pycom13g05200

Cytochrome p450

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
3468795 .. 3471161
2367 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g05200.2

Sequence Viewer

Length: 792 bp
ATGATGAATGCTTTGGGAGGACAATTAGTCATTCTTCCAAGCTTTCTGTGTGTGTTCCTTGTCTTACTCCTCATCAAGATCTTTCATAAGCTATGGTGGACTCCGACTCGATTACAGAAGCTGATGGCTTTGCAGGGGATCACAGGCCCTCCTTACAGACTTATCCATGGAAACACGAAAGAAATCACCGACATGATCAAGGAAGCAATGAGCAGGCCGAAAAATTTATCACACGACGTATTTTCTGTAGTTCAACCTCACATTCACTCTTGGACTCAGATATACGGTAAGAATTATCTTCAATGGCATGGCTCTAAGGCTCAGTTGATCGTTACGGACCCTGAATTGTGCAAAGAGATATTGAACAACAAAGATAGAGCTTATCCGAAAATAGAGACCCCTTACTTTGAGAAGAAGCTATTCGGAGATGGCCTTCTGACAACAACTAAAGCTGAAAAATGGGCGAAATTGCGAAAGCTGGCTACCCATGCTTTCCATGGAGAGAGCTTAAAAAGTATGACTCCAGCAATGGTAGCTAGTACTGAGACAATGCTGGAGAAGTGGAAAAGTTATGAAGGAAAAGAGATTGAGGTGTTTCAAGAGTTTAGGTTGTTCAGTTCGGAAGTGATCTCCAGAACAGCATTCGGCAGCAATTATATCGAAGGAAAGAACATTTTCGAGATGCTGGCGAAGTTAGGCGTCTTAGTGTTCAAAAATTCTCTCACAATCAGGGTTCCCGTAATCAGTAAGTTTTTCAAAACCAGTGATGATCGATCGAAGCAGACAAGCTAG

Protein Analysis

264

Amino Acids

30.2

Weight (kDa)

9.58

Isoelectric Point (pI)

