RLG00000007746

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
20598293 .. 20599189
897 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007746

Sequence Viewer

Length: 576 bp
ATGATATTAATCTTTGTGTGTGTGTTGCTTCTCTTAGCTCTGATCAAGGCCTTTCACAAACTATGGTGGACTCCTATTCGCATTCAGAATCTGATGGCTGTGCAGGGAATCAGAGGTCCTTCTCACAGACTTCTCTATGAGAACTCCACAGAAATCGCCAACATGAAAAAGGAAGCCATGAGCAGACCCATAAGTTTATCACATGATATATTTTCTCACGTTCAACCCCATATTCACGCATGGACCAAGAGTTATGGGAAGAATTTTCTTCAATTGTATGGTGTTAAACCTGTTTTGTTGAGAAAGCTGTCTAACCTTGCCTTCCATGGAGAGAGTTTAAAGAATATGTTTCCAGACATGATAGCTAGTGCTGAGTCGATGGTAGAAAGGTGGAAAAATCATGAAGGAAAAGAAATTGAGGTGTTTGAAGAATTTAGGTTGCTGACTTCAGAAGTGATTTCCAGGACAGCATTTGGCAGCAGCTACTTAGAAGGGAAGATTTTTGATATGTTGATGAAGCTATCCTCCATAATATTCAGAAATCTTCTCAACATCAGGTTCCCTGGCATGAGGTAG

Protein Analysis

192

Amino Acids

22.18

Weight (kDa)

9.75

Isoelectric Point (pI)

