RLG00000007748

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
20607814 .. 20608958
1145 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007748

Sequence Viewer

Length: 675 bp
ATGAGCAGGCCCATACCGAATTTATCACATGATGTACTATCTGCAGTTCAACCTCACATTCACTCATGGACCAAGAGCTATGGGAAGAATTATCTACAATGGTATGGTCTTCAACCAGTTTTGGTCATTACAGAACCTGAGTTAGGTAAGGAGATACTCAATAACAAAGATAGGGTTTATACAAAACAGAAGCCCAGTATCTATGTGAAGAAACTATTGGGAGACAGCATTTCCATGGCAGAAGGTGAAAAATGGTCAAAACTGAGAAAGATTTCCAACCATGCCTTCCATGGAGACAGCTTAAAAAGTATGATTCCAGACATGATAGCTAGTGCTGAGACGATGCTCGAAGGGTGGAAAAAGCATGAAGGAAAAGAGATTGAGGTGTATGAACATTTTAGGTTGTTCACTTCGGAAGTGATTTCTAGGACAACATTTGGCAGCAGCTATTTAGAAGGGAAGCATATTTTTGACATGTTGACGAACTTAAGCTCTGTAACATTCAAAAATGCTCACAACCTCAGGGTTCCTAGCATCACCAAGTTTTATAAAACCAGTTATGAGAAAGAATTAGCGAAGCTTGAGAAAGAATTAGCGAAGCTTGAGAAAGGAATAGGAGACACCATAATAGAGATTGTTAAGAAAAGAGAGAGGGAGGCAGTGACTGGAGAATAA

Protein Analysis

225

Amino Acids

25.73

Weight (kDa)

9.11

Isoelectric Point (pI)

