204, 649
MluCI AATT 8 cut(s) 133, 458, 486, 492, 736, 798, 816, 882
MlyI GAGTC 4 cut(s) 32, 202, 764, 867
MmeI TCCRAC 1 cut(s) 96
Mph1103I ATGCAT 1 cut(s) 1063
MseI TTAA 1 cut(s) 732
MslI CAYNNNNRTG 3 cut(s) 366, 636, 921
MspR9I CCNGG 1 cut(s) 187
MvaI CCWGG 1 cut(s) 187
MvnI CGCG 1 cut(s) 279
MwoI GCNNNNNNNGC 3 cut(s) 191, 599, 624
NdeI CATATG 1 cut(s) 691
NdeII GATC 9 cut(s) 287, 339, 348, 439, 504, 670, 831, 934, 1021
NlaIII CATG 8 cut(s) 103, 382, 481, 502, 518, 635, 920, 1110
NlaIV GGNNCC 3 cut(s) 120, 672, 1098
NruI TCGCGA 1 cut(s) 279
NsiI ATGCAT 1 cut(s) 1063
NspI RCATGY 3 cut(s) 481, 502, 518
PaeI GCATGC 1 cut(s) 502
PaeR7I CTCGAG 1 cut(s) 203
PagI TCATGA 1 cut(s) 631
PciI ACATGT 1 cut(s) 477
PciSI GCTCTTC 1 cut(s) 29
PcsI WCGNNNNNNNCGW 1 cut(s) 122
PfeI GAWTC 4 cut(s) 269, 451, 950, 1088
PflMI CCANNNNNTGG 2 cut(s) 463, 869
PkrI GCNGC 2 cut(s) 910, 995
PleI GAGTC 4 cut(s) 31, 202, 764, 867
PpsI GAGTC 4 cut(s) 31, 202, 764, 867
PscI ACATGT 1 cut(s) 477
Psp124BI GAGCTC 1 cut(s) 204
Psp6I CCWGG 1 cut(s) 185
PspGI CCWGG 1 cut(s) 185
PspN4I GGNNCC 3 cut(s) 120, 672, 1098
PspPI GGNCC 2 cut(s) 148, 466
PstI CTGCAG 1 cut(s) 910
PstNI CAGNNNCTG 1 cut(s) 157
PsuI RGATCY 5 cut(s) 287, 439, 670, 934, 1021
RruI TCGCGA 1 cut(s) 279
RsaI GTAC 2 cut(s) 98, 252
RsaNI GTAC 2 cut(s) 97, 251
RseI CAYNNNNRTG 3 cut(s) 366, 636, 921
SacI GAGCTC 1 cut(s) 204
SapI GCTCTTC 1 cut(s) 29
SaqAI TTAA 1 cut(s) 732
SatI GCNGC 2 cut(s) 909, 994
Sau3AI GATC 9 cut(s) 287, 339, 348, 439, 504, 670, 831, 934, 1021
Sau96I GGNCC 2 cut(s) 148, 466
SchI GAGTC 4 cut(s) 32, 202, 764, 867
ScrFI CCNGG 1 cut(s) 187
SduI GDGCHC 2 cut(s) 204, 649
SfaNI GCATC 2 cut(s) 601, 1048
SfcI CTRYAG 1 cut(s) 906
Sfr274I CTCGAG 1 cut(s) 203
SinI GGWCC 1 cut(s) 466
SlaI CTCGAG 1 cut(s) 203
SmiMI CAYNNNNRTG 3 cut(s) 366, 636, 921
SmlI CTYRAG 1 cut(s) 203
SmoI CTYRAG 1 cut(s) 203
SphI GCATGC 1 cut(s) 502
Sse9I AATT 8 cut(s) 133, 458, 486, 492, 736, 798, 816, 882
SsiI CCGC 4 cut(s) 5, 469, 852, 994
SspMI CTAG 1 cut(s) 1005
SstI GAGCTC 1 cut(s) 204
StyD4I CCNGG 1 cut(s) 185
TaaI ACNGT 1 cut(s) 402
TaiI ACGT 2 cut(s) 128, 657
TaqI TCGA 4 cut(s) 32, 204, 482, 620
TasI AATT 8 cut(s) 133, 458, 486, 492, 736, 798, 816, 882
TauI GCSGC 1 cut(s) 996
TfiI GAWTC 4 cut(s) 269, 451, 950, 1088
Tru1I TTAA 1 cut(s) 732
Tru9I TTAA 1 cut(s) 732
TscAI CASTG 4 cut(s) 588, 610, 649, 910
TseI GCWGC 1 cut(s) 908
TspDTI ATGAA 4 cut(s) 86, 261, 324, 620
TspRI CASTG 4 cut(s) 588, 610, 649, 910
Van91I CCANNNNNTGG 2 cut(s) 463, 869
VneI GTGCAC 1 cut(s) 645
VpaK11BI GGWCC 1 cut(s) 466
XapI RAATTY 4 cut(s) 133, 492, 736, 882
XceI RCATGY 3 cut(s) 481, 502, 518
XhoI CTCGAG 1 cut(s) 203
XspI CTAG 1 cut(s) 1005
Zsp2I ATGCAT 1 cut(s) 1063
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.