FvH4_4g08190

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
7994595 .. 7996534
1940 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g08190.t1

Sequence Viewer

Length: 1050 bp
ATGCCCCCTAGCTATATGAAGAAGCTGAAAGGAGATGGTCTCCCAAGATCGGTAGGTGCAAAATGGGCAAAGTTGCGAAAGCTGGCAAACCATGCCTACCATGGAGAGAGCTTAAAGAGTATGATTCCAGCAATGATAGCTAGTACTGAAACAATGCTAGAAAGGTGGGGAAATCATGAAGGCAAAGAGATTGATGTGTGTGAAGAATTTAAGTTGCTAACATCAGAAGTGATTTCGAGGACAACATTTGGCAGTAGCTACTTAGAAGGATTAAGCATTTTTGAGAAGTCAATGAAGTTATTTTCCTTTATATTCAAGATGCCATTCAAACTCAGGCTCCCTGGCATCAGTAAGATTTTCAAAACTAGCGATGAGGTTGGATCAGAGAAGCTTGAAAAAGAAATATGTGATACCCTACTAGCTATTGTTAAGAAACGAGAAAAGAAGGCAATGACAACTGGAGGAGAAGGAAACAACTTTGGGAGTGACTTTCTAGGACTTCTGTTAAAGACTTGTCATGATTCGAGTGACAAAAACAGGATTTCACTCGAGGATTTGGTGAACGAGTGCAAGACATTTTACTTTGCCGGACAAGAAATCCTAGATGTTCTTACTTGGACTATCTTCCTTCTTGCACTCCATACAGATTGGCAACAGAAAGCCAGAAAGGAGGTCCTAGAAATATTTGACAAACAAGCTCCAAATCCTAATAGCATTTTCAAGCTAAAAACTATGAGTATGATCATCAACGAGTCTCTAAGACTATATCCTCCCATTGTTTCCATAGTAAGGAAAGCTGACAATGAAGTTAGACTAGGAAACCTCATTGTCCCTGCTGATGTTGAATTGCTCATCCCAAACCTAGCATTCCATCATGAGCCACAATATTGGGGGCGAGATGTACACCTATTCAAACCGGAGCGATTCTCAGAAGGGGTTGCCAGAGCTACAATAACAGCAGAACCGCATTCTTACCCTTTGGAATGGGACCTCGAACGTGTGTGGGCTTCGACTTTGCGACAACGGAAGCAAAAATTGTTCTGTCAATGA

Protein Analysis

350

Amino Acids

39.99

Weight (kDa)

8.76

Isoelectric Point (pI)

