MD16G1056600.v1.1

cytochrome P450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0000078
Physical Location & Seq
Reverse (-)
4054837 .. 4056867
2031 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1056600.v1.1.491

Sequence Viewer

Length: 1563 bp
ATGAGTTGGTTCTTGTTCGAAATGCCAGTACTTACTACTTCAAGCTTTCTGTGTCTGTTGCTAGTGATTCTTTTAGCTCTCCTGATCAAGAACTTTCAGAAACTATGGTGGACTCCAAACCACATACAGAATCAGATGGCTGCGCAAGGAGTCCATGGCCCTTCATACAAATTTATCCATGGAAGCACCAAAGAAATATTGAGCATGAAAAGGGAAACAATGGGAAGGCCTAGAAGTTTAACCCATGACATATTTTCTGCAGTTCAGCCTCATATTCACGCATGGAGCAAGATATTTGGGAAGAATTTTCTTCAGTGGTATGGTGTTCAACCACAGATGATCATTGCGGAACCTGAGCTGTGCAAAGAGGTACTAAACAACAAAGATAGAAACTATCGGAAACAAAGGTCCCAAGGCTACATCAAGAAGCTATTAGGAGACAGCATTTCAATGGCAGAAGGTGAAAAGTGGGTGAAACTAAGAAAGCTGGCGCACCATGCCTTCCATGGAGAGAACTTAAAAAATATGATTCCTGAAATGATAAAGAGTTCTGAGACGATGGTACAAAGATGGAAAACTTATGAAGGCAAGGAGATTGAGGTGAATGAAGAGTTTAGGTTTTTCACCTCAGAAGTGATTTCTAGGACAGCATTTGGCAGCAGCTTCTTAGAAGGAAAGAACATTTTTGAAATGTTGAGGGAGTTAACCTCCTTAATATTCAGAAATACTTTCAAACTCAGGTTTCCTGGCATCAGTATGTTTTATAAAACCAGTGATGAGATAAAATCAGAGAAGCTCGAGAAAGGCATTCGCGACATCATCACAGAGATTGTTAGGAAAAGAGAAAAGACAGCAAGGACTGGAGAGGCAGGCGGTTTTGGAAGAGATTATCTTGGAATACTTTTAAAGGCTCATCATGATGCGAATGAGAAGCAGCGGATTTCGGTGGACGATTTAGTTGATGAGTGCAAGACGTTTTACTTTGCTGGACAAGAAACCACTAACTCTTTGCTTGCTTGGACCGTCTTTCTTCTGGCTCTTCATACAGATTGGCAAGAGGAAGCTAGAAAGGAGGTCCTAGAATTGTTTGGTAAAGAAAATCCAAATACTGATGGCCTCAACAAATTAAAAACGATGGGTATGATCATCAATGAGGCTCTAAGGTTATATCCTCCTGTTGTTTCCCTTACTCGGGAATCTCTAAAGGAAGTTAGACTGGGACAGATCGTTGTTCCCGCTAATGTTGAATTGCACGTCGCAAATCTGGCACTTCACCATGACCCTAAATATTGGGGAAAAGACGTGCAACTTTTCAAACCAGAGAGATTCTCAGAAGGGGTTGCTAAAGCTACTAACAACAATGCGGTCGCATTCATGCCCTTTGGAATGGGACCTCGAACCTGTGTGGGCATGAACTTTGCAATCATCGAAGCAAAGATTGCTCTTTCAATGATTCTGCAACGCTACAGTTTCACTCTTTCCCCGGGTTACGTGCACTCCCCCATTCAGTTTCTGACAGTTCGCCCGCAACATGGTGTTCAAGTGATACTACACCCAGTTTGA

Protein Analysis

521

Amino Acids

59.79

Weight (kDa)

9.28

Isoelectric Point (pI)

