Rroxscaffold_5G00378800

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Reverse (-)
59297628 .. 59299531
1904 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00378800.1

Sequence Viewer

Length: 1425 bp
ATGGCTTCACAGGGAATCAGAGGACCTCCTTACAGACTTATCGATGGAAATGCCAAGGAAGTCTCCAACATGTGCAAGGAAGCCATGAGCAGGCCCTTGGATTTGTCGCACAACATATTACCAGTAGTTCTACCTCATGTTCATGCATGGACCAAAATCTATGGGAAGAATTATCTTCAGTGGCATGGTTCTCGGGCTGAGTTGGTGGTGACGGAAGCCGAGTTGTGCAAGGAGATACTCAGTAATAAAGATGGATTCTATCTGAAACCCAAGTTCAGAGCTTATGCAAAGAAGATATTTGGGAATGGCCTTCCACAATTAGAAGGTGAAAAATGGGCGAAATCGCGAAAGCTAGCCAACCATGCCTTCCATGGACAGAGCTTAAAAAATATGATTCCAGACATGATAGCTAGTGCTGAGACGATGCTAGGGAGGTGGAAAAGCCATGAAGAAGGGAAAGAAATGGAAGTGTATGAAGAATTTAGATTGTTAACTTCAGAAGTGATTGCTAGGACAGCATTTGGCAGCAGCTATGTAGAAGGGAAGAACATTTTTGATATGTTGATGAAATTAAGCTTATTCAAAAATGATTTCAAACTCAAGTTTCCAGGCTTCAGCAAGCTTTTTAGAACCAGCGATGATATCGAATCAGACAGGCTTGAGAAAGAAATACGTGACTCCATCAAGGGGATCATGAAGAAAAGAGAAGACAAGGCAATGAATGGGGAAGAAGAGAGCTTTGGGAGTGATTTTCTTGGTTTACTTTTAAAGGCTCATCATGATACCAATGACATTCAGAGGATTTCAGTGGACGATTTGGTTGATGAGTGCAAGTCATTTTACTTTGTTGGACAAGAGACCAGTAATACTTTGCTTTCATGGACTATCTTGCTTCTGGCACTCCATACTGATTGGCAAGAGAAAGCAAGAAAGGAAGTCCTACAATTATTTGGGAAACAGACTCTGAAGCCTGATGGCCTTGCCAAACTGAAAACCATGAGTATGATCTTTAATGAGTCCCTCAGGTTATATTCTCCAGCTGTTACCGTCACAAGGAGAGTTGAAAAGGATGTTAGACTAGGAAACCTCATTGTTCCTGCTAATGTTGAGTTGATCATTCCATCTCTGGCGCTTCACCATGAGCCCGAGTCCTGGGGACAAGACGCACAACTTTTCAAACCAGAGCGATTCTCTGACGGAGTTGCTAAAGCTTCTAACAACAACATCGCTACATTCTTACCCTTTGGAATGGGACCTAGAATTTGTGTTGGCCTCAACTTCGCCACCATTGAAGCCAAGATTGCTCTATCAATGATTCTACAACGCTACTCCTTTACCCTTTCCCCAGGCTATGTTCACATGCCCTTAAAGCATGTGACACTTCGCCCACAACATGGAGTTCAAGTAATGCTACACTCACTGTGA

Protein Analysis

474

Amino Acids

53.84

Weight (kDa)

8.85

Isoelectric Point (pI)

