Rorug04G0301700

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
47700545 .. 47716088
15544 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0301700.1

Sequence Viewer

Length: 3090 bp
ATGGAGGCTTTTGGAGGCAAGCCTCGGAATATGTATGGTCCGGTGGTGCCGGATTTGAAGGCGGTTGGGAAGAAGAGTTTGGAGTGGGATTTGAATGATTGGAAATGGGACGGCCATGTTTTTACTGCCACTCCTTTGAATTCTGTGCCCTCTGATTGTAGGAGTAGGCAGTTGTTTCCGACTGGGCCGGAAACTCCATCCAATGCTGGTTGGTCCAACAGTAGTTCTTCTGGTTCGGATGATATTAGTCCGGGGAATGAGAAAGGTAAAAGAGAATTGGAGAAAAGGAGAAGGGCTGCTGTTGTAGAAAATGAAGAAATAAATGATGAAGCTGGGTCTCTTAATCTCAAGCTTGGTGGGCAGGTTTACCCAATTTTGGAAGAAGATGGAAAGACCGGGAAGAAGACGAAGATTGTTGGGACTACTTCCAACCGCGCGGTTTGTCAGGTGGAGGACTGCAAGGCTGATCTTAGCCATGCCAAGGATTACCACCGACGGCATAAGGTCTGTGATATGCATTCCAAGGCAACCACAGCTATGGTGGGTAATAATTTGCAGCGGTTTTGTCAACAGTGTAGCAGGTTTCATGTTCTTCAAGAGTTTGATGAAGGGAAGAGAAGTTGTCGTAGACGTTTGGCTGGCCATAATAGGAGGAGAAGAAAAACACATCCTGACACTGTTGTTAATGGAGGCTCCATGAATGATGAAAGAGGAAGCAGTTATATATTGATTACTTTGCTAAGAATACTCTCCAATATGCACTCTAATAGTTCTGATCAAACAAAGGATCAGGATCTGCTTTCTCATCTGTTGAAGAACATAGCCAATAATATTGGCACTGTTGATGGAAGGAACATATCTGCATTGCTGCAGGGATCTCAAGGTTTACTTAATGGTGGGTCTTCCGTTCAGACTGCACAGAAGGTGCCAGATATTGGTTTCAATGGCAAGGAACCCAGTAGGCCTTCTGTTTCAACCTCTAAGATGGACGATTGTGTTAATCTTAATGGTCATTTAAGGCCTACAGGACAGTGTCCGACAGGACCTGCATCAGATAAGTTACTGAACAGAATATCTTCAGTTGGTGGTGATCTTGGAAGTCAAGCTCTTTCTGGTGTGCAGGCTACCAAGTCACTTTCCTCAAGAGACAGTCTTCCGTCCAAATCAGTTGCACCGGAATATGGGAGGATCCAGTTAAATGAGATCGATTTAAATAATACATATGACGATTCACAGGAGTGTTTAGAGAACCTAGGGAATTCTCATGTTCCTGTAAATCCAGGGACCGAGTCTCATGGAGGTCCCTTTTGGATACAGCGTGATTCTCAAAAGTCAAGCCCACCTCAGACAAGTGGGAATTCAGACTCAGCTGCTACTCGGTCACCATCAAGTTCTAGTGGAGAAGCTCAGAGTCGCACGGATCGGATTGTCTTCAAACTATTTGGAAAAGACCCGAGTGATCTTCCATTTGGTCTGCGATCACAGGTCCTCGGCTGGTTATCCAGCACTCCTACAGACATTGAAAGCTACATAAGGCCAGGCTGTATAATTTTGACAATTTACCTCCGTCTAGAAAAATCCACGTGGGAGGAGCTCTGCTGTCATCTGGGATCCAGTTTGCAAAGACTTTTAGATGCCGCCAATGATCCTTTCTGGAGAACAGGATGGGTGTATACTAGGATGCAACATTTTGTTGCGTTTATGTACAATGGTCAAGTTGTCTTAGACACAACCTTACCTCTTAAAAGCCAAAAAAGTTGCAGGATATCAAGCATCAAACCAATTGCAGTCTCTTTATCTGAGAGAGCCCAGTTTGTTGTAAAAGGCTTTAACCTTCCTCATTCCACCACGAGGTTACTATGTGCTCTAGAAGGGAAGTATCTGGCGCAAGAAGCTTGTGATGACGTGATGGATGGTGCTGATACAACTGTTGAGCATGATGAGCTACAGTGCATCAGATTCTCCTGCTCTATACCAAATGTTACTGGGCGAGGATTCATTGAGGTTGAAGATCTTGGTCTCAGTAGCAGCTTCTTTCCATTTATAGTTGCAGAGCAGGAAGTGTGTTCAGAGATTTGTATGTTGGAGGATGTGATTGAGGCAGCTGAGACTGTTGATGACATCCAGGCAGATCCTGAAATATTAGAAGCCAAGAACCAGGCTATGGACTTTATACATGAATTGGGTTGGCTTCTTCATAGAAGTCATGTTAAGTTTAGACTTGGTCACCTGGATCCCAACCTAGATCTATTTCCTTTTAGACGGTTCAAATTACTTATGGAGTTTTCTGTGGATCATGACTGGTGTGCTGTAGTGAAGAAACTCTTGAAGCTTCTGTTTGACAGTACTGTTGACACCGGAGAACATCCTTCCGTTCCGCTTGCATTATTGGATATGGCCCTCCTCCACAGAGCTGTTCGAAGAAATTGCAGACCTATGGTAGAACTGTTGTTAAGATTTGTTCCAGATAAAGGTTTAGAATCTGAACAGAAGAAATACGTTGAAGGGGAAGACAACAGTTTCTTATTTAAACCTGATGGTGTTGGTCCCCTGGGGTTGACTCCTCTTCATGTTGCAGCTAGTATTGATGGTTGTGAGCACGTATTGGATGCTTTAACTGATGATCCTGGAAAGGTGGGAATTGAAGCTTGGAAAAATGCTCGAGACAGTACAGGAATGACACCATATGATTATGCATCCATGCAAGGCCGCTACTCCTATATCAATCTTGTTCAGAGGAAAATCAGCAAGAAACTTGAGAGCGGGCATGTGGTTCTTGATATCCCCGGCACTCTGTTAGAGAGCAATAGCAAGCAGAAGCAATCAGATGGGCATAGATCATCAAAAGTAGCTAGCCTTGACACCGAAAAGTTTGAAATAAATGCATTAATACGAAGTGATTGCAAGTTATGTAGCCAGAAACTAGCTTATGGCAGCACAAGGTCACTGGTGTACAGGCCGGCAATGTTGTCGATGGTGGCCATTGCTGCCGTCTGTGTCTGTGTGGCCTTGTTCTTTAAGAGCACACCTGAAGTTGTTTTCATCTTCCACCCCTTCCGGTGGGAGCATTTGAAGTTTGGCTCAAGCTAA

Protein Analysis

1029

Amino Acids

113.83

Weight (kDa)

6.46

Isoelectric Point (pI)

47.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SBP PF03110 148 - 221 8.2e-30 SBP domain
Ig_SPL7 PF26102 583 - 694 1.7e-44 SPL7-like, immunoglobulin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 352, 570, 1054
AccB1I GGYRCC 2 cut(s) 46, 925
AccB7I CCANNNNNTGG 2 cut(s) 935, 2164
AccBSI CCGCTC 1 cut(s) 2763
AccI GTMKAC 2 cut(s) 628, 1673
AccII CGCG 2 cut(s) 435, 437
AciI CCGC 8 cut(s) 62, 433, 437, 559, 1638, 2378, 2710, 2763
AcoI YGGCCR 3 cut(s) 112, 640, 2979
AcsI RAATTY 3 cut(s) 139, 1258, 1357
AcuI CTGAAG 2 cut(s) 1062, 3051
AcvI CACGTG 1 cut(s) 1584
AfaI GTAC 4 cut(s) 1706, 2347, 2671, 2954
AfiI CCNNNNNNNGG 8 cut(s) 376, 481, 935, 1181, 1851, 2164, 2471, 3060
AjiI CACGTC 1 cut(s) 1906
AjnI CCWGG 7 cut(s) 1279, 1537, 2124, 2157, 2229, 2550, 2626
AjuI GAANNNNNNNTTGG 6 cut(s) 62, 94, 1634, 1666, 2632, 2664
AleI CACNNNNGTG 1 cut(s) 1237
Alw21I GWGCWC 4 cut(s) 1596, 1867, 2601, 3026
Alw26I GTCTC 7 cut(s) 342, 1140, 1296, 1795, 2024, 2102, 2658
AlwNI CAGNNNCTG 3 cut(s) 796, 1046, 2135