35.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 93 - 510 3.5e-78 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 765
Acc16I TGCGCA 1 cut(s) 144
AccII CGCG 1 cut(s) 813
AciI CCGC 6 cut(s) 347, 873, 937, 1236, 1364, 1526
AcsI RAATTY 2 cut(s) 170, 304
AcuI CTGAAG 1 cut(s) 296
AfaI GTAC 3 cut(s) 30, 372, 564
AfiI CCNNNNNNNGG 3 cut(s) 1191, 1192, 1532
AgsI TTSAA 9 cut(s) 42, 329, 450, 689, 733, 1247, 1315, 1449, 1541
AjiI CACGTC 2 cut(s) 1255, 1303
AjnI CCWGG 1 cut(s) 745
AluBI AGCT 9 cut(s) 45, 77, 358, 430, 487, 663, 796, 1064, 1349
AluI AGCT 9 cut(s) 45, 77, 358, 430, 487, 663, 796, 1064, 1349
Alw21I GWGCWC 1 cut(s) 1497
Alw26I GTCTC 2 cut(s) 432, 548
Alw44I GTGCAC 1 cut(s) 1493
AlwNI CAGNNNCTG 1 cut(s) 1513
Ama87I CYCGRG 3 cut(s) 797, 1191, 1483
AoxI GGCC 3 cut(s) 157, 227, 1114
ApaLI GTGCAC 1 cut(s) 1493
ApeKI GCWGC 4 cut(s) 140, 657, 660, 934
ApoI RAATTY 2 cut(s) 170, 304
AspLEI GCGC 2 cut(s) 145, 493
AspS9I GGNCC 5 cut(s) 158, 408, 1020, 1075, 1391
AsuC2I CCSGG 2 cut(s) 1484, 1485
AsuHPI GGTGA 5 cut(s) 473, 484, 613, 616, 1265
AsuII TTCGAA 1 cut(s) 18
AvaI CYCGRG 3 cut(s) 797, 1191, 1483
AvaII GGWCC 4 cut(s) 408, 1020, 1075, 1391
BaeGI GKGCMC 1 cut(s) 1497
Bbv12I GWGCWC 1 cut(s) 1497
BbvI GCAGC 4 cut(s) 127, 669, 672, 946
BccI CCATC 5 cut(s) 130, 553, 564, 1106, 1129
BciT130I CCWGG 1 cut(s) 747
BclI TGATCA 3 cut(s) 84, 339, 1143
BcnI CCSGG 2 cut(s) 1484, 1485
BcoDI GTCTC 2 cut(s) 432, 548
BfaI CTAG 5 cut(s) 62, 231, 642, 1065, 1079
BfmI CTRYAG 2 cut(s) 258, 1465
BisI GCNGC 4 cut(s) 141, 658, 661, 935
BlsI GCNGC 4 cut(s) 142, 659, 662, 936
BmcAI AGTACT 1 cut(s) 30
Bme1390I CCNGG 3 cut(s) 747, 1484, 1485
Bme18I GGWCC 4 cut(s) 408, 1020, 1075, 1391
BmeT110I CYCGRG 3 cut(s) 797, 1191, 1483
BmgBI CACGTC 2 cut(s) 1255, 1303
BmgT120I GGNCC 5 cut(s) 158, 408, 1020, 1075, 1391
BmiI GGNNCC 3 cut(s) 351, 410, 1392
BmrFI CCNGG 3 cut(s) 747, 1484, 1485
BmrI ACTGGG 2 cut(s) 1226, 1550
BmsI GCATC 2 cut(s) 759, 910
BmuI ACTGGG 2 cut(s) 1226, 1550
BplI GAGNNNNNCTC 4 cut(s) 692, 724, 1313, 1345
BpmI CTGGAG 1 cut(s) 882
Bpu10I CCTNAGC 1 cut(s) 354
Bpu14I TTCGAA 1 cut(s) 18
BpuMI CCSGG 2 cut(s) 1484, 1485
