pycom16g05000

Cytochrome p450

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
3222890 .. 3223614
725 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g05000.2

Sequence Viewer

Length: 525 bp
ATGACATACTGTCCACAGTTCAACCTCATATTCACTCCTGGACCAAGATATATGTGGTATGTTACCCAAGCTCAACTAGTTATTGGGGAACCTGAGTTGTGCAAAGAGATACTAAATAACAAAGAGCGAGCTTATCCGAAAAGGGAGCCTCCACCTTATGTAAAGAAATTATTGGGAGATGGCCTTGCATCAACTGAAGGTGAAAAATGGGGGAAACTGCGAAAGCTCGCCAACCATGCCTTCCATGGAGATAGCTTAAGAAGTATGATTCCAACGATGACAACTAGTGTTGAGACAATGCTAGAAAGGTGGAAAGATCATGAAGGAAAAGAAATCGAAGTGTTTGAGGAATTTAGGTTGTTGACTTCAGAAGTTGTTTCGAGGACAGCATTTGGTAGCAGCTACTTAGAAGGGAAGAATGTTTTCGAGATGTTGATGAAGTTATTTTTCTTATATTTAAACATAATTTCAAACTCAGGTTTCCTTGCATCAGGTATTTTCCTTTTAACTAAATTCAGCATATAG

Protein Analysis

175

Amino Acids

20.06

Weight (kDa)

7.74

Isoelectric Point (pI)