Ama87I CYCGRG 2 cut(s) 1453, 2661
ApeKI GCWGC 9 cut(s) 296, 556, 868, 1370, 2028, 2102, 2576, 2934, 2987
ApoI RAATTY 3 cut(s) 139, 1258, 1357
AseI ATTAAT 1 cut(s) 2888
Asp700I GAANNNNTTC 1 cut(s) 1075
AspA2I CCTAGG 1 cut(s) 1252
AspLEI GCGC 2 cut(s) 437, 1888
AspS9I GGNCC 9 cut(s) 38, 185, 213, 1043, 1284, 1301, 1486, 2398, 2546
AsuC2I CCSGG 3 cut(s) 252, 397, 2787
AsuHPI GGTGA 3 cut(s) 1100, 1374, 2219
AsuII TTCGAA 1 cut(s) 2419
AsuNHI GCTAGC 1 cut(s) 2852
AvaI CYCGRG 2 cut(s) 1453, 2661
AvaII GGWCC 7 cut(s) 38, 213, 1043, 1284, 1301, 1486, 2546
AvrII CCTAGG 1 cut(s) 1252
BaeGI GKGCMC 1 cut(s) 150
BaeI ACNNNNGTAYC 2 cut(s) 1914, 1947
BalI TGGCCA 2 cut(s) 642, 2981
BamHI GGATCC 3 cut(s) 1188, 1610, 2233
BanI GGYRCC 2 cut(s) 46, 925
BanII GRGCYC 2 cut(s) 1596, 1810
BauI CACGAG 1 cut(s) 1849
BbrPI CACGTG 1 cut(s) 1584
BbsI GAAGAC 5 cut(s) 410, 894, 1145, 1423, 2517
Bbv12I GWGCWC 4 cut(s) 1596, 1867, 2601, 3026
BbvI GCAGC 9 cut(s) 283, 568, 855, 1357, 2040, 2114, 2588, 2946, 2974
BceAI ACGGC 3 cut(s) 127, 512, 2975
BcgI CGANNNNNNTGC 6 cut(s) 2409, 2443, 2883, 2917, 2952, 2986
BciT130I CCWGG 7 cut(s) 1281, 1539, 2126, 2159, 2231, 2552, 2628
BciVI GTATCC 1 cut(s) 1305
BclI TGATCA 1 cut(s) 775
BcnI CCSGG 3 cut(s) 252, 397, 2787
BcoDI GTCTC 7 cut(s) 342, 1140, 1296, 1795, 2024, 2102, 2658
BfaI CTAG 9 cut(s) 1253, 1395, 1571, 1677, 1868, 2243, 2580, 2853, 2924
BfmI CTRYAG 5 cut(s) 869, 1023, 1512, 1946, 2310
BfuAI ACCTGC 3 cut(s) 352, 570, 1054
BfuI GTATCC 1 cut(s) 1305
BglII AGATCT 2 cut(s) 2011, 2245
BlnI CCTAGG 1 cut(s) 1252
BmcAI AGTACT 1 cut(s) 2347
Bme18I GGWCC 7 cut(s) 38, 213, 1043, 1284, 1301, 1486, 2546
BmeT110I CYCGRG 2 cut(s) 1453, 2661
BmgBI CACGTC 1 cut(s) 1906
BmgT120I GGNCC 9 cut(s) 38, 185, 213, 1043, 1284, 1301, 1486, 2398, 2546
BmrI ACTGGG 4 cut(s) 192, 951, 1804, 1995
BmsI GCATC 7 cut(s) 1058, 1624, 1671, 1782, 1962, 2599, 2705
BmtI GCTAGC 1 cut(s) 2856
BmuI ACTGGG 4 cut(s) 192, 951, 1804, 1995
BpiI GAAGAC 5 cut(s) 410, 894, 1145, 1423, 2517
BpmI CTGGAG 1 cut(s) 1675
Bpu14I TTCGAA 1 cut(s) 2419
BpuEI CTTGAG 5 cut(s) 332, 864, 1126, 2777, 3067
BpuMI CCSGG 3 cut(s) 252, 397, 2787
Bsa29I ATCGAT 1 cut(s) 1206
BsaAI YACGTR 2 cut(s) 1584, 2602