36.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 20 - 201 1.4e-21 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 549
AcsI RAATTY 1 cut(s) 19
AfaI GTAC 1 cut(s) 36
AfiI CCNNNNNNNGG 1 cut(s) 143
AflII CTTAAG 1 cut(s) 487
AflIII ACRYGT 1 cut(s) 474
AgsI TTSAA 3 cut(s) 50, 113, 505
AjuI GAANNNNNNNTTGG 4 cut(s) 200, 232, 269, 301
AluBI AGCT 7 cut(s) 78, 300, 329, 447, 492, 580, 601
AluI AGCT 7 cut(s) 78, 300, 329, 447, 492, 580, 601
Alw26I GTCTC 4 cut(s) 216, 288, 332, 612
AlwNI CAGNNNCTG 2 cut(s) 137, 665
AoxI GGCC 1 cut(s) 8
ApeKI GCWGC 2 cut(s) 441, 444
ApoI RAATTY 1 cut(s) 19
Asp700I GAANNNNTTC 1 cut(s) 271
AspS9I GGNCC 2 cut(s) 9, 69
AsuHPI GGTGA 2 cut(s) 257, 529
AvaII GGWCC 1 cut(s) 69
AxyI CCTNAGG 1 cut(s) 521
BbsI GAAGAC 1 cut(s) 101
BbvI GCAGC 2 cut(s) 453, 456
BcoDI GTCTC 4 cut(s) 216, 288, 332, 612
BfaI CTAG 3 cut(s) 330, 426, 531
BfmI CTRYAG 1 cut(s) 42
BfrI CTTAAG 1 cut(s) 487
BisI GCNGC 2 cut(s) 442, 445
BlsI GCNGC 2 cut(s) 443, 446
Bme18I GGWCC 1 cut(s) 69
BmgT120I GGNCC 2 cut(s) 9, 69
BmiI GGNNCC 1 cut(s) 528
BmrI ACTGGG 1 cut(s) 189
BmsI GCATC 2 cut(s) 333, 543
BmuI ACTGGG 1 cut(s) 189
BpiI GAAGAC 1 cut(s) 101
BpuEI CTTGAG 2 cut(s) 602, 623
BsaJI CCNNGG 2 cut(s) 234, 289
Bsc4I CCNNNNNNNGG 1 cut(s) 143
Bse1I ACTGG 4 cut(s) 116, 195, 555, 670
Bse21I CCTNAGG 1 cut(s) 521
BseDI CCNNGG 2 cut(s) 234, 289
BseLI CCNNNNNNNGG 1 cut(s) 143
BseMII CTCAG 4 cut(s) 129, 254, 327, 535
BseNI ACTGG 4 cut(s) 116, 195, 555, 670
BseXI GCAGC 2 cut(s) 453, 456
BshFI GGCC 1 cut(s) 10
BslI CCNNNNNNNGG 1 cut(s) 143
BsmAI GTCTC 4 cut(s) 216, 288, 332, 612
BsmBI CGTCTC 1 cut(s) 332
BsnI GGCC 1 cut(s) 10
Bsp19I CCATGG 2 cut(s) 234, 289
BspANI GGCC 1 cut(s) 10
BspCNI CTCAG 4 cut(s) 130, 255, 328, 534
BspLI GGNNCC 1 cut(s) 528
BspMAI CTGCAG 1 cut(s) 46
BspTI CTTAAG 1 cut(s) 487
BsrI ACTGG 4 cut(s) 116, 195, 555, 670
BssECI CCNNGG 2 cut(s) 234, 289
BssT1I CCWWGG 2 cut(s) 234, 289
BstAFI CTTAAG 1 cut(s) 487
BstC8I GCNNGC 1 cut(s) 8
BstDEI CTNAG 4 cut(s) 138, 263, 336, 521
BstDSI CCRYGG 2 cut(s) 234, 289
BstENI CCTNNNNNAGG 1 cut(s) 141
BstMAI GTCTC 4 cut(s) 216, 288, 332, 612
BstNSI RCATGY 1 cut(s) 478
BstSFI CTRYAG 1 cut(s) 42
BstV1I GCAGC 2 cut(s) 453, 456
BstV2I GAAGAC 1 cut(s) 101
Bsu36I CCTNAGG 1 cut(s) 521
BsuRI GGCC 1 cut(s) 10
BtgI CCRYGG 2 cut(s) 234, 289
BtsI GCAGTG 1 cut(s) 666
BtsIMutI CAGTG 1 cut(s) 666
Cac8I GCNNGC 1 cut(s) 8
CaiI CAGNNNCTG 2 cut(s) 137, 665
Cfr13I GGNCC 2 cut(s) 9, 69
Csp6I GTAC 1 cut(s) 35
CviAII CATG 8 cut(s) 29, 66, 235, 281, 290, 322, 365, 475
CviJI RGCY 9 cut(s) 10, 78, 193, 300, 329, 447, 492, 580, 601
CviKI_1 RGCY 9 cut(s) 10, 78, 193, 300, 329, 447, 492, 580, 601
CviQI GTAC 1 cut(s) 35
DdeI CTNAG 4 cut(s) 138, 263, 336, 521
Eco130I CCWWGG 2 cut(s) 234, 289
Eco47I GGWCC 1 cut(s) 69
Eco81I CCTNAGG 1 cut(s) 521