39.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 350, 512
AcuI CTGAAG 2 cut(s) 216, 351
AflII CTTAAG 1 cut(s) 256
AgsI TTSAA 2 cut(s) 22, 471
AhdI GACNNNNNGTC 1 cut(s) 9
AhlI ACTAGT 2 cut(s) 76, 284
AjnI CCWGG 1 cut(s) 37
AjuI GAANNNNNNNTTGG 2 cut(s) 224, 256
AluBI AGCT 5 cut(s) 71, 131, 226, 255, 402
AluI AGCT 5 cut(s) 71, 131, 226, 255, 402
Alw26I GTCTC 1 cut(s) 287
AoxI GGCC 1 cut(s) 181
ApeKI GCWGC 1 cut(s) 399
ApoI RAATTY 2 cut(s) 350, 512
Asp700I GAANNNNTTC 1 cut(s) 422
AspS9I GGNCC 1 cut(s) 41
AsuHPI GGTGA 1 cut(s) 212
AvaII GGWCC 1 cut(s) 41
BbvI GCAGC 1 cut(s) 411
BccI CCATC 1 cut(s) 173
BciT130I CCWGG 1 cut(s) 39
BcoDI GTCTC 1 cut(s) 287
BcuI ACTAGT 2 cut(s) 76, 284
BfaI CTAG 3 cut(s) 77, 285, 302
BfrI CTTAAG 1 cut(s) 256
BisI GCNGC 1 cut(s) 400
BlsI GCNGC 1 cut(s) 401
Bme1390I CCNGG 1 cut(s) 39
Bme18I GGWCC 1 cut(s) 41
BmeRI GACNNNNNGTC 1 cut(s) 9
BmgT120I GGNCC 1 cut(s) 41
BmiI GGNNCC 2 cut(s) 90, 147
BmrFI CCNGG 1 cut(s) 39
BmsI GCATC 2 cut(s) 197, 497
BsaJI CCNNGG 1 cut(s) 244
BseBI CCWGG 1 cut(s) 39
BseDI CCNNGG 1 cut(s) 244
BseMII CTCAG 2 cut(s) 84, 489
BseXI GCAGC 1 cut(s) 411
BshFI GGCC 1 cut(s) 183
BsmAI GTCTC 1 cut(s) 287
BsnI GGCC 1 cut(s) 183
Bsp143I GATC 1 cut(s) 316
Bsp19I CCATGG 1 cut(s) 244
BspANI GGCC 1 cut(s) 183
BspCNI CTCAG 2 cut(s) 85, 488
BspHI TCATGA 1 cut(s) 319
BspLI GGNNCC 2 cut(s) 90, 147
BspTI CTTAAG 1 cut(s) 256
BssECI CCNNGG 1 cut(s) 244
BssMI GATC 1 cut(s) 316
BssT1I CCWWGG 1 cut(s) 244
Bst2UI CCWGG 1 cut(s) 39
Bst4CI ACNGT 2 cut(s) 11, 18
BstAFI CTTAAG 1 cut(s) 256
BstC8I GCNNGC 2 cut(s) 129, 228
BstDEI CTNAG 3 cut(s) 93, 406, 475
BstDSI CCRYGG 1 cut(s) 244
BstKTI GATC 1 cut(s) 319
BstMAI GTCTC 1 cut(s) 287
BstMBI GATC 1 cut(s) 316
BstMWI GCNNNNNNNGC 1 cut(s) 236
BstNI CCWGG 1 cut(s) 39
BstSCI CCNGG 1 cut(s) 37
BstV1I GCAGC 1 cut(s) 411
BsuRI GGCC 1 cut(s) 183
BtgI CCRYGG 1 cut(s) 244
Cac8I GCNNGC 2 cut(s) 129, 228
CciI TCATGA 1 cut(s) 319
Cfr13I GGNCC 1 cut(s) 41
CviAII CATG 3 cut(s) 236, 245, 320
CviJI RGCY 7 cut(s) 71, 131, 148, 183, 226, 255, 402
CviKI_1 RGCY 7 cut(s) 71, 131, 148, 183, 226, 255, 402
DdeI CTNAG 3 cut(s) 93, 406, 475
DpnI GATC 1 cut(s) 318
DpnII GATC 1 cut(s) 316
DraI TTTAAA 1 cut(s) 459
DriI GACNNNNNGTC 1 cut(s) 9
Eam1105I GACNNNNNGTC 1 cut(s) 9
Eco130I CCWWGG 1 cut(s) 244
Eco47I GGWCC 1 cut(s) 41
Eco57I CTGAAG 2 cut(s) 216, 351
EcoRII CCWGG 1 cut(s) 37
EcoT14I CCWWGG 1 cut(s) 244
ErhI CCWWGG 1 cut(s) 244
FaeI CATG 3 cut(s) 239, 248, 323
FatI CATG 3 cut(s) 235, 244, 319
Fnu4HI GCNGC 1 cut(s) 400
Fsp4HI GCNGC 1 cut(s) 400
FspBI CTAG 3 cut(s) 77, 285, 302
GluI GCNGC 1 cut(s) 400
HaeIII GGCC 1 cut(s) 183
Hin1II CATG 3 cut(s) 239, 248, 323
HincII GTYRAC 1 cut(s) 363
HindII GTYRAC 1 cut(s) 363
HinfI GANTC 1 cut(s) 268
HphI GGTGA 1 cut(s) 212
Hpy166II GTNNAC 2 cut(s) 14, 363
Hpy188I TCNGA 2 cut(s) 138, 370
Hpy188III TCNNGA 2 cut(s) 320, 427
Hpy8I GTNNAC 2 cut(s) 14, 363
HpyAV CCTTC 4 cut(s) 191, 250, 317, 404
HpyCH4III ACNGT 2 cut(s) 11, 18
HpyCH4V TGCA 3 cut(s) 102, 188, 488
HpyF10VI GCNNNNNNNGC 1 cut(s) 236
HpyF3I CTNAG 3 cut(s) 93, 406, 475
Hsp92II CATG 3 cut(s) 239, 248, 323
Kzo9I GATC 1 cut(s) 316
LmnI GCTCC 1 cut(s) 145
LpnPI CCDG 5 cut(s) 24, 51, 105, 462, 477
Lsp1109I GCAGC 1 cut(s) 411
LweI GCATC 2 cut(s) 197, 497
MaeI CTAG 3 cut(s) 77, 285, 302
MaeIII GTNAC 1 cut(s) 61
MalI GATC 1 cut(s) 318
MboI GATC 1 cut(s) 316
MboII GAAGA 1 cut(s) 427
MluCI AATT 4 cut(s) 167, 350, 465, 512
MmeI TCCRAC 1 cut(s) 296
MnlI CCTC 4 cut(s) 35, 159, 340, 375
MroXI GAANNNNTTC 1 cut(s) 422
MseI TTAA 3 cut(s) 257, 458, 506
MspCI CTTAAG 1 cut(s) 256
MspR9I CCNGG 1 cut(s) 39
MvaI CCWGG 1 cut(s) 39
MwoI GCNNNNNNNGC 1 cut(s) 236
NcoI CCATGG 1 cut(s) 244
NdeII GATC 1 cut(s) 316
NlaIII CATG 3 cut(s) 239, 248, 323
NlaIV GGNNCC 2 cut(s) 90, 147
PagI TCATGA 1 cut(s) 319
PdmI GAANNNNTTC 1 cut(s) 422
PfeI GAWTC 1 cut(s) 268
PfoI TCCNGGA 1 cut(s) 37
PkrI GCNGC 1 cut(s) 401
Psp6I CCWGG 1 cut(s) 37
PspGI CCWGG 1 cut(s) 37
PspN4I GGNNCC 2 cut(s) 90, 147
PspPI GGNCC 1 cut(s) 41
SaqAI TTAA 3 cut(s) 257, 458, 506
SatI GCNGC 1 cut(s) 400
Sau3AI GATC 1 cut(s) 316
Sau96I GGNCC 1 cut(s) 41
ScrFI CCNGG 1 cut(s) 39
SfaNI GCATC 2 cut(s) 197, 497
SinI GGWCC 1 cut(s) 41
SmlI CTYRAG 1 cut(s) 256
SmoI CTYRAG 1 cut(s) 256
SpeI ACTAGT 2 cut(s) 76, 284
Sse9I AATT 4 cut(s) 167, 350, 465, 512
SspMI CTAG 3 cut(s) 77, 285, 302
StyD4I CCNGG 1 cut(s) 37
StyI CCWWGG 1 cut(s) 244
TaaI ACNGT 2 cut(s) 11, 18
TaqI TCGA 3 cut(s) 336, 380, 426
TasI AATT 4 cut(s) 167, 350, 465, 512
TfiI GAWTC 1 cut(s) 268
Tru1I TTAA 3 cut(s) 257, 458, 506
Tru9I TTAA 3 cut(s) 257, 458, 506
TseI GCWGC 1 cut(s) 399
TspDTI ATGAA 2 cut(s) 336, 452
Vha464I CTTAAG 1 cut(s) 256
VpaK11BI GGWCC 1 cut(s) 41
XapI RAATTY 2 cut(s) 350, 512
XcmI CCANNNNNNNNNTGG 2 cut(s) 51, 242
XmnI GAANNNNTTC 1 cut(s) 422
XspI CTAG 3 cut(s) 77, 285, 302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.