Rmu_sc0011080.1_g000003

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011080.1
Physical Location & Seq
Forward (+)
12978 .. 20806
7829 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011080.1_g000003.1.cds

Sequence Viewer

Length: 2037 bp
atggcgatgaagtcgtcagggaggagggtttttctgaagtcgtcggcgaggttggcctgggtatcgatctcatcgagcatgcagagaaggatgactccgccgcaaagtttggcttctgaggggggctcggtcgaagtgctttctttaccgttggattgtcatgaaagtaacagaggccaatgggttagccggtcatcaactctggacagttccttcaaatcacctccccattcggcggggaagaattatctacaatggtatggtcttcaaccagttttggtcattacagaacctgagttaggtaaggagatactcaataacaaagatagggtttatagaaaacaaaagcccagtatctatgtgaagaagctattcggagacggcatttccatggcagaaggtgaaaaatggtcaaaactaagaaagatttccaaccatgccttccatggagacagcttaaaaagtatgattccagacatgatagctagtgctgagacgatgctcgaagggtggaaaaagcatgaaggaaaagagattgaggctcgccatgccaccaatgacaagcagagaatttcagtgaatgaattggtcgaggagtgcaagacattttactttgcgggacaagaaacgaataactctttgcttgtttggactgtctttcttctgcccctccatccggaatggcaagaggaagcaagaaaggaggtcctgcagttatttggcaaaaaaactccaaatcctgatggccttgccaaactaaaaacaatgagtataatcatcaatgagtctctgaggctatatcctcctgcctttgcccttgtacgaatagtggataaggaagttaaattgggaaacctcattatacctgataatgttgaattgcttgtctcaattctagcacttcatcatgaacctcagttctggggacaagatgtgaaacatttcaaacctaagagattctctgaaggtgttgctagtgctactaacaacaacatggctgcattcttaccgtttggaatgggacctagaacttgtgttggcctcaactttgccaccattgaagcaaagattgctctttcaatgattctactgttgaaggaaaatcagttttgtgtgtctaatcaaactaggagtagtaataggagagaatgttctagaattcctagttctattcagattagatttccttgtaacattagaacattcccaatctcttcaagagccgactgtcagtgccaccaaaccaacccggcgaccgtacttccagccctagtctccccaggagccgactgccagtaccactgccaccgagactatctcgaccagcgaagcaagggcgagaagtccttttccaaaaggcaagaaaagaaccttgtgacgaggttggtgctctcctcgtccacatcgtttgatcaagaagtcaggtcaagggactccccgacgactgcaccccatggtgctggcacgcctgcacaatcacatcagcaaaagagacagtttgctacccatactggtttttggagccaaacagattctttaaaaacggaatcgtggggattcacgctatacgaactaacagtgttcgtgagcatcgaaatattacgtactaagagtgttcgtaagcttcgggctaagagcgtccgtcgtgatatgatgatccgaatattaaagacttcacacggacatccatttttcagaacgaaaagaagtaaaaatcatattttggacaccgaaagagcctctgcgccgttcacgcccaaaaccggccatccttggtcggcaccaccgtccccctgtggccttagggtggccaccaatgctctttctagtccaaattttgattctaaagtcaattgtgacttcgtggctcaaccaaaatcctcattggttgtttctaaagcccatcattctttctgcaaagcctgctctttagcaaaattaggatcgagaccattctatgcaaaggacaataaagaaaatataccattcttacaaagaattcaaggtgatatttgtggacctattcaaccaccatga

Protein Analysis

678

Amino Acids

76.21

Weight (kDa)

9.67

Isoelectric Point (pI)