34.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 146
AcsI RAATTY 2 cut(s) 223, 715
AcyI GRCGYC 1 cut(s) 699
AfaI GTAC 1 cut(s) 541
AgsI TTSAA 6 cut(s) 254, 302, 364, 599, 712, 757
AhdI GACNNNNNGTC 1 cut(s) 26
Alw26I GTCTC 2 cut(s) 389, 539
AlwI GGATC 1 cut(s) 146
AlwNI CAGNNNCTG 1 cut(s) 121
AoxI GGCC 3 cut(s) 145, 215, 430
ApeKI GCWGC 1 cut(s) 648
ApoI RAATTY 2 cut(s) 223, 715
Asp700I GAANNNNTTC 2 cut(s) 419, 674
AspS9I GGNCC 2 cut(s) 146, 337
AsuHPI GGTGA 1 cut(s) 178
AvaII GGWCC 1 cut(s) 337
BbvI GCAGC 1 cut(s) 660
BccI CCATC 2 cut(s) 118, 422
BcgI CGANNNNNNTGC 2 cut(s) 640, 674
BclI TGATCA 1 cut(s) 195
BcoDI GTCTC 2 cut(s) 389, 539
BfaI CTAG 2 cut(s) 537, 790
BfmI CTRYAG 1 cut(s) 246
BglII AGATCT 1 cut(s) 78
BisI GCNGC 1 cut(s) 649
BlsI GCNGC 1 cut(s) 650
BmcAI AGTACT 1 cut(s) 541
Bme18I GGWCC 1 cut(s) 337
BmeRI GACNNNNNGTC 1 cut(s) 26
BmgT120I GGNCC 2 cut(s) 146, 337
BmiI GGNNCC 2 cut(s) 339, 735
BmsI GCATC 1 cut(s) 672
BpmI CTGGAG 3 cut(s) 507, 575, 616
Bsa29I ATCGAT 1 cut(s) 772
BsaHI GRCGYC 1 cut(s) 699
BsaI GGTCTC 1 cut(s) 389
BsaJI CCNNGG 2 cut(s) 166, 496
BsaXI ACNNNNNCTCC 2 cut(s) 133, 163
Bse1I ACTGG 1 cut(s) 762
Bse3DI GCAATG 2 cut(s) 213, 534
BseCI ATCGAT 1 cut(s) 772
BseDI CCNNGG 2 cut(s) 166, 496
BseMI GCAATG 2 cut(s) 213, 534
BseMII CTCAG 3 cut(s) 290, 335, 534
BseNI ACTGG 1 cut(s) 762
BseRI GAGGAG 1 cut(s) 59
BseXI GCAGC 1 cut(s) 660
Bsh1285I CGRYCG 1 cut(s) 776
BshFI GGCC 3 cut(s) 147, 217, 432
BshVI ATCGAT 1 cut(s) 772
BsiEI CGRYCG 1 cut(s) 776
BsmAI GTCTC 2 cut(s) 389, 539
BsmI GAATGC 2 cut(s) 13, 641
BsnI GGCC 3 cut(s) 147, 217, 432
Bso31I GGTCTC 1 cut(s) 389
Bsp143I GATC 7 cut(s) 78, 138, 195, 327, 627, 769, 773
Bsp19I CCATGG 2 cut(s) 166, 496
BspANI GGCC 3 cut(s) 147, 217, 432
BspCNI CTCAG 3 cut(s) 289, 334, 535
BspDI ATCGAT 1 cut(s) 772
BspLI GGNNCC 2 cut(s) 339, 735
BspPI GGATC 1 cut(s) 146
BspTNI GGTCTC 1 cut(s) 389
BsrDI GCAATG 2 cut(s) 213, 534
BsrI ACTGG 1 cut(s) 762
BssECI CCNNGG 2 cut(s) 166, 496
BssMI GATC 7 cut(s) 78, 138, 195, 327, 627, 769, 773
BssNI GRCGYC 1 cut(s) 699
BssT1I CCWWGG 2 cut(s) 166, 496
Bst4CI ACNGT 1 cut(s) 287
BstACI GRCGYC 1 cut(s) 699
BstC8I GCNNGC 3 cut(s) 215, 480, 687
BstDEI CTNAG 5 cut(s) 276, 315, 321, 543, 703
BstDSI CCRYGG 2 cut(s) 166, 496
BstKTI GATC 7 cut(s) 81, 141, 198, 330, 630, 772, 776
BstMAI GTCTC 2 cut(s) 389, 539
BstMBI GATC 7 cut(s) 78, 138, 195, 327, 627, 769, 773
BstMCI CGRYCG 1 cut(s) 776
BstMWI GCNNNNNNNGC 2 cut(s) 488, 533
BstSFI CTRYAG 1 cut(s) 246
BstV1I GCAGC 1 cut(s) 660
BstX2I RGATCY 1 cut(s) 78
BstYI RGATCY 1 cut(s) 78
Bsu15I ATCGAT 1 cut(s) 772
BsuRI GGCC 3 cut(s) 147, 217, 432
BsuTUI ATCGAT 1 cut(s) 772
BtgI CCRYGG 2 cut(s) 166, 496
BtsIMutI CAGTG 1 cut(s) 769
Cac8I GCNNGC 3 cut(s) 215, 480, 687
CaiI CAGNNNCTG 1 cut(s) 121
Cfr13I GGNCC 2 cut(s) 146, 337
ClaI ATCGAT 1 cut(s) 772
CseI GACGC 1 cut(s) 688
Csp6I GTAC 1 cut(s) 540
CviAII CATG 5 cut(s) 167, 193, 308, 488, 497
CviQI GTAC 1 cut(s) 540
DdeI CTNAG 5 cut(s) 276, 315, 321, 543, 703
DpnI GATC 7 cut(s) 80, 140, 197, 329, 629, 771, 775
DpnII GATC 7 cut(s) 78, 138, 195, 327, 627, 769, 773
DriI GACNNNNNGTC 1 cut(s) 26
Eam1105I GACNNNNNGTC 1 cut(s) 26
Eco130I CCWWGG 2 cut(s) 166, 496
Eco31I GGTCTC 1 cut(s) 389
Eco47I GGWCC 1 cut(s) 337
EcoO109I RGGNCCY 1 cut(s) 146