BsaBI GATNNNNATC 1 cut(s) 792
BsaI GGTCTC 2 cut(s) 342, 2024
BsaWI WCCGGW 4 cut(s) 40, 1174, 2357, 3057
BsaXI ACNNNNNCTCC 2 cut(s) 115, 145
Bsc4I CCNNNNNNNGG 8 cut(s) 376, 481, 935, 1181, 1851, 2164, 2471, 3060
Bse118I RCCGGY 1 cut(s) 2959
Bse1I ACTGG 8 cut(s) 187, 957, 1192, 1614, 1810, 1990, 2306, 2952
Bse3DI GCAATG 3 cut(s) 863, 2970, 2982
Bse8I GATNNNNATC 1 cut(s) 792
BseBI CCWGG 7 cut(s) 1281, 1539, 2126, 2159, 2231, 2552, 2628
BseCI ATCGAT 1 cut(s) 1206
BseJI GATNNNNATC 1 cut(s) 792
BseLI CCNNNNNNNGG 8 cut(s) 376, 481, 935, 1181, 1851, 2164, 2471, 3060
BseMI GCAATG 3 cut(s) 863, 2970, 2982
BseMII CTCAG 6 cut(s) 1358, 1380, 1421, 1791, 2035, 2097
BseNI ACTGG 8 cut(s) 187, 957, 1192, 1614, 1810, 1990, 2306, 2952
BseRI GAGGAG 4 cut(s) 667, 1604, 2393, 2553
BseSI GKGCMC 1 cut(s) 150
BseXI GCAGC 9 cut(s) 283, 568, 855, 1357, 2040, 2114, 2588, 2946, 2974
BseYI CCCAGC 1 cut(s) 332
BsgI GTGCAG 2 cut(s) 900, 1139
Bsh1236I CGCG 2 cut(s) 435, 437
BshNI GGYRCC 2 cut(s) 46, 925
BshVI ATCGAT 1 cut(s) 1206
BsiHKAI GWGCWC 4 cut(s) 1596, 1867, 2601, 3026
BsiHKCI CYCGRG 2 cut(s) 1453, 2661
BslFI GGGAC 5 cut(s) 122, 433, 1287, 1297, 2532
BslI CCNNNNNNNGG 8 cut(s) 376, 481, 935, 1181, 1851, 2164, 2471, 3060
BsmAI GTCTC 7 cut(s) 342, 1140, 1296, 1795, 2024, 2102, 2658
BsmFI GGGAC 5 cut(s) 122, 433, 1287, 1297, 2532
BsmI GAATGC 1 cut(s) 517
Bso31I GGTCTC 2 cut(s) 342, 2024
BsoBI CYCGRG 2 cut(s) 1453, 2661
Bsp119I TTCGAA 1 cut(s) 2419
Bsp1286I GDGCHC 6 cut(s) 150, 1596, 1810, 1867, 2601, 3026
Bsp1407I TGTACA 2 cut(s) 1704, 2952
BspACI CCGC 8 cut(s) 62, 433, 437, 559, 1638, 2378, 2710, 2763
BspCNI CTCAG 6 cut(s) 1357, 1379, 1420, 1792, 2034, 2098
BspDI ATCGAT 1 cut(s) 1206
BspFNI CGCG 2 cut(s) 435, 437
BspHI TCATGA 1 cut(s) 2296
BspMAI CTGCAG 1 cut(s) 873
BspMI ACCTGC 3 cut(s) 352, 570, 1054
BspOI GCTAGC 1 cut(s) 2856
BspT104I TTCGAA 1 cut(s) 2419
BspT107I GGYRCC 2 cut(s) 46, 925
BspTNI GGTCTC 2 cut(s) 342, 2024
BsrBI CCGCTC 1 cut(s) 2763
BsrDI GCAATG 3 cut(s) 863, 2970, 2982
BsrFI RCCGGY 1 cut(s) 2959
BsrGI TGTACA 2 cut(s) 1704, 2952
BsrI ACTGG 8 cut(s) 187, 957, 1192, 1614, 1810, 1990, 2306, 2952
BssAI RCCGGY 1 cut(s) 2959
BssNAI GTATAC 1 cut(s) 1674
BssSI CACGAG 1 cut(s) 1849