31.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 10 - 312 2.1e-42 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 965
AclWI GGATC 1 cut(s) 388
AcsI RAATTY 1 cut(s) 206
AfaI GTAC 2 cut(s) 145, 903
AfiI CCNNNNNNNGG 2 cut(s) 49, 789
AflIII ACRYGT 1 cut(s) 997
AgsI TTSAA 7 cut(s) 316, 328, 361, 395, 721, 845, 913
AjnI CCWGG 1 cut(s) 340
Alw26I GTCTC 2 cut(s) 44, 759
AlwI GGATC 1 cut(s) 388
Ama87I CYCGRG 1 cut(s) 548
ApoI RAATTY 1 cut(s) 206
AspS9I GGNCC 2 cut(s) 673, 988
AsuHPI GGTGA 1 cut(s) 571
AvaI CYCGRG 1 cut(s) 548
AvaII GGWCC 2 cut(s) 673, 988
BccI CCATC 2 cut(s) 29, 879
BciT130I CCWGG 1 cut(s) 342
BclI TGATCA 1 cut(s) 741
BcoDI GTCTC 2 cut(s) 44, 759
BmcAI AGTACT 1 cut(s) 145
Bme1390I CCNGG 1 cut(s) 342
Bme18I GGWCC 2 cut(s) 673, 988
BmeT110I CYCGRG 1 cut(s) 548
BmgT120I GGNCC 2 cut(s) 673, 988
BmiI GGNNCC 2 cut(s) 338, 989
BmrFI CCNGG 1 cut(s) 342
BmsI GCATC 2 cut(s) 309, 354
BplI GAGNNNNNCTC 4 cut(s) 24, 56, 911, 943
BpmI CTGGAG 1 cut(s) 480
BsaI GGTCTC 1 cut(s) 44
BsaJI CCNNGG 2 cut(s) 100, 340
BsaWI WCCGGW 1 cut(s) 916
BsaXI ACNNNNNCTCC 2 cut(s) 321, 351
Bsc4I CCNNNNNNNGG 2 cut(s) 49, 789
Bse1I ACTGG 1 cut(s) 463
Bse3DI GCAATG 2 cut(s) 138, 456
BseBI CCWGG 1 cut(s) 342
BseDI CCNNGG 2 cut(s) 100, 340
BseGI GGATG 1 cut(s) 852
BseLI CCNNNNNNNGG 2 cut(s) 49, 789
BseMI GCAATG 2 cut(s) 138, 456
BseMII CTCAG 2 cut(s) 346, 942
BseNI ACTGG 1 cut(s) 463
BseRI GAGGAG 1 cut(s) 477
BsiHKCI CYCGRG 1 cut(s) 548
BsiSI CCGG 2 cut(s) 588, 917
BslFI GGGAC 2 cut(s) 815, 1001
BslI CCNNNNNNNGG 2 cut(s) 49, 789
BsmAI GTCTC 2 cut(s) 44, 759
BsmFI GGGAC 2 cut(s) 815, 1001
BsmI GAATGC 2 cut(s) 866, 967
Bso31I GGTCTC 1 cut(s) 44
BsoBI CYCGRG 1 cut(s) 548
Bsp1407I TGTACA 1 cut(s) 901
Bsp143I GATC 3 cut(s) 47, 380, 741
Bsp19I CCATGG 1 cut(s) 100
BspACI CCGC 1 cut(s) 965
BspCNI CTCAG 2 cut(s) 345, 941
BspHI TCATGA 3 cut(s) 175, 517, 874
BspLI GGNNCC 2 cut(s) 338, 989
BspPI GGATC 1 cut(s) 388
BspTNI GGTCTC 1 cut(s) 44
BsrDI GCAATG 2 cut(s) 138, 456
BsrGI TGTACA 1 cut(s) 901
BsrI ACTGG 1 cut(s) 463
BssECI CCNNGG 2 cut(s) 100, 340
BssMI GATC 3 cut(s) 47, 380, 741
BssT1I CCWWGG 1 cut(s) 100
Bst2UI CCWGG 1 cut(s) 342
BstAPI GCANNNNNTGC 1 cut(s) 92
BstAUI TGTACA 1 cut(s) 901
BstC8I GCNNGC 1 cut(s) 84
BstDEI CTNAG 4 cut(s) 262, 332, 758, 928
BstDSI CCRYGG 1 cut(s) 100
BstF5I GGATG 1 cut(s) 852
BstKTI GATC 3 cut(s) 50, 383, 744
BstMAI GTCTC 2 cut(s) 44, 759
BstMBI GATC 3 cut(s) 47, 380, 741
BstMWI GCNNNNNNNGC 3 cut(s) 65, 92, 137
BstNI CCWGG 1 cut(s) 342
BstSCI CCNGG 1 cut(s) 340
BstXI CCANNNNNNTGG 1 cut(s) 888
BtgI CCRYGG 1 cut(s) 100
BtgZI GCGATG 1 cut(s) 384
BtsCI GGATG 1 cut(s) 852
Cac8I GCNNGC 1 cut(s) 84
CciI TCATGA 3 cut(s) 175, 517, 874
Cfr13I GGNCC 2 cut(s) 673, 988
Csp6I GTAC 2 cut(s) 144, 902
CviAII CATG 5 cut(s) 92, 101, 176, 518, 875
CviQI GTAC 2 cut(s) 144, 902
DdeI CTNAG 4 cut(s) 262, 332, 758, 928
DpnI GATC 3 cut(s) 49, 382, 743
DpnII GATC 3 cut(s) 47, 380, 741
Eco130I CCWWGG 1 cut(s) 100
Eco31I GGTCTC 1 cut(s) 44
Eco47I GGWCC 2 cut(s) 673, 988
Eco88I CYCGRG 1 cut(s) 548
EcoO109I RGGNCCY 2 cut(s) 673, 988
EcoRII CCWGG 1 cut(s) 340
EcoT14I CCWWGG 1 cut(s) 100
