pycom13g05220

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
3480920 .. 3481718
799 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g05220.3

Sequence Viewer

Length: 678 bp
ATGAGCTCTTCTCCCTATATACCAAAAAGAAAAGGACAAGAAACCACTAATACTTTGCTTGCTTGGACAATCTTTCTTCTCGCGCACCATACAGATTGGCAAGAGGAAGCAAGAAAGGAGGTGATGGAACTATTCGGCAAACAAACTCCAAATCCTGATGGCATTGCCAAACTGAAAAAGGTAAGAAAGACAACAACTCAGTTAATTGCTTGTTTATATGTCAGAAATATGTTCTCAATTAAGATTCGATATCCTGATTTTATTATCTATTTTTCGGGTTCATATTCCCCTGTTGTTGGTTTTGTGAGGAAAGTTAAAAGGGAAGTTAAACTTGGAAAGCTCATTGTTCCTGCTAATTTTGAATTGTTTGTCCCAAATCTAGCACTTCACCGTGATCCTCAAATCTGGGGAGAAGACGCGCATCTTTTCAAACCGGAGAGATTCTCAGAAGGGGTTGCTAAAGCAACTAACAATAACGTTGGCGCTTTCATACCCTTTGGAATAGGACCTCGAAGTTGTTTGGGATTGAACTTTGCAAATACTGAAGTAAAGATTGTTCTGTCCATGATTCTACAACGCTACTCCTTCACACTGTCCCAAGGTTACGTGCACTTGCCCTATCCCTATGTGACGATTCACCCACAACTTGGAGTTCAGGTAATGCTACACCCACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

226

Amino Acids

25.64

Weight (kDa)

9.7

Isoelectric Point (pI)