EcoT14I CCWWGG 2 cut(s) 166, 496
ErhI CCWWGG 2 cut(s) 166, 496
FaeI CATG 5 cut(s) 170, 196, 311, 491, 500
FatI CATG 5 cut(s) 166, 192, 307, 487, 496
FbaI TGATCA 1 cut(s) 195
Fnu4HI GCNGC 1 cut(s) 649
Fsp4HI GCNGC 1 cut(s) 649
FspBI CTAG 2 cut(s) 537, 790
GluI GCNGC 1 cut(s) 649
GsuI CTGGAG 3 cut(s) 507, 575, 616
HaeIII GGCC 3 cut(s) 147, 217, 432
HgaI GACGC 1 cut(s) 688
Hin1I GRCGYC 1 cut(s) 699
Hin1II CATG 5 cut(s) 170, 196, 311, 491, 500
HindIII AAGCTT 1 cut(s) 40
HinfI GANTC 4 cut(s) 100, 106, 274, 520
HphI GGTGA 1 cut(s) 178
Hpy166II GTNNAC 1 cut(s) 99
Hpy188I TCNGA 6 cut(s) 105, 279, 387, 425, 438, 622
Hpy188III TCNNGA 4 cut(s) 76, 599, 633, 679
Hpy8I GTNNAC 1 cut(s) 99
Hpy99I CGWCG 1 cut(s) 239
HpyAV CCTTC 3 cut(s) 443, 569, 656
HpyCH4III ACNGT 1 cut(s) 287
HpyCH4IV ACGT 1 cut(s) 237
HpyCH4V TGCA 2 cut(s) 133, 351
HpyF10VI GCNNNNNNNGC 2 cut(s) 488, 533
HpyF3I CTNAG 5 cut(s) 276, 315, 321, 543, 703
HpySE526I ACGT 1 cut(s) 237
Hsp92I GRCGYC 1 cut(s) 699
Hsp92II CATG 5 cut(s) 170, 196, 311, 491, 500
Ksp22I TGATCA 1 cut(s) 195
Kzo9I GATC 7 cut(s) 78, 138, 195, 327, 627, 769, 773
Lsp1109I GCAGC 1 cut(s) 660
LweI GCATC 1 cut(s) 672
MaeI CTAG 2 cut(s) 537, 790
MaeII ACGT 1 cut(s) 237
MaeIII GTNAC 1 cut(s) 331
MalI GATC 7 cut(s) 80, 140, 197, 329, 629, 771, 775
MboI GATC 7 cut(s) 78, 138, 195, 327, 627, 769, 773
MboII GAAGA 3 cut(s) 26, 290, 424
MflI RGATCY 1 cut(s) 78
MluCI AATT 7 cut(s) 23, 223, 292, 344, 467, 652, 715
MlyI GAGTC 4 cut(s) 94, 100, 268, 514
MmeI TCCRAC 1 cut(s) 128
MnlI CCTC 5 cut(s) 11, 80, 159, 267, 583
MroXI GAANNNNTTC 2 cut(s) 419, 674
MseI TTAA 1 cut(s) 509
MslI CAYNNNNRTG 1 cut(s) 191
Mva1269I GAATGC 2 cut(s) 13, 641
MwoI GCNNNNNNNGC 2 cut(s) 488, 533
NcoI CCATGG 2 cut(s) 166, 496
NdeII GATC 7 cut(s) 78, 138, 195, 327, 627, 769, 773
NlaIII CATG 5 cut(s) 170, 196, 311, 491, 500
NlaIV GGNNCC 2 cut(s) 339, 735
PctI GAATGC 2 cut(s) 13, 641
PdmI GAANNNNTTC 2 cut(s) 419, 674
PkrI GCNGC 1 cut(s) 650
Ple19I CGATCG 1 cut(s) 776
PleI GAGTC 4 cut(s) 94, 100, 268, 514
PpsI GAGTC 4 cut(s) 94, 100, 268, 514
PspN4I GGNNCC 2 cut(s) 339, 735
PspPI GGNCC 2 cut(s) 146, 337
PstNI CAGNNNCTG 1 cut(s) 121
PsuI RGATCY 1 cut(s) 78
PvuI CGATCG 1 cut(s) 776
RsaI GTAC 1 cut(s) 541
RsaNI GTAC 1 cut(s) 540
RseI CAYNNNNRTG 1 cut(s) 191
SaqAI TTAA 1 cut(s) 509
SatI GCNGC 1 cut(s) 649
Sau3AI GATC 7 cut(s) 78, 138, 195, 327, 627, 769, 773
Sau96I GGNCC 2 cut(s) 146, 337
ScaI AGTACT 1 cut(s) 541
SchI GAGTC 4 cut(s) 94, 100, 268, 514
SfaNI GCATC 1 cut(s) 672
SfcI CTRYAG 1 cut(s) 246
SinI GGWCC 1 cut(s) 337
SmiMI CAYNNNNRTG 1 cut(s) 191
Sse9I AATT 7 cut(s) 23, 223, 292, 344, 467, 652, 715
SspMI CTAG 2 cut(s) 537, 790
StyI CCWWGG 2 cut(s) 166, 496
TaaI ACNGT 1 cut(s) 287
TaiI ACGT 1 cut(s) 240
TaqI TCGA 5 cut(s) 109, 660, 678, 772, 776
TasI AATT 7 cut(s) 23, 223, 292, 344, 467, 652, 715
TatI WGTACW 1 cut(s) 539
Tru1I TTAA 1 cut(s) 509
Tru9I TTAA 1 cut(s) 509
TscAI CASTG 1 cut(s) 769
TseI GCWGC 1 cut(s) 648
TspDTI ATGAA 3 cut(s) 20, 74, 588
TspGWI ACGGA 1 cut(s) 350
TspRI CASTG 1 cut(s) 769
VpaK11BI GGWCC 1 cut(s) 337
XapI RAATTY 2 cut(s) 223, 715
XcmI CCANNNNNNNNNTGG 1 cut(s) 494
XmnI GAANNNNTTC 2 cut(s) 419, 674
XspI CTAG 2 cut(s) 537, 790
ZrmI AGTACT 1 cut(s) 541
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.