EcoNI CCTNNNNNAGG 1 cut(s) 141
EcoT14I CCWWGG 2 cut(s) 234, 289
ErhI CCWWGG 2 cut(s) 234, 289
Esp3I CGTCTC 1 cut(s) 332
FaeI CATG 8 cut(s) 32, 69, 238, 284, 293, 325, 368, 478
FatI CATG 8 cut(s) 28, 65, 234, 280, 289, 321, 364, 474
Fnu4HI GCNGC 2 cut(s) 442, 445
Fsp4HI GCNGC 2 cut(s) 442, 445
FspBI CTAG 3 cut(s) 330, 426, 531
GluI GCNGC 2 cut(s) 442, 445
HaeIII GGCC 1 cut(s) 10
Hin1II CATG 8 cut(s) 32, 69, 238, 284, 293, 325, 368, 478
HincII GTYRAC 1 cut(s) 480
HindII GTYRAC 1 cut(s) 480
HindIII AAGCTT 2 cut(s) 578, 599
HinfI GANTC 1 cut(s) 313
HphI GGTGA 2 cut(s) 257, 529
Hpy166II GTNNAC 2 cut(s) 408, 480
Hpy188I TCNGA 1 cut(s) 415
Hpy188III TCNNGA 1 cut(s) 317
Hpy8I GTNNAC 2 cut(s) 408, 480
HpyAV CCTTC 5 cut(s) 236, 295, 344, 362, 449
HpyCH4V TGCA 1 cut(s) 44
HpyF3I CTNAG 4 cut(s) 138, 263, 336, 521
Hsp92II CATG 8 cut(s) 32, 69, 238, 284, 293, 325, 368, 478
LpnPI CCDG 7 cut(s) 129, 150, 208, 330, 508, 568, 651
Lsp1109I GCAGC 2 cut(s) 453, 456
LweI GCATC 2 cut(s) 333, 543
MaeI CTAG 3 cut(s) 330, 426, 531
MaeIII GTNAC 2 cut(s) 496, 661
MboII GAAGA 3 cut(s) 97, 101, 220
MluCI AATT 4 cut(s) 19, 88, 569, 590
MmeI TCCRAC 1 cut(s) 300
MnlI CCTC 5 cut(s) 63, 376, 530, 645, 649
MroXI GAANNNNTTC 1 cut(s) 271
MseI TTAA 3 cut(s) 302, 488, 639
MslI CAYNNNNRTG 1 cut(s) 233
MspCI CTTAAG 1 cut(s) 487
NcoI CCATGG 2 cut(s) 234, 289
NlaIII CATG 8 cut(s) 32, 69, 238, 284, 293, 325, 368, 478
NlaIV GGNNCC 1 cut(s) 528
NmuCI GTSAC 1 cut(s) 661
NspI RCATGY 1 cut(s) 478
PciI ACATGT 1 cut(s) 474
PdmI GAANNNNTTC 1 cut(s) 271
PfeI GAWTC 1 cut(s) 313
PkrI GCNGC 2 cut(s) 443, 446
PscI ACATGT 1 cut(s) 474
PsiI TTATAA 1 cut(s) 549
PspN4I GGNNCC 1 cut(s) 528
PspPI GGNCC 2 cut(s) 9, 69
PstI CTGCAG 1 cut(s) 46
PstNI CAGNNNCTG 2 cut(s) 137, 665
RsaI GTAC 1 cut(s) 36
RsaNI GTAC 1 cut(s) 35
RseI CAYNNNNRTG 1 cut(s) 233
SaqAI TTAA 3 cut(s) 302, 488, 639
SatI GCNGC 2 cut(s) 442, 445
Sau96I GGNCC 2 cut(s) 9, 69
SfaNI GCATC 2 cut(s) 333, 543
SfcI CTRYAG 1 cut(s) 42
SinI GGWCC 1 cut(s) 69
SmiMI CAYNNNNRTG 1 cut(s) 233
SmlI CTYRAG 3 cut(s) 487, 581, 602
SmoI CTYRAG 3 cut(s) 487, 581, 602
Sse9I AATT 4 cut(s) 19, 88, 569, 590
SspMI CTAG 3 cut(s) 330, 426, 531
StyI CCWWGG 2 cut(s) 234, 289
TaqI TCGA 1 cut(s) 348
TasI AATT 4 cut(s) 19, 88, 569, 590
TatI WGTACW 1 cut(s) 34
TfiI GAWTC 1 cut(s) 313
Tru1I TTAA 3 cut(s) 302, 488, 639
Tru9I TTAA 3 cut(s) 302, 488, 639
TscAI CASTG 1 cut(s) 666
TseFI GTSAC 1 cut(s) 661
TseI GCWGC 2 cut(s) 441, 444
Tsp45I GTSAC 1 cut(s) 661
TspDTI ATGAA 2 cut(s) 381, 405
TspRI CASTG 1 cut(s) 666
Vha464I CTTAAG 1 cut(s) 487
VpaK11BI GGWCC 1 cut(s) 69
XagI CCTNNNNNAGG 1 cut(s) 141
XapI RAATTY 1 cut(s) 19
XceI RCATGY 1 cut(s) 478
XcmI CCANNNNNNNNNTGG 1 cut(s) 287
XmnI GAANNNNTTC 1 cut(s) 271
XspI CTAG 3 cut(s) 330, 426, 531
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.