52.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1780
AccIII TCCGGA 1 cut(s) 676
AciI CCGC 4 cut(s) 98, 101, 236, 617
AclWI GGATC 2 cut(s) 1651, 1951
AcoI YGGCCR 2 cut(s) 1765, 1809
AcsI RAATTY 4 cut(s) 570, 1158, 1834, 1998
AcuI CTGAAG 2 cut(s) 56, 984
AfaI GTAC 4 cut(s) 822, 1260, 1298, 1606
AfiI CCNNNNNNNGG 5 cut(s) 235, 299, 676, 1763, 1807
AjnI CCWGG 2 cut(s) 56, 1279
AjuI GAANNNNNNNTTGG 4 cut(s) 425, 457, 1825, 1857
AloI GAACNNNNNNTCC 2 cut(s) 1135, 1167
AluBI AGCT 4 cut(s) 370, 456, 485, 1624
AluI AGCT 4 cut(s) 370, 456, 485, 1624
Alw21I GWGCWC 1 cut(s) 1392
Alw26I GTCTC 9 cut(s) 372, 444, 488, 792, 892, 1279, 1305, 1486, 1942
AlwI GGATC 2 cut(s) 1651, 1951
AlwNI CAGNNNCTG 1 cut(s) 293
Aor13HI TCCGGA 1 cut(s) 676
AoxI GGCC 7 cut(s) 54, 175, 745, 1039, 1765, 1798, 1809
ApeKI GCWGC 1 cut(s) 998
ApoI RAATTY 4 cut(s) 570, 1158, 1834, 1998
Asp700I GAANNNNTTC 3 cut(s) 371, 427, 941
AspLEI GCGC 1 cut(s) 1747
AspS9I GGNCC 3 cut(s) 706, 1022, 2018
AsuC2I CCSGG 1 cut(s) 1250
AsuHPI GGTGA 3 cut(s) 213, 413, 2018
AvaII GGWCC 3 cut(s) 706, 1022, 2018
AxyI CCTNAGG 1 cut(s) 1802
BalI TGGCCA 1 cut(s) 1811
BanI GGYRCC 1 cut(s) 1780
BanII GRGCYC 1 cut(s) 128
BbsI GAAGAC 1 cut(s) 257
Bbv12I GWGCWC 1 cut(s) 1392
BbvI GCAGC 1 cut(s) 985
BccI CCATC 4 cut(s) 681, 737, 1776, 1911
BceAI ACGGC 2 cut(s) 397, 1732
BcgI CGANNNNNNTGC 2 cut(s) 1369, 1403
BciT130I CCWGG 2 cut(s) 58, 1281
BclI TGATCA 1 cut(s) 1411
BcnI CCSGG 1 cut(s) 1250
BcoDI GTCTC 9 cut(s) 372, 444, 488, 792, 892, 1279, 1305, 1486, 1942
BfaI CTAG 9 cut(s) 486, 896, 975, 1026, 1128, 1155, 1164, 1271, 1827
BfmI CTRYAG 1 cut(s) 710
BisI GCNGC 2 cut(s) 101, 999
BlsI GCNGC 2 cut(s) 102, 1000
Bme1390I CCNGG 3 cut(s) 58, 1250, 1281
Bme18I GGWCC 3 cut(s) 706, 1022, 2018
BmgT120I GGNCC 3 cut(s) 706, 1022, 2018
BmiI GGNNCC 4 cut(s) 1023, 1285, 1523, 1782
BmrFI CCNGG 3 cut(s) 58, 1250, 1281
BmrI ACTGGG 1 cut(s) 345
BmsI GCATC 2 cut(s) 489, 1599
BmuI ACTGGG 1 cut(s) 345
BpiI GAAGAC 1 cut(s) 257
BplI GAGNNNNNCTC 4 cut(s) 110, 142, 1302, 1334
BpuMI CCSGG 1 cut(s) 1250
Bsa29I ATCGAT 1 cut(s) 65
BsaAI YACGTR 1 cut(s) 1604
BsaI GGTCTC 1 cut(s) 1942
BsaJI CCNNGG 6 cut(s) 57, 390, 445, 1279, 1453, 1772
BsaWI WCCGGW 1 cut(s) 676
BsaXI ACNNNNNCTCC 2 cut(s) 1135, 1165