37.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 83 - 182 7.8e-08 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 262, 431
AcuI CTGAAG 1 cut(s) 432
AgsI TTSAA 3 cut(s) 224, 272, 428
AjnI CCWGG 2 cut(s) 461, 562
AluBI AGCT 5 cut(s) 38, 307, 365, 483, 520
AluI AGCT 5 cut(s) 38, 307, 365, 483, 520
AlwNI CAGNNNCTG 1 cut(s) 91
AoxI GGCC 1 cut(s) 48
ApeKI GCWGC 2 cut(s) 477, 480
ApoI RAATTY 2 cut(s) 262, 431
AseI ATTAAT 1 cut(s) 8
AspS9I GGNCC 2 cut(s) 116, 243
AvaII GGWCC 2 cut(s) 116, 243
BbvI GCAGC 2 cut(s) 489, 492
BccI CCATC 2 cut(s) 88, 373
BciT130I CCWGG 2 cut(s) 463, 564
BclI TGATCA 1 cut(s) 42
BfaI CTAG 1 cut(s) 366
BisI GCNGC 2 cut(s) 478, 481
BlsI GCNGC 2 cut(s) 479, 482
Bme1390I CCNGG 2 cut(s) 463, 564
Bme18I GGWCC 2 cut(s) 116, 243
BmgT120I GGNCC 2 cut(s) 116, 243
BmiI GGNNCC 1 cut(s) 560
BmrFI CCNGG 2 cut(s) 463, 564
BsaBI GATNNNNATC 1 cut(s) 8
BsaJI CCNNGG 2 cut(s) 325, 562
Bse8I GATNNNNATC 1 cut(s) 8
BseBI CCWGG 2 cut(s) 463, 564
BseDI CCNNGG 2 cut(s) 325, 562
BseJI GATNNNNATC 1 cut(s) 8
BseMII CTCAG 1 cut(s) 363
BseXI GCAGC 2 cut(s) 489, 492
BsgI GTGCAG 1 cut(s) 122
BshFI GGCC 1 cut(s) 50
BsmI GAATGC 1 cut(s) 81
BsnI GGCC 1 cut(s) 50
Bsp143I GATC 1 cut(s) 42
Bsp19I CCATGG 1 cut(s) 325
BspANI GGCC 1 cut(s) 50
BspCNI CTCAG 1 cut(s) 364
BspHI TCATGA 1 cut(s) 400
BspLI GGNNCC 1 cut(s) 560
BssECI CCNNGG 2 cut(s) 325, 562
BssMI GATC 1 cut(s) 42
BssT1I CCWWGG 1 cut(s) 325
Bst2UI CCWGG 2 cut(s) 463, 564
BstDEI CTNAG 3 cut(s) 34, 372, 487
BstDSI CCRYGG 1 cut(s) 325
BstKTI GATC 1 cut(s) 45
BstMBI GATC 1 cut(s) 42
BstNI CCWGG 2 cut(s) 463, 564
BstSCI CCNGG 2 cut(s) 461, 562
BstV1I GCAGC 2 cut(s) 489, 492
BsuRI GGCC 1 cut(s) 50
BtgI CCRYGG 1 cut(s) 325
CaiI CAGNNNCTG 1 cut(s) 91
CciI TCATGA 1 cut(s) 400
Cfr13I GGNCC 2 cut(s) 116, 243
CviAII CATG 8 cut(s) 163, 178, 203, 240, 326, 358, 401, 568
CviJI RGCY 8 cut(s) 38, 50, 98, 176, 307, 365, 483, 520
CviKI_1 RGCY 8 cut(s) 38, 50, 98, 176, 307, 365, 483, 520
DdeI CTNAG 3 cut(s) 34, 372, 487
DpnI GATC 1 cut(s) 44
DpnII GATC 1 cut(s) 42
DraI TTTAAA 1 cut(s) 339
Eco130I CCWWGG 1 cut(s) 325
Eco147I AGGCCT 1 cut(s) 50
Eco47I GGWCC 2 cut(s) 116, 243
Eco57I CTGAAG 1 cut(s) 432
EcoO109I RGGNCCY 1 cut(s) 116
EcoRII CCWGG 2 cut(s) 461, 562
EcoT14I CCWWGG 1 cut(s) 325
ErhI CCWWGG 1 cut(s) 325
FaeI CATG 8 cut(s) 166, 181, 206, 243, 329, 361, 404, 571
FatI CATG 8 cut(s) 162, 177, 202, 239, 325, 357, 400, 567
FbaI TGATCA 1 cut(s) 42
Fnu4HI GCNGC 2 cut(s) 478, 481
Fsp4HI GCNGC 2 cut(s) 478, 481
FspBI CTAG 1 cut(s) 366
GluI GCNGC 2 cut(s) 478, 481
HaeIII GGCC 1 cut(s) 50
Hin1II CATG 8 cut(s) 166, 181, 206, 243, 329, 361, 404, 571
HinfI GANTC 4 cut(s) 70, 88, 108, 374
Hpy166II GTNNAC 1 cut(s) 69
Hpy188I TCNGA 6 cut(s) 42, 87, 93, 113, 451, 539
Hpy188III TCNNGA 2 cut(s) 353, 401
Hpy8I GTNNAC 1 cut(s) 69
HpyAV CCTTC 4 cut(s) 129, 331, 398, 485
HpyCH4IV ACGT 1 cut(s) 219
HpyCH4V TGCA 1 cut(s) 103
HpyF3I CTNAG 3 cut(s) 34, 372, 487
HpySE526I ACGT 1 cut(s) 219
Hsp92II CATG 8 cut(s) 166, 181, 206, 243, 329, 361, 404, 571
Ksp22I TGATCA 1 cut(s) 42
Kzo9I GATC 1 cut(s) 42
LpnPI CCDG 7 cut(s) 89, 303, 366, 448, 475, 541, 549
Lsp1109I GCAGC 2 cut(s) 489, 492
MaeI CTAG 1 cut(s) 366
MaeII ACGT 1 cut(s) 219
MalI GATC 1 cut(s) 44
MboI GATC 1 cut(s) 42
MboII GAAGA 5 cut(s) 260, 271, 440, 508, 536
MfeI CAATTG 1 cut(s) 272
MluCI AATT 4 cut(s) 262, 272, 414, 431
MlyI GAGTC 2 cut(s) 64, 383
MnlI CCTC 4 cut(s) 107, 412, 535, 564
MseI TTAA 3 cut(s) 8, 285, 338
MspR9I CCNGG 2 cut(s) 463, 564
MunI CAATTG 1 cut(s) 272
Mva1269I GAATGC 1 cut(s) 81
MvaI CCWGG 2 cut(s) 463, 564
NcoI CCATGG 1 cut(s) 325
NdeII GATC 1 cut(s) 42
NlaIII CATG 8 cut(s) 166, 181, 206, 243, 329, 361, 404, 571
NlaIV GGNNCC 1 cut(s) 560
PagI TCATGA 1 cut(s) 400
PceI AGGCCT 1 cut(s) 50
PctI GAATGC 1 cut(s) 81
PfeI GAWTC 2 cut(s) 88, 108
PfoI TCCNGGA 1 cut(s) 461
PkrI GCNGC 2 cut(s) 479, 482
PleI GAGTC 2 cut(s) 64, 382
PpsI GAGTC 2 cut(s) 64, 382
PpuMI RGGWCCY 1 cut(s) 116
PshBI ATTAAT 1 cut(s) 8
Psp5II RGGWCCY 1 cut(s) 116
Psp6I CCWGG 2 cut(s) 461, 562
PspGI CCWGG 2 cut(s) 461, 562
PspN4I GGNNCC 1 cut(s) 560
PspPI GGNCC 2 cut(s) 116, 243
PspPPI RGGWCCY 1 cut(s) 116
PstNI CAGNNNCTG 1 cut(s) 91
SaqAI TTAA 3 cut(s) 8, 285, 338
SatI GCNGC 2 cut(s) 478, 481
Sau3AI GATC 1 cut(s) 42
Sau96I GGNCC 2 cut(s) 116, 243
SchI GAGTC 2 cut(s) 64, 383
ScrFI CCNGG 2 cut(s) 463, 564
SinI GGWCC 2 cut(s) 116, 243
Sse9I AATT 4 cut(s) 262, 272, 414, 431
SseBI AGGCCT 1 cut(s) 50
SspI AATATT 1 cut(s) 534
SspMI CTAG 1 cut(s) 366
StuI AGGCCT 1 cut(s) 50
StyD4I CCNGG 2 cut(s) 461, 562
StyI CCWWGG 1 cut(s) 325
TaiI ACGT 1 cut(s) 222
TaqI TCGA 1 cut(s) 377
TasI AATT 4 cut(s) 262, 272, 414, 431
TfiI GAWTC 2 cut(s) 88, 108
Tru1I TTAA 3 cut(s) 8, 285, 338
Tru9I TTAA 3 cut(s) 8, 285, 338
TseI GCWGC 2 cut(s) 477, 480
TspDTI ATGAA 3 cut(s) 179, 417, 530
VpaK11BI GGWCC 2 cut(s) 116, 243
VspI ATTAAT 1 cut(s) 8
XapI RAATTY 2 cut(s) 262, 431
XspI CTAG 1 cut(s) 366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.