35.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 50 - 457 1.2e-71 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1394
AccII CGCG 1 cut(s) 346
AclWI GGATC 1 cut(s) 698
AcsI RAATTY 2 cut(s) 479, 1260
AcuI CTGAAG 4 cut(s) 161, 480, 598, 986
AfiI CCNNNNNNNGG 5 cut(s) 90, 687, 1053, 1152, 1394
AflIII ACRYGT 1 cut(s) 69
AgsI TTSAA 6 cut(s) 583, 595, 1064, 1177, 1292, 1403
AjnI CCWGG 3 cut(s) 607, 1151, 1345
AjuI GAANNNNNNNTTGG 4 cut(s) 350, 382, 723, 755
Alw26I GTCTC 3 cut(s) 67, 413, 851
AlwI GGATC 1 cut(s) 698
AlwNI CAGNNNCTG 1 cut(s) 964
Ama87I CYCGRG 2 cut(s) 192, 1145
AoxI GGCC 4 cut(s) 92, 307, 976, 1270
ApeKI GCWGC 2 cut(s) 525, 528
ApoI RAATTY 2 cut(s) 479, 1260
ArsI GACNNNNNNTTYG 2 cut(s) 1245, 1277
AspLEI GCGC 1 cut(s) 1132
AspS9I GGNCC 4 cut(s) 23, 93, 150, 1253
AsuHPI GGTGA 3 cut(s) 220, 338, 1127
AsuNHI GCTAGC 1 cut(s) 352
AvaI CYCGRG 2 cut(s) 192, 1145
AvaII GGWCC 3 cut(s) 23, 150, 1253
AxyI CCTNAGG 1 cut(s) 1022
BanII GRGCYC 1 cut(s) 1146
BbsI GAAGAC 1 cut(s) 714
BbvI GCAGC 2 cut(s) 537, 540
BccI CCATC 5 cut(s) 38, 245, 689, 968, 1129
BcgI CGANNNNNNTGC 4 cut(s) 32, 66, 173, 207
BciT130I CCWGG 3 cut(s) 609, 1153, 1347
BclI TGATCA 1 cut(s) 1113
BcoDI GTCTC 3 cut(s) 67, 413, 851
BfaI CTAG 6 cut(s) 353, 411, 428, 510, 1079, 1257
BfoI RGCGCY 1 cut(s) 1133
BisI GCNGC 2 cut(s) 526, 529
BlsI GCNGC 2 cut(s) 527, 530
Bme1390I CCNGG 3 cut(s) 609, 1153, 1347
Bme18I GGWCC 3 cut(s) 23, 150, 1253
BmeT110I CYCGRG 2 cut(s) 192, 1145
BmgT120I GGNCC 4 cut(s) 23, 93, 150, 1253
BmiI GGNNCC 1 cut(s) 1254
BmrFI CCNGG 3 cut(s) 609, 1153, 1347
BmsI GCATC 1 cut(s) 414
BmtI GCTAGC 1 cut(s) 356
BpiI GAAGAC 1 cut(s) 714
BplI GAGNNNNNCTC 2 cut(s) 1175, 1207
BpmI CTGGAG 1 cut(s) 1020
BpuEI CTTGAG 2 cut(s) 584, 680
Bsa29I ATCGAT 1 cut(s) 42
BsaAI YACGTR 1 cut(s) 674
BsaI GGTCTC 1 cut(s) 851
BsaJI CCNNGG 5 cut(s) 54, 96, 370, 1152, 1345
BsaXI ACNNNNNCTCC 2 cut(s) 1389, 1419
Bsc4I CCNNNNNNNGG 5 cut(s) 90, 687, 1053, 1152, 1394
Bse1I ACTGG 2 cut(s) 122, 861
Bse21I CCTNAGG 1 cut(s) 1022
Bse3DI GCAATG 1 cut(s) 723
BseBI CCWGG 3 cut(s) 609, 1153, 1347
BseCI ATCGAT 1 cut(s) 42
BseDI CCNNGG 5 cut(s) 54, 96, 370, 1152, 1345
BseGI GGATG 1 cut(s) 1075
BseLI CCNNNNNNNGG 5 cut(s) 90, 687, 1053, 1152, 1394
BseMI GCAATG 1 cut(s) 723
BseMII CTCAG 4 cut(s) 189, 253, 408, 1036
BseNI ACTGG 2 cut(s) 122, 861
BseXI GCAGC 2 cut(s) 537, 540
Bsh1236I CGCG 1 cut(s) 346