BsaAI YACGTR 1 cut(s) 1492
BsaJI CCNNGG 6 cut(s) 154, 178, 412, 505, 1482, 1483
BsaXI ACNNNNNCTCC 2 cut(s) 1481, 1511
Bsc4I CCNNNNNNNGG 3 cut(s) 1191, 1192, 1532
Bse1I ACTGG 5 cut(s) 26, 771, 865, 1221, 1556
Bse3DI GCAATG 1 cut(s) 342
BseBI CCWGG 1 cut(s) 747
BseDI CCNNGG 6 cut(s) 154, 178, 412, 505, 1482, 1483
BseLI CCNNNNNNNGG 3 cut(s) 1191, 1192, 1532
BseMI GCAATG 1 cut(s) 342
BseMII CTCAG 5 cut(s) 345, 543, 642, 751, 1344
BseNI ACTGG 5 cut(s) 26, 771, 865, 1221, 1556
BseSI GKGCMC 1 cut(s) 1497
BseXI GCAGC 4 cut(s) 127, 669, 672, 946
Bsh1236I CGCG 1 cut(s) 813
Bsh1285I CGRYCG 1 cut(s) 1368
BshFI GGCC 3 cut(s) 159, 229, 1116
BsiEI CGRYCG 1 cut(s) 1368
BsiHKAI GWGCWC 1 cut(s) 1497
BsiHKCI CYCGRG 3 cut(s) 797, 1191, 1483
BsiSI CCGG 1 cut(s) 1484
BslFI GGGAC 3 cut(s) 394, 1233, 1404
BslI CCNNNNNNNGG 3 cut(s) 1191, 1192, 1532
BsmAI GTCTC 2 cut(s) 432, 548
BsmBI CGTCTC 1 cut(s) 548
BsmFI GGGAC 3 cut(s) 394, 1233, 1404
BsmI GAATGC 2 cut(s) 807, 1370
BsnI GGCC 3 cut(s) 159, 229, 1116
BsoBI CYCGRG 3 cut(s) 797, 1191, 1483
Bsp119I TTCGAA 1 cut(s) 18
Bsp1286I GDGCHC 1 cut(s) 1497
Bsp143I GATC 4 cut(s) 84, 339, 1143, 1224
Bsp19I CCATGG 3 cut(s) 154, 178, 505
Bsp68I TCGCGA 1 cut(s) 813
BspACI CCGC 6 cut(s) 347, 873, 937, 1236, 1364, 1526
BspANI GGCC 3 cut(s) 159, 229, 1116
BspCNI CTCAG 5 cut(s) 346, 544, 641, 750, 1343
BspFNI CGCG 1 cut(s) 813
BspHI TCATGA 1 cut(s) 916
BspLI GGNNCC 3 cut(s) 351, 410, 1392
BspMAI CTGCAG 1 cut(s) 262
BspQI GCTCTTC 1 cut(s) 1044
BspT104I TTCGAA 1 cut(s) 18
BsrDI GCAATG 1 cut(s) 342
BsrI ACTGG 5 cut(s) 26, 771, 865, 1221, 1556
BssECI CCNNGG 6 cut(s) 154, 178, 412, 505, 1482, 1483
BssMI GATC 4 cut(s) 84, 339, 1143, 1224
BssT1I CCWWGG 4 cut(s) 154, 178, 412, 505
Bst2UI CCWGG 1 cut(s) 747
Bst4CI ACNGT 3 cut(s) 1024, 1469, 1519
Bst6I CTCTTC 3 cut(s) 603, 877, 1044
BstAPI GCANNNNNTGC 1 cut(s) 1439
BstBAI YACGTR 1 cut(s) 1492
BstBI TTCGAA 1 cut(s) 18
BstC8I GCNNGC 4 cut(s) 489, 871, 1014, 1526
BstDEI CTNAG 8 cut(s) 354, 479, 552, 628, 667, 737, 1160, 1330
BstDSI CCRYGG 3 cut(s) 154, 178, 505
BstFNI CGCG 1 cut(s) 813
BstHHI GCGC 2 cut(s) 145, 493