Bsc4I CCNNNNNNNGG 5 cut(s) 235, 299, 676, 1763, 1807
Bse118I RCCGGY 2 cut(s) 189, 1763
Bse1I ACTGG 4 cut(s) 272, 351, 1294, 1516
Bse21I CCTNAGG 1 cut(s) 1802
BseAI TCCGGA 1 cut(s) 676
BseBI CCWGG 2 cut(s) 58, 1281
BseCI ATCGAT 1 cut(s) 65
BseDI CCNNGG 6 cut(s) 57, 390, 445, 1279, 1453, 1772
BseGI GGATG 4 cut(s) 96, 673, 1684, 1768
BseLI CCNNNNNNNGG 5 cut(s) 235, 299, 676, 1763, 1807
BseMII CTCAG 5 cut(s) 108, 285, 483, 782, 929
BseNI ACTGG 4 cut(s) 272, 351, 1294, 1516
BseRI GAGGAG 3 cut(s) 37, 608, 1384
BseXI GCAGC 1 cut(s) 985
BsgI GTGCAG 2 cut(s) 1431, 1455
Bsh1285I CGRYCG 2 cut(s) 132, 1257
BshFI GGCC 7 cut(s) 56, 177, 747, 1041, 1767, 1800, 1811
BshNI GGYRCC 1 cut(s) 1780
BshVI ATCGAT 1 cut(s) 65
BsiEI CGRYCG 2 cut(s) 132, 1257
BsiHKAI GWGCWC 1 cut(s) 1392
BsiSI CCGG 4 cut(s) 190, 677, 1250, 1764
BslFI GGGAC 5 cut(s) 633, 939, 1035, 1445, 1774
BslI CCNNNNNNNGG 5 cut(s) 235, 299, 676, 1763, 1807
BsmAI GTCTC 9 cut(s) 372, 444, 488, 792, 892, 1279, 1305, 1486, 1942
BsmBI CGTCTC 2 cut(s) 372, 488
BsmFI GGGAC 5 cut(s) 633, 939, 1035, 1445, 1774
BsmI GAATGC 1 cut(s) 1001
BsnI GGCC 7 cut(s) 56, 177, 747, 1041, 1767, 1800, 1811
Bso31I GGTCTC 1 cut(s) 1942
Bsp1286I GDGCHC 2 cut(s) 128, 1392
Bsp13I TCCGGA 1 cut(s) 676
Bsp143I GATC 4 cut(s) 66, 1411, 1656, 1943
Bsp19I CCATGG 3 cut(s) 390, 445, 1453
BspACI CCGC 4 cut(s) 98, 101, 236, 617
BspANI GGCC 7 cut(s) 56, 177, 747, 1041, 1767, 1800, 1811
BspCNI CTCAG 5 cut(s) 109, 286, 484, 783, 928
BspDI ATCGAT 1 cut(s) 65
BspEI TCCGGA 1 cut(s) 676
BspHI TCATGA 2 cut(s) 160, 907
BspLI GGNNCC 4 cut(s) 1023, 1285, 1523, 1782
BspMAI CTGCAG 1 cut(s) 714
BspPI GGATC 2 cut(s) 1651, 1951
BspT107I GGYRCC 1 cut(s) 1780
BspTNI GGTCTC 1 cut(s) 1942
BsrFI RCCGGY 2 cut(s) 189, 1763
BsrI ACTGG 4 cut(s) 272, 351, 1294, 1516
BssAI RCCGGY 2 cut(s) 189, 1763
BssECI CCNNGG 6 cut(s) 57, 390, 445, 1279, 1453, 1772
BssMI GATC 4 cut(s) 66, 1411, 1656, 1943
BssT1I CCWWGG 4 cut(s) 390, 445, 1453, 1772
Bst2UI CCWGG 2 cut(s) 58, 1281
Bst6I CTCTTC 1 cut(s) 1219
BstAPI GCANNNNNTGC 2 cut(s) 1070, 1923
BstBAI YACGTR 1 cut(s) 1604
BstC8I GCNNGC 6 cut(s) 80, 544, 1462, 1466, 1470, 1924
BstDSI CCRYGG 3 cut(s) 390, 445, 1453
BstENI CCTNNNNNAGG 1 cut(s) 297