BssT1I CCWWGG 3 cut(s) 480, 522, 1252
Bst1107I GTATAC 1 cut(s) 1674
Bst2BI CACGAG 1 cut(s) 1849
Bst2UI CCWGG 7 cut(s) 1281, 1539, 2126, 2159, 2231, 2552, 2628
Bst6I CTCTTC 3 cut(s) 68, 608, 2571
BstAUI TGTACA 2 cut(s) 1704, 2952
BstBAI YACGTR 2 cut(s) 1584, 2602
BstBI TTCGAA 1 cut(s) 2419
BstC8I GCNNGC 8 cut(s) 20, 640, 1122, 2382, 2765, 2813, 2854, 2961
BstEII GGTNACC 2 cut(s) 1380, 2225
BstFNI CGCG 2 cut(s) 435, 437
BstHHI GCGC 2 cut(s) 437, 1888
BstMAI GTCTC 7 cut(s) 342, 1140, 1296, 1795, 2024, 2102, 2658
BstMWI GCNNNNNNNGC 5 cut(s) 358, 533, 1892, 1942, 2987
BstNI CCWGG 7 cut(s) 1281, 1539, 2126, 2159, 2231, 2552, 2628
BstNSI RCATGY 1 cut(s) 2771
BstPI GGTNACC 2 cut(s) 1380, 2225
BstSFI CTRYAG 5 cut(s) 869, 1023, 1512, 1946, 2310
BstSLI GKGCMC 1 cut(s) 150
BstUI CGCG 2 cut(s) 435, 437
BstV1I GCAGC 9 cut(s) 283, 568, 855, 1357, 2040, 2114, 2588, 2946, 2974
BstV2I GAAGAC 5 cut(s) 410, 894, 1145, 1423, 2517
BstX2I RGATCY 8 cut(s) 793, 875, 1188, 1610, 2011, 2131, 2233, 2245
BstXI CCANNNNNNTGG 1 cut(s) 538
BstYI RGATCY 8 cut(s) 793, 875, 1188, 1610, 2011, 2131, 2233, 2245
BstZ17I GTATAC 1 cut(s) 1674
Bsu15I ATCGAT 1 cut(s) 1206
BsuI GTATCC 1 cut(s) 1305
BsuTUI ATCGAT 1 cut(s) 1206
BtrI CACGTC 1 cut(s) 1906
BtsIMutI CAGTG 6 cut(s) 578, 675, 837, 1037, 1955, 2945
BveI ACCTGC 3 cut(s) 352, 570, 1054
Cac8I GCNNGC 8 cut(s) 20, 640, 1122, 2382, 2765, 2813, 2854, 2961
CaiI CAGNNNCTG 3 cut(s) 796, 1046, 2135
CciI TCATGA 1 cut(s) 2296
CfoI GCGC 2 cut(s) 437, 1888
Cfr10I RCCGGY 1 cut(s) 2959
Cfr13I GGNCC 9 cut(s) 38, 185, 213, 1043, 1284, 1301, 1486, 2398, 2546
ClaI ATCGAT 1 cut(s) 1206
Csp6I GTAC 4 cut(s) 1705, 2346, 2670, 2953
CspCI CAANNNNNGTGG 2 cut(s) 337, 372
CviQI GTAC 4 cut(s) 1705, 2346, 2670, 2953
DraI TTTAAA 2 cut(s) 1212, 2530
EaeI YGGCCR 3 cut(s) 112, 640, 2979
Eam1104I CTCTTC 3 cut(s) 68, 608, 2571
EarI CTCTTC 3 cut(s) 68, 608, 2571
Ecl136II GAGCTC 1 cut(s) 1594
Eco130I CCWWGG 3 cut(s) 480, 522, 1252
Eco147I AGGCCT 2 cut(s) 964, 1021
Eco24I GRGCYC 2 cut(s) 1596, 1810
Eco31I GGTCTC 2 cut(s) 342, 2024
Eco32I GATATC 2 cut(s) 1767, 2782
Eco47I GGWCC 7 cut(s) 38, 213, 1043, 1284, 1301, 1486, 2546
Eco53kI GAGCTC 1 cut(s) 1594