28.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 647
AccII CGCG 2 cut(s) 83, 419
AclI AACGTT 1 cut(s) 477
AclWI GGATC 1 cut(s) 389
AcuI CTGAAG 1 cut(s) 564
AfiI CCNNNNNNNGG 2 cut(s) 296, 647
AgsI TTSAA 3 cut(s) 362, 430, 529
AjuI GAANNNNNNNTTGG 2 cut(s) 315, 347
AluBI AGCT 2 cut(s) 6, 340
AluI AGCT 2 cut(s) 6, 340
Alw21I GWGCWC 2 cut(s) 8, 612
Alw44I GTGCAC 1 cut(s) 608
AlwI GGATC 1 cut(s) 389
ApaLI GTGCAC 1 cut(s) 608
AspLEI GCGC 3 cut(s) 85, 421, 485
AspS9I GGNCC 1 cut(s) 506
AsuHPI GGTGA 3 cut(s) 133, 380, 629
AvaII GGWCC 1 cut(s) 506
BaeGI GKGCMC 1 cut(s) 612
BanII GRGCYC 1 cut(s) 8
BbsI GAAGAC 1 cut(s) 420
Bbv12I GWGCWC 2 cut(s) 8, 612
BccI CCATC 2 cut(s) 118, 152
BfaI CTAG 1 cut(s) 380
BfoI RGCGCY 1 cut(s) 486
Bme18I GGWCC 1 cut(s) 506
BmgT120I GGNCC 1 cut(s) 506
BmsI GCATC 1 cut(s) 430
BpiI GAAGAC 1 cut(s) 420
BplI GAGNNNNNCTC 3 cut(s) 27, 428, 460
BsaAI YACGTR 1 cut(s) 607
BsaJI CCNNGG 1 cut(s) 598
BsaWI WCCGGW 1 cut(s) 433
BsaXI ACNNNNNCTCC 2 cut(s) 642, 672
Bsc4I CCNNNNNNNGG 2 cut(s) 296, 647
Bse3DI GCAATG 1 cut(s) 162
BseDI CCNNGG 1 cut(s) 598
BseLI CCNNNNNNNGG 2 cut(s) 296, 647
BseMI GCAATG 1 cut(s) 162
BseMII CTCAG 2 cut(s) 212, 459
BseSI GKGCMC 1 cut(s) 612
Bsh1236I CGCG 2 cut(s) 83, 419
BsiHKAI GWGCWC 2 cut(s) 8, 612
BsiSI CCGG 1 cut(s) 434
BslFI GGGAC 2 cut(s) 356, 580
BslI CCNNNNNNNGG 2 cut(s) 296, 647
BsmFI GGGAC 2 cut(s) 356, 580
Bsp1286I GDGCHC 2 cut(s) 8, 612
Bsp143I GATC 1 cut(s) 394
BspCNI CTCAG 2 cut(s) 211, 458
BspFNI CGCG 2 cut(s) 83, 419
BspPI GGATC 1 cut(s) 389
BspQI GCTCTTC 1 cut(s) 13
BsrDI GCAATG 1 cut(s) 162
BssECI CCNNGG 1 cut(s) 598
BssMI GATC 1 cut(s) 394
BssT1I CCWWGG 1 cut(s) 598
Bst4CI ACNGT 2 cut(s) 392, 594
Bst6I CTCTTC 1 cut(s) 13
BstBAI YACGTR 1 cut(s) 607
BstC8I GCNNGC 1 cut(s) 60
BstDEI CTNAG 2 cut(s) 198, 445
BstFNI CGCG 2 cut(s) 83, 419
BstH2I RGCGCY 1 cut(s) 486
BstHHI GCGC 3 cut(s) 85, 421, 485
BstKTI GATC 1 cut(s) 397
BstMBI GATC 1 cut(s) 394
BstSLI GKGCMC 1 cut(s) 612
BstUI CGCG 2 cut(s) 83, 419
BstV2I GAAGAC 1 cut(s) 420
BtsIMutI CAGTG 1 cut(s) 590
Cac8I GCNNGC 1 cut(s) 60
CfoI GCGC 3 cut(s) 85, 421, 485
Cfr13I GGNCC 1 cut(s) 506
CseI GACGC 1 cut(s) 425
CviAII CATG 1 cut(s) 565
CviJI RGCY 2 cut(s) 6, 340
CviKI_1 RGCY 2 cut(s) 6, 340
DdeI CTNAG 2 cut(s) 198, 445
DpnI GATC 1 cut(s) 396
DpnII GATC 1 cut(s) 394
Eam1104I CTCTTC 1 cut(s) 13
EarI CTCTTC 1 cut(s) 13
Ecl136II GAGCTC 1 cut(s) 6
Eco130I CCWWGG 1 cut(s) 598
Eco24I GRGCYC 1 cut(s) 8
Eco32I GATATC 1 cut(s) 251
Eco47I GGWCC 1 cut(s) 506
Eco53kI GAGCTC 1 cut(s) 6
Eco57I CTGAAG 1 cut(s) 564
EcoICRI GAGCTC 1 cut(s) 6
EcoO109I RGGNCCY 1 cut(s) 506
EcoRV GATATC 1 cut(s) 251
EcoT14I CCWWGG 1 cut(s) 598
EcoT38I GRGCYC 1 cut(s) 8