BstKTI GATC 4 cut(s) 87, 342, 1146, 1227
BstMAI GTCTC 2 cut(s) 432, 548
BstMBI GATC 4 cut(s) 84, 339, 1143, 1224
BstMCI CGRYCG 1 cut(s) 1368
BstMWI GCNNNNNNNGC 3 cut(s) 497, 1265, 1439
BstNI CCWGG 1 cut(s) 747
BstSCI CCNGG 3 cut(s) 745, 1482, 1483
BstSFI CTRYAG 2 cut(s) 258, 1465
BstSLI GKGCMC 1 cut(s) 1497
BstUI CGCG 1 cut(s) 813
BstV1I GCAGC 4 cut(s) 127, 669, 672, 946
BsuRI GGCC 3 cut(s) 159, 229, 1116
BtgI CCRYGG 3 cut(s) 154, 178, 505
BtrI CACGTC 2 cut(s) 1255, 1303
BtsIMutI CAGTG 2 cut(s) 320, 778
BtuMI TCGCGA 1 cut(s) 813
Cac8I GCNNGC 4 cut(s) 489, 871, 1014, 1526
CaiI CAGNNNCTG 1 cut(s) 1513
CciI TCATGA 1 cut(s) 916
CfoI GCGC 2 cut(s) 145, 493
Cfr13I GGNCC 5 cut(s) 158, 408, 1020, 1075, 1391
Cfr9I CCCGGG 1 cut(s) 1483
Csp6I GTAC 3 cut(s) 29, 371, 563
CviQI GTAC 3 cut(s) 29, 371, 563
DdeI CTNAG 8 cut(s) 354, 479, 552, 628, 667, 737, 1160, 1330
DpnI GATC 4 cut(s) 86, 341, 1145, 1226
DpnII GATC 4 cut(s) 84, 339, 1143, 1224
DraI TTTAAA 1 cut(s) 906
Eam1104I CTCTTC 3 cut(s) 603, 877, 1044
EarI CTCTTC 3 cut(s) 603, 877, 1044
Eco130I CCWWGG 4 cut(s) 154, 178, 412, 505
Eco147I AGGCCT 1 cut(s) 229
Eco47I GGWCC 4 cut(s) 408, 1020, 1075, 1391
Eco57I CTGAAG 1 cut(s) 296
Eco88I CYCGRG 3 cut(s) 797, 1191, 1483
EcoO109I RGGNCCY 3 cut(s) 408, 1075, 1391
EcoRII CCWGG 1 cut(s) 745
EcoT14I CCWWGG 4 cut(s) 154, 178, 412, 505
ErhI CCWWGG 4 cut(s) 154, 178, 412, 505
Esp3I CGTCTC 1 cut(s) 548
FaqI GGGAC 3 cut(s) 394, 1233, 1404
FauI CCCGC 2 cut(s) 1243, 1533
FbaI TGATCA 3 cut(s) 84, 339, 1143
Fnu4HI GCNGC 4 cut(s) 141, 658, 661, 935
Fsp4HI GCNGC 4 cut(s) 141, 658, 661, 935
FspBI CTAG 5 cut(s) 62, 231, 642, 1065, 1079
FspI TGCGCA 1 cut(s) 144
GlaI GCGC 2 cut(s) 144, 492
GluI GCNGC 4 cut(s) 141, 658, 661, 935
GsuI CTGGAG 1 cut(s) 882
HaeIII GGCC 3 cut(s) 159, 229, 1116
HapII CCGG 1 cut(s) 1484
HhaI GCGC 2 cut(s) 145, 493
Hin6I GCGC 2 cut(s) 143, 491
HinP1I GCGC 2 cut(s) 143, 491
HincII GTYRAC 1 cut(s) 705
HindII GTYRAC 1 cut(s) 705
HindIII AAGCTT 1 cut(s) 43
HinfI GANTC 8 cut(s) 67, 112, 130, 150, 529, 1196, 1326, 1453
HpaI GTTAAC 1 cut(s) 705
HpaII CCGG 1 cut(s) 1484
HphI GGTGA 5 cut(s) 473, 484, 613, 616, 1265