BstF5I GGATG 4 cut(s) 96, 673, 1684, 1768
BstHHI GCGC 1 cut(s) 1747
BstKTI GATC 4 cut(s) 69, 1414, 1659, 1946
BstMAI GTCTC 9 cut(s) 372, 444, 488, 792, 892, 1279, 1305, 1486, 1942
BstMBI GATC 4 cut(s) 66, 1411, 1656, 1943
BstMCI CGRYCG 2 cut(s) 132, 1257
BstMWI GCNNNNNNNGC 6 cut(s) 53, 548, 1070, 1753, 1817, 1923
BstNI CCWGG 2 cut(s) 58, 1281
BstNSI RCATGY 1 cut(s) 82
BstSCI CCNGG 3 cut(s) 56, 1248, 1279
BstSFI CTRYAG 1 cut(s) 710
BstSNI TACGTA 1 cut(s) 1604
BstV1I GCAGC 1 cut(s) 985
BstV2I GAAGAC 1 cut(s) 257
BstXI CCANNNNNNTGG 1 cut(s) 1460
Bsu15I ATCGAT 1 cut(s) 65
Bsu36I CCTNAGG 1 cut(s) 1802
BsuRI GGCC 7 cut(s) 56, 177, 747, 1041, 1767, 1800, 1811
BsuTUI ATCGAT 1 cut(s) 65
BtgI CCRYGG 3 cut(s) 390, 445, 1453
BtgZI GCGATG 1 cut(s) 20
BtsCI GGATG 4 cut(s) 96, 673, 1684, 1768
BtsI GCAGTG 1 cut(s) 1300
BtsIMutI CAGTG 4 cut(s) 582, 1238, 1300, 1584
Cac8I GCNNGC 6 cut(s) 80, 544, 1462, 1466, 1470, 1924
CaiI CAGNNNCTG 1 cut(s) 293
CciI TCATGA 2 cut(s) 160, 907
CfoI GCGC 1 cut(s) 1747
Cfr10I RCCGGY 2 cut(s) 189, 1763
Cfr13I GGNCC 3 cut(s) 706, 1022, 2018
ClaI ATCGAT 1 cut(s) 65
CseI GACGC 1 cut(s) 1627
Csp6I GTAC 4 cut(s) 821, 1259, 1297, 1605
CspCI CAANNNNNGTGG 2 cut(s) 1390, 1425
CviQI GTAC 4 cut(s) 821, 1259, 1297, 1605
DpnI GATC 4 cut(s) 68, 1413, 1658, 1945
DpnII GATC 4 cut(s) 66, 1411, 1656, 1943
DraI TTTAAA 1 cut(s) 1539
EaeI YGGCCR 2 cut(s) 1765, 1809
Eam1104I CTCTTC 1 cut(s) 1219
EarI CTCTTC 1 cut(s) 1219
EciI GGCGGA 1 cut(s) 87
Eco105I TACGTA 1 cut(s) 1604
Eco130I CCWWGG 4 cut(s) 390, 445, 1453, 1772
Eco24I GRGCYC 1 cut(s) 128
Eco31I GGTCTC 1 cut(s) 1942
Eco47I GGWCC 3 cut(s) 706, 1022, 2018
Eco57I CTGAAG 2 cut(s) 56, 984
Eco81I CCTNAGG 1 cut(s) 1802
EcoNI CCTNNNNNAGG 1 cut(s) 297
EcoO109I RGGNCCY 2 cut(s) 706, 1022
EcoRI GAATTC 2 cut(s) 1158, 1998
EcoRII CCWGG 2 cut(s) 56, 1279
EcoT14I CCWWGG 4 cut(s) 390, 445, 1453, 1772
EcoT38I GRGCYC 1 cut(s) 128
ErhI CCWWGG 4 cut(s) 390, 445, 1453, 1772
Esp3I CGTCTC 2 cut(s) 372, 488
FalI AAGNNNNNCTT 2 cut(s) 97, 129
FaqI GGGAC 5 cut(s) 633, 939, 1035, 1445, 1774
FauI CCCGC 2 cut(s) 229, 610
FbaI TGATCA 1 cut(s) 1411
Fnu4HI GCNGC 2 cut(s) 101, 999
FokI GGATG 4 cut(s) 103, 660, 1671, 1755
FriOI GRGCYC 1 cut(s) 128
Fsp4HI GCNGC 2 cut(s) 101, 999