Eco57I CTGAAG 2 cut(s) 1062, 3051
Eco72I CACGTG 1 cut(s) 1584
Eco88I CYCGRG 2 cut(s) 1453, 2661
Eco91I GGTNACC 2 cut(s) 1380, 2225
EcoICRI GAGCTC 1 cut(s) 1594
EcoO109I RGGNCCY 3 cut(s) 1043, 1301, 1486
EcoO65I GGTNACC 2 cut(s) 1380, 2225
EcoRI GAATTC 3 cut(s) 139, 1258, 1357
EcoRII CCWGG 7 cut(s) 1279, 1537, 2124, 2157, 2229, 2550, 2626
EcoRV GATATC 2 cut(s) 1767, 2782
EcoT14I CCWWGG 3 cut(s) 480, 522, 1252
EcoT22I ATGCAT 3 cut(s) 519, 2698, 2887
EcoT38I GRGCYC 2 cut(s) 1596, 1810
ErhI CCWWGG 3 cut(s) 480, 522, 1252
FalI AAGNNNNNCTT 4 cut(s) 873, 905, 2309, 2341
FaqI GGGAC 5 cut(s) 122, 433, 1287, 1297, 2532
FauI CCCGC 1 cut(s) 2756
FauNDI CATATG 2 cut(s) 1222, 2686
FbaI TGATCA 1 cut(s) 775
FblI GTMKAC 2 cut(s) 628, 1673
FriOI GRGCYC 2 cut(s) 1596, 1810
FspBI CTAG 9 cut(s) 1253, 1395, 1571, 1677, 1868, 2243, 2580, 2853, 2924
GlaI GCGC 2 cut(s) 436, 1887
GsaI CCCAGC 1 cut(s) 336
GsuI CTGGAG 1 cut(s) 1675
HhaI GCGC 2 cut(s) 437, 1888
Hin6I GCGC 2 cut(s) 435, 1886
HinP1I GCGC 2 cut(s) 435, 1886
HincII GTYRAC 3 cut(s) 569, 2353, 2559
HindII GTYRAC 3 cut(s) 569, 2353, 2559
HindIII AAGCTT 4 cut(s) 350, 1893, 2330, 2646
HinfI GANTC 9 cut(s) 1229, 1289, 1322, 1364, 1411, 1959, 1995, 2480, 2560
HphI GGTGA 3 cut(s) 1100, 1374, 2219
Hpy166II GTNNAC 8 cut(s) 367, 569, 629, 887, 1674, 2353, 2559, 2953
Hpy8I GTNNAC 8 cut(s) 367, 569, 629, 887, 1674, 2353, 2559, 2953
Hpy99I CGWCG 1 cut(s) 498
HpyCH4IV ACGT 5 cut(s) 631, 1583, 1905, 2499, 2601
HpyF10VI GCNNNNNNNGC 5 cut(s) 358, 533, 1892, 1942, 2987
HpySE526I ACGT 5 cut(s) 631, 1583, 1905, 2499, 2601
HspAI GCGC 2 cut(s) 435, 1886
KroI GCCGGC 1 cut(s) 2959
KroNI GCCGGC 1 cut(s) 2961
Ksp22I TGATCA 1 cut(s) 775
LmnI GCTCC 3 cut(s) 698, 1591, 3064
Lsp1109I GCAGC 9 cut(s) 283, 568, 855, 1357, 2040, 2114, 2588, 2946, 2974
LweI GCATC 7 cut(s) 1058, 1624, 1671, 1782, 1962, 2599, 2705
MaeI CTAG 9 cut(s) 1253, 1395, 1571, 1677, 1868, 2243, 2580, 2853, 2924
MaeII ACGT 5 cut(s) 631, 1583, 1905, 2499, 2601
MaeIII GTNAC 7 cut(s) 1059, 1131, 1380, 1854, 1981, 2225, 2943
MbiI CCGCTC 1 cut(s) 2763
MfeI CAATTG 1 cut(s) 1782
MflI RGATCY 8 cut(s) 793, 875, 1188, 1610, 2011, 2131, 2233, 2245
MhlI GDGCHC 6 cut(s) 150, 1596, 1810, 1867, 2601, 3026