Hpy166II GTNNAC 4 cut(s) 111, 705, 949, 1495
Hpy188I TCNGA 9 cut(s) 99, 135, 399, 553, 631, 722, 790, 1333, 1515
Hpy188III TCNNGA 8 cut(s) 82, 88, 424, 533, 799, 812, 917, 1193
Hpy8I GTNNAC 4 cut(s) 111, 705, 949, 1495
Hpy99I CGWCG 1 cut(s) 1259
HpyAV CCTTC 7 cut(s) 171, 219, 452, 511, 578, 665, 1328
HpyCH4III ACNGT 3 cut(s) 1024, 1469, 1519
HpyCH4IV ACGT 4 cut(s) 974, 1254, 1302, 1491
HpyCH4V TGCA 8 cut(s) 260, 363, 969, 1252, 1306, 1421, 1459, 1495
HpyF10VI GCNNNNNNNGC 3 cut(s) 497, 1265, 1439
HpyF3I CTNAG 8 cut(s) 354, 479, 552, 628, 667, 737, 1160, 1330
HpySE526I ACGT 4 cut(s) 974, 1254, 1302, 1491
HspAI GCGC 2 cut(s) 143, 491
Ksp22I TGATCA 3 cut(s) 84, 339, 1143
KspAI GTTAAC 1 cut(s) 705
Kzo9I GATC 4 cut(s) 84, 339, 1143, 1224
LguI GCTCTTC 1 cut(s) 1044
LmnI GCTCC 1 cut(s) 285
Lsp1109I GCAGC 4 cut(s) 127, 669, 672, 946
LweI GCATC 2 cut(s) 759, 910
MaeI CTAG 5 cut(s) 62, 231, 642, 1065, 1079
MaeII ACGT 4 cut(s) 974, 1254, 1302, 1491
MaeIII GTNAC 1 cut(s) 1487
MalI GATC 4 cut(s) 86, 341, 1145, 1226
MboI GATC 4 cut(s) 84, 339, 1143, 1224
MboII GAAGA 6 cut(s) 302, 313, 620, 894, 1022, 1031
MhlI GDGCHC 1 cut(s) 1497
MluCI AATT 5 cut(s) 170, 304, 1082, 1124, 1247
MlyI GAGTC 2 cut(s) 106, 159
MseI TTAA 6 cut(s) 239, 518, 704, 713, 905, 1127
MslI CAYNNNNRTG 3 cut(s) 449, 755, 918
MspA1I CMGCKG 1 cut(s) 937
MspI CCGG 1 cut(s) 1484
MspR9I CCNGG 3 cut(s) 747, 1484, 1485
Mva1269I GAATGC 2 cut(s) 807, 1370
MvaI CCWGG 1 cut(s) 747
MvnI CGCG 1 cut(s) 813
MwoI GCNNNNNNNGC 3 cut(s) 497, 1265, 1439
NciI CCSGG 2 cut(s) 1484, 1485
NcoI CCATGG 3 cut(s) 154, 178, 505
NdeII GATC 4 cut(s) 84, 339, 1143, 1224
NlaIV GGNNCC 3 cut(s) 351, 410, 1392
NruI TCGCGA 1 cut(s) 813
NsbI TGCGCA 1 cut(s) 144
NspV TTCGAA 1 cut(s) 18
PaeR7I CTCGAG 1 cut(s) 797
PagI TCATGA 1 cut(s) 916
PceI AGGCCT 1 cut(s) 229
PciSI GCTCTTC 1 cut(s) 1044
PctI GAATGC 2 cut(s) 807, 1370
PfeI GAWTC 6 cut(s) 67, 130, 529, 1196, 1326, 1453
PkrI GCNGC 4 cut(s) 142, 659, 662, 936
PleI GAGTC 2 cut(s) 106, 158
PpsI GAGTC 2 cut(s) 106, 158
Ppu21I YACGTR 1 cut(s) 1492
PpuMI RGGWCCY 3 cut(s) 408, 1075, 1391
PsiI TTATAA 1 cut(s) 765
Psp5II RGGWCCY 3 cut(s) 408, 1075, 1391