FspBI CTAG 9 cut(s) 486, 896, 975, 1026, 1128, 1155, 1164, 1271, 1827
GlaI GCGC 1 cut(s) 1746
GluI GCNGC 2 cut(s) 101, 999
HaeIII GGCC 7 cut(s) 56, 177, 747, 1041, 1767, 1800, 1811
HapII CCGG 4 cut(s) 190, 677, 1250, 1764
HgaI GACGC 1 cut(s) 1627
HhaI GCGC 1 cut(s) 1747
Hin6I GCGC 1 cut(s) 1745
HinP1I GCGC 1 cut(s) 1745
HindIII AAGCTT 1 cut(s) 1622
HpaII CCGG 4 cut(s) 190, 677, 1250, 1764
HphI GGTGA 3 cut(s) 213, 413, 2018
Hpy166II GTNNAC 3 cut(s) 1401, 1752, 2018
Hpy188I TCNGA 8 cut(s) 36, 118, 377, 792, 964, 1176, 1661, 1697
Hpy8I GTNNAC 3 cut(s) 1401, 1752, 2018
Hpy99I CGWCG 3 cut(s) 46, 1444, 1647
HpyAV CCTTC 8 cut(s) 81, 223, 392, 451, 500, 518, 959, 1090
HpyCH4IV ACGT 1 cut(s) 1603
HpyCH4V TGCA 8 cut(s) 82, 600, 712, 1001, 1448, 1472, 1917, 1961
HpyF10VI GCNNNNNNNGC 6 cut(s) 53, 548, 1070, 1753, 1817, 1923
HpySE526I ACGT 1 cut(s) 1603
HspAI GCGC 1 cut(s) 1745
Kpn2I TCCGGA 1 cut(s) 676
Ksp22I TGATCA 1 cut(s) 1411
Kzo9I GATC 4 cut(s) 66, 1411, 1656, 1943
LmnI GCTCC 2 cut(s) 1283, 1521
Lsp1109I GCAGC 1 cut(s) 985
LweI GCATC 2 cut(s) 489, 1599
MaeI CTAG 9 cut(s) 486, 896, 975, 1026, 1128, 1155, 1164, 1271, 1827
MaeII ACGT 1 cut(s) 1603
MaeIII GTNAC 4 cut(s) 167, 1190, 1375, 1856
MalI GATC 4 cut(s) 68, 1413, 1658, 1945
MboI GATC 4 cut(s) 66, 1411, 1656, 1943
MboII GAAGA 5 cut(s) 253, 257, 376, 653, 1206
MfeI CAATTG 1 cut(s) 1852
MhlI GDGCHC 2 cut(s) 128, 1392
MlsI TGGCCA 1 cut(s) 1811
MluNI TGGCCA 1 cut(s) 1811
MlyI GAGTC 3 cut(s) 88, 794, 1427
MmeI TCCRAC 2 cut(s) 132, 456
Mox20I TGGCCA 1 cut(s) 1811
MroI TCCGGA 1 cut(s) 676
MroXI GAANNNNTTC 3 cut(s) 371, 427, 941
MscI TGGCCA 1 cut(s) 1811
MseI TTAA 4 cut(s) 458, 843, 1538, 1667
MslI CAYNNNNRTG 1 cut(s) 389
Msp20I TGGCCA 1 cut(s) 1811
MspI CCGG 4 cut(s) 190, 677, 1250, 1764
MspR9I CCNGG 3 cut(s) 58, 1250, 1281
MunI CAATTG 1 cut(s) 1852
Mva1269I GAATGC 1 cut(s) 1001
MvaI CCWGG 2 cut(s) 58, 1281
MwoI GCNNNNNNNGC 6 cut(s) 53, 548, 1070, 1753, 1817, 1923
NciI CCSGG 1 cut(s) 1250
NcoI CCATGG 3 cut(s) 390, 445, 1453
NdeII GATC 4 cut(s) 66, 1411, 1656, 1943
NlaIV GGNNCC 4 cut(s) 1023, 1285, 1523, 1782
NmuCI GTSAC 2 cut(s) 1375, 1856
NspI RCATGY 1 cut(s) 82
PaeI GCATGC 1 cut(s) 82
PagI TCATGA 2 cut(s) 160, 907
PcsI WCGNNNNNNNCGW 4 cut(s) 71, 1403, 1590, 1784