ErhI CCWWGG 1 cut(s) 100
FaeI CATG 5 cut(s) 95, 104, 179, 521, 878
FaqI GGGAC 2 cut(s) 815, 1001
FatI CATG 5 cut(s) 91, 100, 175, 517, 874
FbaI TGATCA 1 cut(s) 741
FokI GGATG 1 cut(s) 839
GsuI CTGGAG 1 cut(s) 480
HapII CCGG 2 cut(s) 588, 917
Hin1II CATG 5 cut(s) 95, 104, 179, 521, 878
HindIII AAGCTT 1 cut(s) 389
HinfI GANTC 4 cut(s) 124, 521, 752, 924
HpaII CCGG 2 cut(s) 588, 917
HphI GGTGA 1 cut(s) 571
Hpy166II GTNNAC 2 cut(s) 562, 904
Hpy188I TCNGA 3 cut(s) 226, 385, 931
Hpy188III TCNNGA 4 cut(s) 176, 316, 518, 875
Hpy8I GTNNAC 2 cut(s) 562, 904
HpyAV CCTTC 6 cut(s) 173, 260, 439, 461, 638, 926
HpyCH4IV ACGT 1 cut(s) 997
HpyCH4V TGCA 3 cut(s) 59, 570, 635
HpyF10VI GCNNNNNNNGC 3 cut(s) 65, 92, 137
HpyF3I CTNAG 4 cut(s) 262, 332, 758, 928
HpySE526I ACGT 1 cut(s) 997
Hsp92II CATG 5 cut(s) 95, 104, 179, 521, 878
Ksp22I TGATCA 1 cut(s) 741
Kzo9I GATC 3 cut(s) 47, 380, 741
LmnI GCTCC 3 cut(s) 342, 703, 919
LweI GCATC 2 cut(s) 309, 354
MaeII ACGT 1 cut(s) 997
MaeIII GTNAC 2 cut(s) 485, 527
MalI GATC 3 cut(s) 49, 382, 743
MboI GATC 3 cut(s) 47, 380, 741
MboII GAAGA 3 cut(s) 31, 215, 616
MluCI AATT 3 cut(s) 206, 845, 1034
MlyI GAGTC 1 cut(s) 761
MmeI TCCRAC 1 cut(s) 358
MnlI CCTC 8 cut(s) 231, 367, 455, 544, 664, 780, 833, 1001
MseI TTAA 5 cut(s) 113, 210, 272, 429, 506
MspI CCGG 2 cut(s) 588, 917
MspR9I CCNGG 1 cut(s) 342
Mva1269I GAATGC 2 cut(s) 866, 967
MvaI CCWGG 1 cut(s) 342
MwoI GCNNNNNNNGC 3 cut(s) 65, 92, 137
NcoI CCATGG 1 cut(s) 100
NdeII GATC 3 cut(s) 47, 380, 741
NlaIII CATG 5 cut(s) 95, 104, 179, 521, 878
NlaIV GGNNCC 2 cut(s) 338, 989
NmuCI GTSAC 2 cut(s) 485, 527
PaeR7I CTCGAG 1 cut(s) 548
PagI TCATGA 3 cut(s) 175, 517, 874
PctI GAATGC 2 cut(s) 866, 967
PfeI GAWTC 3 cut(s) 124, 521, 924
PleI GAGTC 1 cut(s) 760
PpsI GAGTC 1 cut(s) 760
PpuMI RGGWCCY 2 cut(s) 673, 988
Psp5II RGGWCCY 2 cut(s) 673, 988
Psp6I CCWGG 1 cut(s) 340
PspGI CCWGG 1 cut(s) 340
PspN4I GGNNCC 2 cut(s) 338, 989
PspPI GGNCC 2 cut(s) 673, 988
PspPPI RGGWCCY 2 cut(s) 673, 988
PspXI VCTCGAGB 1 cut(s) 548
RsaI GTAC 2 cut(s) 145, 903
RsaNI GTAC 2 cut(s) 144, 902
SaqAI TTAA 5 cut(s) 113, 210, 272, 429, 506
Sau3AI GATC 3 cut(s) 47, 380, 741
Sau96I GGNCC 2 cut(s) 673, 988
ScaI AGTACT 1 cut(s) 145
SchI GAGTC 1 cut(s) 761
ScrFI CCNGG 1 cut(s) 342
SfaNI GCATC 2 cut(s) 309, 354
Sfr274I CTCGAG 1 cut(s) 548
SinI GGWCC 2 cut(s) 673, 988
SlaI CTCGAG 1 cut(s) 548
SmlI CTYRAG 1 cut(s) 548
SmoI CTYRAG 1 cut(s) 548
Sse9I AATT 3 cut(s) 206, 845, 1034
SsiI CCGC 1 cut(s) 965
SspI AATATT 2 cut(s) 684, 887
StyD4I CCNGG 1 cut(s) 340
StyI CCWWGG 1 cut(s) 100
TaiI ACGT 1 cut(s) 1000
TaqI TCGA 5 cut(s) 236, 524, 549, 993, 1010
TasI AATT 3 cut(s) 206, 845, 1034
TatI WGTACW 2 cut(s) 143, 901
TfiI GAWTC 3 cut(s) 124, 521, 924
Tru1I TTAA 5 cut(s) 113, 210, 272, 429, 506
Tru9I TTAA 5 cut(s) 113, 210, 272, 429, 506
TseFI GTSAC 2 cut(s) 485, 527
Tsp45I GTSAC 2 cut(s) 485, 527
TspDTI ATGAA 4 cut(s) 32, 192, 308, 819
TspGWI ACGGA 1 cut(s) 1039
VpaK11BI GGWCC 2 cut(s) 673, 988
XapI RAATTY 1 cut(s) 206
XcmI CCANNNNNNNNNTGG 1 cut(s) 98
XhoI CTCGAG 1 cut(s) 548
ZrmI AGTACT 1 cut(s) 145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.