BshFI GGCC 4 cut(s) 94, 309, 978, 1272
BshVI ATCGAT 1 cut(s) 42
BsiHKCI CYCGRG 2 cut(s) 192, 1145
BslFI GGGAC 3 cut(s) 1003, 1170, 1266
BslI CCNNNNNNNGG 5 cut(s) 90, 687, 1053, 1152, 1394
BsmAI GTCTC 3 cut(s) 67, 413, 851
BsmBI CGTCTC 1 cut(s) 413
BsmFI GGGAC 3 cut(s) 1003, 1170, 1266
BsnI GGCC 4 cut(s) 94, 309, 978, 1272
Bso31I GGTCTC 1 cut(s) 851
BsoBI CYCGRG 2 cut(s) 192, 1145
Bsp1286I GDGCHC 1 cut(s) 1146
Bsp143I GATC 3 cut(s) 690, 1005, 1113
Bsp19I CCATGG 1 cut(s) 370
Bsp68I TCGCGA 1 cut(s) 346
BspANI GGCC 4 cut(s) 94, 309, 978, 1272
BspCNI CTCAG 4 cut(s) 190, 252, 409, 1035
BspDI ATCGAT 1 cut(s) 42
BspFNI CGCG 1 cut(s) 346
BspHI TCATGA 2 cut(s) 693, 778
BspLI GGNNCC 1 cut(s) 1254
BspOI GCTAGC 1 cut(s) 356
BspPI GGATC 1 cut(s) 698
BspTNI GGTCTC 1 cut(s) 851
BsrDI GCAATG 1 cut(s) 723
BsrI ACTGG 2 cut(s) 122, 861
BssECI CCNNGG 5 cut(s) 54, 96, 370, 1152, 1345
BssMI GATC 3 cut(s) 690, 1005, 1113
BssT1I CCWWGG 3 cut(s) 54, 96, 370
Bst2UI CCWGG 3 cut(s) 609, 1153, 1347
Bst4CI ACNGT 2 cut(s) 1048, 1422
Bst6I CTCTTC 1 cut(s) 726
BstBAI YACGTR 1 cut(s) 674
BstC8I GCNNGC 3 cut(s) 92, 354, 620
BstDEI CTNAG 4 cut(s) 198, 239, 417, 1022
BstDSI CCRYGG 1 cut(s) 370
BstF5I GGATG 1 cut(s) 1075
BstFNI CGCG 1 cut(s) 346
BstH2I RGCGCY 1 cut(s) 1133
BstHHI GCGC 1 cut(s) 1132
BstKTI GATC 3 cut(s) 693, 1008, 1116
BstMAI GTCTC 3 cut(s) 67, 413, 851
BstMBI GATC 3 cut(s) 690, 1005, 1113
BstMWI GCNNNNNNNGC 4 cut(s) 362, 515, 1301, 1369
BstNI CCWGG 3 cut(s) 609, 1153, 1347
BstNSI RCATGY 3 cut(s) 73, 1363, 1376
BstSCI CCNGG 3 cut(s) 607, 1151, 1345
BstUI CGCG 1 cut(s) 346
BstV1I GCAGC 2 cut(s) 537, 540
BstV2I GAAGAC 1 cut(s) 714
Bsu15I ATCGAT 1 cut(s) 42
Bsu36I CCTNAGG 1 cut(s) 1022
BsuRI GGCC 4 cut(s) 94, 309, 978, 1272
BsuTUI ATCGAT 1 cut(s) 42
BtgI CCRYGG 1 cut(s) 370
BtgZI GCGATG 2 cut(s) 651, 1210
BtsCI GGATG 1 cut(s) 1075
BtsIMutI CAGTG 3 cut(s) 185, 813, 1418
BtuMI TCGCGA 1 cut(s) 346
Cac8I GCNNGC 3 cut(s) 92, 354, 620
CaiI CAGNNNCTG 1 cut(s) 964
CciI TCATGA 2 cut(s) 693, 778
CfoI GCGC 1 cut(s) 1132
Cfr13I GGNCC 4 cut(s) 23, 93, 150, 1253
ClaI ATCGAT 1 cut(s) 42
CseI GACGC 1 cut(s) 1172
DdeI CTNAG 4 cut(s) 198, 239, 417, 1022
DpnI GATC 3 cut(s) 692, 1007, 1115
DpnII GATC 3 cut(s) 690, 1005, 1113
DraI TTTAAA 1 cut(s) 768
Eam1104I CTCTTC 1 cut(s) 726
EarI CTCTTC 1 cut(s) 726
Eco130I CCWWGG 3 cut(s) 54, 96, 370
Eco24I GRGCYC 1 cut(s) 1146