MlsI TGGCCA 2 cut(s) 642, 2981
MluNI TGGCCA 2 cut(s) 642, 2981
MlyI GAGTC 4 cut(s) 1298, 1358, 1420, 2554
MmeI TCCRAC 5 cut(s) 203, 240, 453, 1061, 2064
Mox20I TGGCCA 2 cut(s) 642, 2981
Mph1103I ATGCAT 3 cut(s) 519, 2698, 2887
MroNI GCCGGC 1 cut(s) 2959
MroXI GAANNNNTTC 1 cut(s) 1075
MscI TGGCCA 2 cut(s) 642, 2981
MslI CAYNNNNRTG 2 cut(s) 536, 1237
Msp20I TGGCCA 2 cut(s) 642, 2981
MspA1I CMGCKG 3 cut(s) 559, 1370, 2105
MunI CAATTG 1 cut(s) 1782
Mva1269I GAATGC 1 cut(s) 517
MvaI CCWGG 7 cut(s) 1281, 1539, 2126, 2159, 2231, 2552, 2628
MvnI CGCG 2 cut(s) 435, 437
MwoI GCNNNNNNNGC 5 cut(s) 358, 533, 1892, 1942, 2987
NaeI GCCGGC 1 cut(s) 2961
NciI CCSGG 3 cut(s) 252, 397, 2787
NdeI CATATG 2 cut(s) 1222, 2686
NgoMIV GCCGGC 1 cut(s) 2959
NheI GCTAGC 1 cut(s) 2852
NmeAIII GCCGAG 1 cut(s) 1470
NmuCI GTSAC 4 cut(s) 1131, 1380, 2225, 2943
NsiI ATGCAT 3 cut(s) 519, 2698, 2887
NspI RCATGY 1 cut(s) 2771
NspV TTCGAA 1 cut(s) 2419
OliI CACNNNNGTG 1 cut(s) 1237
PaeR7I CTCGAG 1 cut(s) 2661
PagI TCATGA 1 cut(s) 2296
PasI CCCWGGG 1 cut(s) 2551
PceI AGGCCT 2 cut(s) 964, 1021
PctI GAATGC 1 cut(s) 517
PdiI GCCGGC 1 cut(s) 2961
PdmI GAANNNNTTC 1 cut(s) 1075
PfeI GAWTC 5 cut(s) 1229, 1322, 1959, 1995, 2480
PflFI GACNNNGTC 3 cut(s) 1032, 1288, 2223
PflMI CCANNNNNTGG 2 cut(s) 935, 2164
PfoI TCCNGGA 1 cut(s) 2626
PleI GAGTC 4 cut(s) 1297, 1358, 1419, 2554
PmaCI CACGTG 1 cut(s) 1584
PmlI CACGTG 1 cut(s) 1584
PpsI GAGTC 4 cut(s) 1297, 1358, 1419, 2554
Ppu21I YACGTR 2 cut(s) 1584, 2602
PpuMI RGGWCCY 3 cut(s) 1043, 1301, 1486
PshBI ATTAAT 1 cut(s) 2888
Psp124BI GAGCTC 1 cut(s) 1596
Psp5II RGGWCCY 3 cut(s) 1043, 1301, 1486
Psp6I CCWGG 7 cut(s) 1279, 1537, 2124, 2157, 2229, 2550, 2626
PspCI CACGTG 1 cut(s) 1584
PspEI GGTNACC 2 cut(s) 1380, 2225
PspFI CCCAGC 1 cut(s) 332
PspGI CCWGG 7 cut(s) 1279, 1537, 2124, 2157, 2229, 2550, 2626
PspPI GGNCC 9 cut(s) 38, 185, 213, 1043, 1284, 1301, 1486, 2398, 2546
PspPPI RGGWCCY 3 cut(s) 1043, 1301, 1486
PstI CTGCAG 1 cut(s) 873
PstNI CAGNNNCTG 3 cut(s) 796, 1046, 2135
PsuI RGATCY 8 cut(s) 793, 875, 1188, 1610, 2011, 2131, 2233, 2245
PsyI GACNNNGTC 3 cut(s) 1032, 1288, 2223
PvuII CAGCTG 2 cut(s) 1370, 2105
RsaI GTAC 4 cut(s) 1706, 2347, 2671, 2954