Psp6I CCWGG 1 cut(s) 745
PspGI CCWGG 1 cut(s) 745
PspN4I GGNNCC 3 cut(s) 351, 410, 1392
PspPI GGNCC 5 cut(s) 158, 408, 1020, 1075, 1391
PspPPI RGGWCCY 3 cut(s) 408, 1075, 1391
PstI CTGCAG 1 cut(s) 262
PstNI CAGNNNCTG 1 cut(s) 1513
RruI TCGCGA 1 cut(s) 813
RsaI GTAC 3 cut(s) 30, 372, 564
RsaNI GTAC 3 cut(s) 29, 371, 563
RseI CAYNNNNRTG 3 cut(s) 449, 755, 918
SapI GCTCTTC 1 cut(s) 1044
SaqAI TTAA 6 cut(s) 239, 518, 704, 713, 905, 1127
SatI GCNGC 4 cut(s) 141, 658, 661, 935
Sau3AI GATC 4 cut(s) 84, 339, 1143, 1224
Sau96I GGNCC 5 cut(s) 158, 408, 1020, 1075, 1391
ScaI AGTACT 1 cut(s) 30
SchI GAGTC 2 cut(s) 106, 159
ScrFI CCNGG 3 cut(s) 747, 1484, 1485
SduI GDGCHC 1 cut(s) 1497
SfaNI GCATC 2 cut(s) 759, 910
SfcI CTRYAG 2 cut(s) 258, 1465
Sfr274I CTCGAG 1 cut(s) 797
SfuI TTCGAA 1 cut(s) 18
SinI GGWCC 4 cut(s) 408, 1020, 1075, 1391
SlaI CTCGAG 1 cut(s) 797
SmaI CCCGGG 1 cut(s) 1485
SmiMI CAYNNNNRTG 3 cut(s) 449, 755, 918
SmlI CTYRAG 1 cut(s) 797
SmoI CTYRAG 1 cut(s) 797
Sse9I AATT 5 cut(s) 170, 304, 1082, 1124, 1247
SseBI AGGCCT 1 cut(s) 229
SsiI CCGC 6 cut(s) 347, 873, 937, 1236, 1364, 1526
SspI AATATT 3 cut(s) 198, 717, 1289
SspMI CTAG 5 cut(s) 62, 231, 642, 1065, 1079
StuI AGGCCT 1 cut(s) 229
StyD4I CCNGG 3 cut(s) 745, 1482, 1483
StyI CCWWGG 4 cut(s) 154, 178, 412, 505
TaaI ACNGT 3 cut(s) 1024, 1469, 1519
TaiI ACGT 4 cut(s) 977, 1257, 1305, 1494
TaqI TCGA 4 cut(s) 18, 798, 1396, 1428
TasI AATT 5 cut(s) 170, 304, 1082, 1124, 1247
TatI WGTACW 1 cut(s) 28
TfiI GAWTC 6 cut(s) 67, 130, 529, 1196, 1326, 1453
Tru1I TTAA 6 cut(s) 239, 518, 704, 713, 905, 1127
Tru9I TTAA 6 cut(s) 239, 518, 704, 713, 905, 1127
TscAI CASTG 2 cut(s) 320, 778
TseI GCWGC 4 cut(s) 140, 657, 660, 934
TspDTI ATGAA 7 cut(s) 153, 221, 597, 621, 1031, 1363, 1427
TspMI CCCGGG 1 cut(s) 1483
TspRI CASTG 2 cut(s) 320, 778
VneI GTGCAC 1 cut(s) 1493
VpaK11BI GGWCC 4 cut(s) 408, 1020, 1075, 1391
XapI RAATTY 2 cut(s) 170, 304
XcmI CCANNNNNNNNNTGG 1 cut(s) 503
XhoI CTCGAG 1 cut(s) 797
XmaI CCCGGG 1 cut(s) 1483
XspI CTAG 5 cut(s) 62, 231, 642, 1065, 1079
ZrmI AGTACT 1 cut(s) 30
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.