Eco31I GGTCTC 1 cut(s) 851
Eco32I GATATC 1 cut(s) 643
Eco47I GGWCC 3 cut(s) 23, 150, 1253
Eco57I CTGAAG 4 cut(s) 161, 480, 598, 986
Eco81I CCTNAGG 1 cut(s) 1022
Eco88I CYCGRG 2 cut(s) 192, 1145
EcoO109I RGGNCCY 3 cut(s) 23, 93, 1253
EcoRII CCWGG 3 cut(s) 607, 1151, 1345
EcoRV GATATC 1 cut(s) 643
EcoT14I CCWWGG 3 cut(s) 54, 96, 370
EcoT22I ATGCAT 1 cut(s) 148
EcoT38I GRGCYC 1 cut(s) 1146
ErhI CCWWGG 3 cut(s) 54, 96, 370
Esp3I CGTCTC 1 cut(s) 413
FaqI GGGAC 3 cut(s) 1003, 1170, 1266
FbaI TGATCA 1 cut(s) 1113
Fnu4HI GCNGC 2 cut(s) 526, 529
FokI GGATG 1 cut(s) 1082
FriOI GRGCYC 1 cut(s) 1146
Fsp4HI GCNGC 2 cut(s) 526, 529
FspBI CTAG 6 cut(s) 353, 411, 428, 510, 1079, 1257
GlaI GCGC 1 cut(s) 1131
GluI GCNGC 2 cut(s) 526, 529
GsuI CTGGAG 1 cut(s) 1020
HaeII RGCGCY 1 cut(s) 1133
HaeIII GGCC 4 cut(s) 94, 309, 978, 1272
HgaI GACGC 1 cut(s) 1172
HhaI GCGC 1 cut(s) 1132
Hin6I GCGC 1 cut(s) 1130
HinP1I GCGC 1 cut(s) 1130
HincII GTYRAC 1 cut(s) 492
HindII GTYRAC 1 cut(s) 492
HindIII AAGCTT 3 cut(s) 574, 620, 1209
HpaI GTTAAC 1 cut(s) 492
HphI GGTGA 3 cut(s) 220, 338, 1127
Hpy166II GTNNAC 4 cut(s) 492, 761, 811, 1357
Hpy188I TCNGA 8 cut(s) 20, 264, 278, 499, 652, 798, 966, 1195
Hpy188III TCNNGA 4 cut(s) 345, 398, 694, 779
Hpy8I GTNNAC 4 cut(s) 492, 761, 811, 1357
HpyAV CCTTC 5 cut(s) 317, 320, 376, 446, 533
HpyCH4III ACNGT 2 cut(s) 1048, 1422
HpyCH4IV ACGT 1 cut(s) 673
HpyCH4V TGCA 5 cut(s) 75, 146, 228, 287, 831
HpyF10VI GCNNNNNNNGC 4 cut(s) 362, 515, 1301, 1369
HpyF3I CTNAG 4 cut(s) 198, 239, 417, 1022
HpySE526I ACGT 1 cut(s) 673
HspAI GCGC 1 cut(s) 1130
Ksp22I TGATCA 1 cut(s) 1113
KspAI GTTAAC 1 cut(s) 492
Kzo9I GATC 3 cut(s) 690, 1005, 1113
Lsp1109I GCAGC 2 cut(s) 537, 540
LweI GCATC 1 cut(s) 414
MaeI CTAG 6 cut(s) 353, 411, 428, 510, 1079, 1257
MaeII ACGT 1 cut(s) 673
MaeIII GTNAC 5 cut(s) 208, 674, 1042, 1048, 1375
MalI GATC 3 cut(s) 692, 1007, 1115
MboI GATC 3 cut(s) 690, 1005, 1113
MhlI GDGCHC 1 cut(s) 1146
MluCI AATT 6 cut(s) 169, 317, 479, 569, 944, 1260
MlyI GAGTC 4 cut(s) 671, 955, 1025, 1157
MmeI TCCRAC 2 cut(s) 90, 829
MnlI CCTC 8 cut(s) 14, 36, 144, 426, 792, 1031, 1097, 1283
Mph1103I ATGCAT 1 cut(s) 148
MseI TTAA 6 cut(s) 383, 491, 572, 767, 1011, 1367
MslI CAYNNNNRTG 2 cut(s) 141, 1001
MspA1I CMGCKG 1 cut(s) 1040
MspR9I CCNGG 3 cut(s) 609, 1153, 1347
MvaI CCWGG 3 cut(s) 609, 1153, 1347
MvnI CGCG 1 cut(s) 346
MwoI GCNNNNNNNGC 4 cut(s) 362, 515, 1301, 1369