ErhI CCWWGG 1 cut(s) 598
FaeI CATG 1 cut(s) 568
FalI AAGNNNNNCTT 2 cut(s) 315, 347
FaqI GGGAC 2 cut(s) 356, 580
FatI CATG 1 cut(s) 564
FriOI GRGCYC 1 cut(s) 8
FspBI CTAG 1 cut(s) 380
GlaI GCGC 3 cut(s) 84, 420, 484
HaeII RGCGCY 1 cut(s) 486
HapII CCGG 1 cut(s) 434
HgaI GACGC 1 cut(s) 425
HhaI GCGC 3 cut(s) 85, 421, 485
Hin1II CATG 1 cut(s) 568
Hin6I GCGC 3 cut(s) 83, 419, 483
HinP1I GCGC 3 cut(s) 83, 419, 483
HinfI GANTC 4 cut(s) 244, 441, 568, 634
HpaII CCGG 1 cut(s) 434
HphI GGTGA 3 cut(s) 133, 380, 629
Hpy166II GTNNAC 1 cut(s) 610
Hpy188I TCNGA 2 cut(s) 224, 448
Hpy188III TCNNGA 2 cut(s) 155, 254
Hpy8I GTNNAC 1 cut(s) 610
HpyAV CCTTC 2 cut(s) 443, 595
HpyCH4III ACNGT 2 cut(s) 392, 594
HpyCH4IV ACGT 2 cut(s) 477, 606
HpyCH4V TGCA 2 cut(s) 536, 610
HpyF3I CTNAG 2 cut(s) 198, 445
HpySE526I ACGT 2 cut(s) 477, 606
Hsp92II CATG 1 cut(s) 568
HspAI GCGC 3 cut(s) 83, 419, 483
Kzo9I GATC 1 cut(s) 394
LguI GCTCTTC 1 cut(s) 13
LpnPI CCDG 7 cut(s) 168, 267, 303, 363, 391, 447, 641
LweI GCATC 1 cut(s) 430
MaeI CTAG 1 cut(s) 380
MaeII ACGT 2 cut(s) 477, 606
MaeIII GTNAC 2 cut(s) 602, 628
MalI GATC 1 cut(s) 396
MboI GATC 1 cut(s) 394
MboII GAAGA 2 cut(s) 68, 425
MhlI GDGCHC 2 cut(s) 8, 612
MluCI AATT 4 cut(s) 204, 237, 355, 362
MnlI CCTC 5 cut(s) 97, 112, 300, 408, 519
MseI TTAA 4 cut(s) 203, 240, 315, 327
MspI CCGG 1 cut(s) 434
MvnI CGCG 2 cut(s) 83, 419
NdeII GATC 1 cut(s) 394
NlaIII CATG 1 cut(s) 568
NmuCI GTSAC 1 cut(s) 628
PciSI GCTCTTC 1 cut(s) 13
PfeI GAWTC 4 cut(s) 244, 441, 568, 634
PflMI CCANNNNNTGG 1 cut(s) 647
Ppu21I YACGTR 1 cut(s) 607
PpuMI RGGWCCY 1 cut(s) 506
Psp124BI GAGCTC 1 cut(s) 8
Psp1406I AACGTT 1 cut(s) 477
Psp5II RGGWCCY 1 cut(s) 506
PspPI GGNCC 1 cut(s) 506
PspPPI RGGWCCY 1 cut(s) 506
PsrI GAACNNNNNNTAC 2 cut(s) 540, 572
SacI GAGCTC 1 cut(s) 8
SapI GCTCTTC 1 cut(s) 13
SaqAI TTAA 4 cut(s) 203, 240, 315, 327
Sau3AI GATC 1 cut(s) 394
Sau96I GGNCC 1 cut(s) 506
SduI GDGCHC 2 cut(s) 8, 612
SetI ASST 9 cut(s) 8, 123, 183, 342, 480, 511, 604, 609, 660
SfaNI GCATC 1 cut(s) 430
SinI GGWCC 1 cut(s) 506
Sse9I AATT 4 cut(s) 204, 237, 355, 362
SspMI CTAG 1 cut(s) 380
SstI GAGCTC 1 cut(s) 8
StyI CCWWGG 1 cut(s) 598
TaaI ACNGT 2 cut(s) 392, 594
TaiI ACGT 2 cut(s) 480, 609
TaqI TCGA 2 cut(s) 247, 511
TasI AATT 4 cut(s) 204, 237, 355, 362
TfiI GAWTC 4 cut(s) 244, 441, 568, 634
Tru1I TTAA 4 cut(s) 203, 240, 315, 327
Tru9I TTAA 4 cut(s) 203, 240, 315, 327
TscAI CASTG 1 cut(s) 597
TseFI GTSAC 1 cut(s) 628
Tsp45I GTSAC 1 cut(s) 628
TspDTI ATGAA 2 cut(s) 270, 478
TspRI CASTG 1 cut(s) 597
Van91I CCANNNNNTGG 1 cut(s) 647
VneI GTGCAC 1 cut(s) 608
VpaK11BI GGWCC 1 cut(s) 506
XspI CTAG 1 cut(s) 380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.