RsaNI GTAC 4 cut(s) 1705, 2346, 2670, 2953
RseI CAYNNNNRTG 2 cut(s) 536, 1237
SacI GAGCTC 1 cut(s) 1596
Sau96I GGNCC 9 cut(s) 38, 185, 213, 1043, 1284, 1301, 1486, 2398, 2546
ScaI AGTACT 1 cut(s) 2347
SchI GAGTC 4 cut(s) 1298, 1358, 1420, 2554
SduI GDGCHC 6 cut(s) 150, 1596, 1810, 1867, 2601, 3026
SfaNI GCATC 7 cut(s) 1058, 1624, 1671, 1782, 1962, 2599, 2705
SfcI CTRYAG 5 cut(s) 869, 1023, 1512, 1946, 2310
Sfr274I CTCGAG 1 cut(s) 2661
SfuI TTCGAA 1 cut(s) 2419
SinI GGWCC 7 cut(s) 38, 213, 1043, 1284, 1301, 1486, 2546
SlaI CTCGAG 1 cut(s) 2661
SmiI ATTTAAAT 1 cut(s) 1212
SmiMI CAYNNNNRTG 2 cut(s) 536, 1237
SmlI CTYRAG 6 cut(s) 347, 879, 1141, 2661, 2756, 3082
SmoI CTYRAG 6 cut(s) 347, 879, 1141, 2661, 2756, 3082
SseBI AGGCCT 2 cut(s) 964, 1021
SsiI CCGC 8 cut(s) 62, 433, 437, 559, 1638, 2378, 2710, 2763
SspI AATATT 2 cut(s) 832, 2142
SspMI CTAG 9 cut(s) 1253, 1395, 1571, 1677, 1868, 2243, 2580, 2853, 2924
SstI GAGCTC 1 cut(s) 1596
StuI AGGCCT 2 cut(s) 964, 1021
StyI CCWWGG 3 cut(s) 480, 522, 1252
SwaI ATTTAAAT 1 cut(s) 1212
TaiI ACGT 5 cut(s) 634, 1586, 1908, 2502, 2604
TaqI TCGA 4 cut(s) 1206, 2419, 2662, 2972
TaqII GACCGA 2 cut(s) 1301, 1368
TatI WGTACW 4 cut(s) 1704, 2345, 2669, 2952
TauI GCSGC 2 cut(s) 1640, 2712
TfiI GAWTC 5 cut(s) 1229, 1322, 1959, 1995, 2480
TscAI CASTG 6 cut(s) 578, 682, 844, 1037, 1955, 2952
TseFI GTSAC 4 cut(s) 1131, 1380, 2225, 2943
TseI GCWGC 9 cut(s) 296, 556, 868, 1370, 2028, 2102, 2576, 2934, 2987
Tsp45I GTSAC 4 cut(s) 1131, 1380, 2225, 2943
TspGWI ACGGA 5 cut(s) 895, 1146, 1433, 1556, 2362
TspRI CASTG 6 cut(s) 578, 682, 844, 1037, 1955, 2952
Tth111I GACNNNGTC 3 cut(s) 1032, 1288, 2223
Van91I CCANNNNNTGG 2 cut(s) 935, 2164
VpaK11BI GGWCC 7 cut(s) 38, 213, 1043, 1284, 1301, 1486, 2546
VspI ATTAAT 1 cut(s) 2888
XapI RAATTY 3 cut(s) 139, 1258, 1357
XbaI TCTAGA 2 cut(s) 1570, 1867
XceI RCATGY 1 cut(s) 2771
XcmI CCANNNNNNNNNTGG 1 cut(s) 538
XhoI CTCGAG 1 cut(s) 2661
XmaJI CCTAGG 1 cut(s) 1252
XmiI GTMKAC 2 cut(s) 628, 1673
XmnI GAANNNNTTC 1 cut(s) 1075
XspI CTAG 9 cut(s) 1253, 1395, 1571, 1677, 1868, 2243, 2580, 2853, 2924
ZrmI AGTACT 1 cut(s) 2347
Zsp2I ATGCAT 3 cut(s) 519, 2698, 2887
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.