NcoI CCATGG 1 cut(s) 370
NdeII GATC 3 cut(s) 690, 1005, 1113
NheI GCTAGC 1 cut(s) 352
NlaIV GGNNCC 1 cut(s) 1254
NmeAIII GCCGAG 1 cut(s) 244
NmuCI GTSAC 4 cut(s) 208, 674, 1048, 1375
NruI TCGCGA 1 cut(s) 346
NsiI ATGCAT 1 cut(s) 148
NspI RCATGY 3 cut(s) 73, 1363, 1376
PagI TCATGA 2 cut(s) 693, 778
PciI ACATGT 1 cut(s) 69
PfeI GAWTC 6 cut(s) 15, 255, 394, 647, 1188, 1315
PflMI CCANNNNNTGG 1 cut(s) 1394
PkrI GCNGC 2 cut(s) 527, 530
PleI GAGTC 4 cut(s) 671, 955, 1024, 1156
PpsI GAGTC 4 cut(s) 671, 955, 1024, 1156
Ppu21I YACGTR 1 cut(s) 674
PpuMI RGGWCCY 2 cut(s) 23, 1253
PscI ACATGT 1 cut(s) 69
Psp5II RGGWCCY 2 cut(s) 23, 1253
Psp6I CCWGG 3 cut(s) 607, 1151, 1345
PspGI CCWGG 3 cut(s) 607, 1151, 1345
PspN4I GGNNCC 1 cut(s) 1254
PspPI GGNCC 4 cut(s) 23, 93, 150, 1253
PspPPI RGGWCCY 2 cut(s) 23, 1253
PstNI CAGNNNCTG 1 cut(s) 964
PvuII CAGCTG 1 cut(s) 1040
RruI TCGCGA 1 cut(s) 346
RseI CAYNNNNRTG 2 cut(s) 141, 1001
SaqAI TTAA 6 cut(s) 383, 491, 572, 767, 1011, 1367
SatI GCNGC 2 cut(s) 526, 529
Sau3AI GATC 3 cut(s) 690, 1005, 1113
Sau96I GGNCC 4 cut(s) 23, 93, 150, 1253
SchI GAGTC 4 cut(s) 671, 955, 1025, 1157
ScrFI CCNGG 3 cut(s) 609, 1153, 1347
SduI GDGCHC 1 cut(s) 1146
SfaNI GCATC 1 cut(s) 414
SinI GGWCC 3 cut(s) 23, 150, 1253
SmiMI CAYNNNNRTG 2 cut(s) 141, 1001
SmlI CTYRAG 2 cut(s) 599, 659
SmoI CTYRAG 2 cut(s) 599, 659
Sse9I AATT 6 cut(s) 169, 317, 479, 569, 944, 1260
SspMI CTAG 6 cut(s) 353, 411, 428, 510, 1079, 1257
StyD4I CCNGG 3 cut(s) 607, 1151, 1345
StyI CCWWGG 3 cut(s) 54, 96, 370
TaaI ACNGT 2 cut(s) 1048, 1422
TaiI ACGT 1 cut(s) 676
TaqI TCGA 2 cut(s) 42, 645
TasI AATT 6 cut(s) 169, 317, 479, 569, 944, 1260
TfiI GAWTC 6 cut(s) 15, 255, 394, 647, 1188, 1315
Tru1I TTAA 6 cut(s) 383, 491, 572, 767, 1011, 1367
Tru9I TTAA 6 cut(s) 383, 491, 572, 767, 1011, 1367
TscAI CASTG 3 cut(s) 185, 813, 1425
TseFI GTSAC 4 cut(s) 208, 674, 1048, 1375
TseI GCWGC 2 cut(s) 525, 528
Tsp45I GTSAC 4 cut(s) 208, 674, 1048, 1375
TspDTI ATGAA 7 cut(s) 131, 462, 489, 581, 710, 734, 867
TspGWI ACGGA 2 cut(s) 227, 1212
TspRI CASTG 3 cut(s) 185, 813, 1425
Van91I CCANNNNNTGG 1 cut(s) 1394
VpaK11BI GGWCC 3 cut(s) 23, 150, 1253
XapI RAATTY 2 cut(s) 479, 1260
XceI RCATGY 3 cut(s) 73, 1363, 1376
XcmI CCANNNNNNNNNTGG 1 cut(s) 368
XspI CTAG 6 cut(s) 353, 411, 428, 510, 1079, 1257
Zsp2I ATGCAT 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.