PctI GAATGC 1 cut(s) 1001
PdmI GAANNNNTTC 3 cut(s) 371, 427, 941
PfeI GAWTC 7 cut(s) 469, 957, 1084, 1532, 1547, 1557, 1841
PkrI GCNGC 2 cut(s) 102, 1000
PleI GAGTC 3 cut(s) 88, 793, 1427
PpsI GAGTC 3 cut(s) 88, 793, 1427
Ppu21I YACGTR 1 cut(s) 1604
PpuMI RGGWCCY 2 cut(s) 706, 1022
Psp5II RGGWCCY 2 cut(s) 706, 1022
Psp6I CCWGG 2 cut(s) 56, 1279
PspGI CCWGG 2 cut(s) 56, 1279
PspN4I GGNNCC 4 cut(s) 1023, 1285, 1523, 1782
PspPI GGNCC 3 cut(s) 706, 1022, 2018
PspPPI RGGWCCY 2 cut(s) 706, 1022
PstI CTGCAG 1 cut(s) 714
PstNI CAGNNNCTG 1 cut(s) 293
RsaI GTAC 4 cut(s) 822, 1260, 1298, 1606
RsaNI GTAC 4 cut(s) 821, 1259, 1297, 1605
RseI CAYNNNNRTG 1 cut(s) 389
SaqAI TTAA 4 cut(s) 458, 843, 1538, 1667
SatI GCNGC 2 cut(s) 101, 999
Sau3AI GATC 4 cut(s) 66, 1411, 1656, 1943
Sau96I GGNCC 3 cut(s) 706, 1022, 2018
SchI GAGTC 3 cut(s) 88, 794, 1427
ScrFI CCNGG 3 cut(s) 58, 1250, 1281
SduI GDGCHC 2 cut(s) 128, 1392
SfaNI GCATC 2 cut(s) 489, 1599
SfcI CTRYAG 1 cut(s) 710
SinI GGWCC 3 cut(s) 706, 1022, 2018
SmiMI CAYNNNNRTG 1 cut(s) 389
SnaBI TACGTA 1 cut(s) 1604
SphI GCATGC 1 cut(s) 82
SsiI CCGC 4 cut(s) 98, 101, 236, 617
SspI AATATT 2 cut(s) 1599, 1665
SspMI CTAG 9 cut(s) 486, 896, 975, 1026, 1128, 1155, 1164, 1271, 1827
StyD4I CCNGG 3 cut(s) 56, 1248, 1279
StyI CCWWGG 4 cut(s) 390, 445, 1453, 1772
TaiI ACGT 1 cut(s) 1606
TaqI TCGA 8 cut(s) 65, 74, 132, 504, 591, 1320, 1593, 1946
TaqII GACCGA 1 cut(s) 118
TauI GCSGC 1 cut(s) 103
TfiI GAWTC 7 cut(s) 469, 957, 1084, 1532, 1547, 1557, 1841
Tru1I TTAA 4 cut(s) 458, 843, 1538, 1667
Tru9I TTAA 4 cut(s) 458, 843, 1538, 1667
TscAI CASTG 4 cut(s) 582, 1238, 1307, 1584
TseFI GTSAC 2 cut(s) 1375, 1856
TseI GCWGC 1 cut(s) 998
Tsp45I GTSAC 2 cut(s) 1375, 1856
TspDTI ATGAA 6 cut(s) 23, 177, 537, 597, 893, 924
TspGWI ACGGA 3 cut(s) 1559, 1631, 1695
TspRI CASTG 4 cut(s) 582, 1238, 1307, 1584
VpaK11BI GGWCC 3 cut(s) 706, 1022, 2018
XagI CCTNNNNNAGG 1 cut(s) 297
XapI RAATTY 4 cut(s) 570, 1158, 1834, 1998
XbaI TCTAGA 1 cut(s) 1154
XceI RCATGY 1 cut(s) 82
XcmI CCANNNNNNNNNTGG 1 cut(s) 443
XmnI GAANNNNTTC 3 cut(s) 371, 427, 941
XspI CTAG 9 cut(s) 486, 896, 975, 1026, 1128, 1155, 1164, 1271, 1827
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.