MD00G1065200.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
12510020 .. 12522363
12344 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1065200.v1.1.491

Sequence Viewer

Length: 474 bp
ATGACTGGAGAAGCAGACGGTTTTGGAAGTGATTATCTTGGAATACTTTTAAAGGCTCGTCATGATGCACACGAGAAGCAGCGGATTTCAGTGGACGATTTAGTCGAAGAGTGCAAGACGTTTTACTTTGCTGGACATGAAACCACTAACTCTTTGCTTGCTTGGACCGTCTTTCTTCTGGCTCTTCATACAGATTGGCAAGGGGAAGCTAGAAAGGAGATGGGTATGATCATCAATGAGTCTCTAAGGTTATATCCTCCTGCTGTGTCCCTTACTAGGGAATCTCTAAAGGAAGTTAGACTAGGACAGGTTGTCGTTCCCGCTAATGTTGAGTTGCACGTCACAAACCTGGCACTTCACCATGAACCTAAATATTGGGGAAAAGACATGCAACTTTTCAAACCGGAGAGATTCTCAAAAGGGGTTGCGAAAGCTACTAACAACAACGCAGTTGCATTCATACTTTACAGGTAG

Protein Analysis

158

Amino Acids

17.81

Weight (kDa)

6.37

Isoelectric Point (pI)

18.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 11 - 74 4.1e-09 Cytochrome P450
p450 PF00067 76 - 143 3.6e-13 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 101
AciI CCGC 2 cut(s) 82, 321
AfiI CCNNNNNNNGG 2 cut(s) 276, 277
AgsI TTSAA 1 cut(s) 400
AhdI GACNNNNNGTC 1 cut(s) 311
AjiI CACGTC 1 cut(s) 340
AjnI CCWGG 1 cut(s) 348
AluBI AGCT 2 cut(s) 209, 434
AluI AGCT 2 cut(s) 209, 434
Alw26I GTCTC 1 cut(s) 246
ApeKI GCWGC 1 cut(s) 79
AspS9I GGNCC 1 cut(s) 165
AsuHPI GGTGA 1 cut(s) 350
AvaII GGWCC 1 cut(s) 165
BauI CACGAG 1 cut(s) 71
BbvI GCAGC 1 cut(s) 91
BccI CCATC 1 cut(s) 214
BciT130I CCWGG 1 cut(s) 350
BclI TGATCA 1 cut(s) 228
BcoDI GTCTC 1 cut(s) 246
BfaI CTAG 3 cut(s) 210, 276, 302
BisI GCNGC 1 cut(s) 80
BlsI GCNGC 1 cut(s) 81
Bme1390I CCNGG 1 cut(s) 350
Bme18I GGWCC 1 cut(s) 165
BmeRI GACNNNNNGTC 1 cut(s) 311
BmgBI CACGTC 1 cut(s) 340
BmgT120I GGNCC 1 cut(s) 165
BmrFI CCNGG 1 cut(s) 350
BmsI GCATC 1 cut(s) 55
BplI GAGNNNNNCTC 2 cut(s) 398, 430
BpmI CTGGAG 1 cut(s) 27
BsaWI WCCGGW 1 cut(s) 403
Bsc4I CCNNNNNNNGG 2 cut(s) 276, 277
Bse1I ACTGG 1 cut(s) 10
BseBI CCWGG 1 cut(s) 350
BseLI CCNNNNNNNGG 2 cut(s) 276, 277
BseNI ACTGG 1 cut(s) 10
BseXI GCAGC 1 cut(s) 91
BsiSI CCGG 1 cut(s) 404
BslFI GGGAC 1 cut(s) 253
BslI CCNNNNNNNGG 2 cut(s) 276, 277
BsmAI GTCTC 1 cut(s) 246
BsmFI GGGAC 1 cut(s) 253
BsmI GAATGC 1 cut(s) 455
Bsp143I GATC 1 cut(s) 228
BspACI CCGC 2 cut(s) 82, 321
BspHI TCATGA 1 cut(s) 61
BspQI GCTCTTC 1 cut(s) 189
BsrI ACTGG 1 cut(s) 10
BssMI GATC 1 cut(s) 228
BssSI CACGAG 1 cut(s) 71
Bst2BI CACGAG 1 cut(s) 71
Bst2UI CCWGG 1 cut(s) 350
Bst4CI ACNGT 2 cut(s) 20, 169
Bst6I CTCTTC 2 cut(s) 102, 189
BstC8I GCNNGC 1 cut(s) 159
BstDEI CTNAG 1 cut(s) 245
BstKTI GATC 1 cut(s) 231
BstMAI GTCTC 1 cut(s) 246
BstMBI GATC 1 cut(s) 228
BstNI CCWGG 1 cut(s) 350
BstNSI RCATGY 1 cut(s) 391
BstSCI CCNGG 1 cut(s) 348
BstV1I GCAGC 1 cut(s) 91
BtrI CACGTC 1 cut(s) 340
BtsIMutI CAGTG 1 cut(s) 96
Cac8I GCNNGC 1 cut(s) 159
CciI TCATGA 1 cut(s) 61
Cfr13I GGNCC 1 cut(s) 165
CviAII CATG 4 cut(s) 62, 137, 362, 388
CviJI RGCY 4 cut(s) 56, 182, 209, 434
CviKI_1 RGCY 4 cut(s) 56, 182, 209, 434
DdeI CTNAG 1 cut(s) 245
DpnI GATC 1 cut(s) 230
DpnII GATC 1 cut(s) 228
DraI TTTAAA 1 cut(s) 51
DrdI GACNNNNNNGTC 1 cut(s) 101
DriI GACNNNNNGTC 1 cut(s) 311
DseDI GACNNNNNNGTC 1 cut(s) 101
Eam1104I CTCTTC 2 cut(s) 102, 189
Eam1105I GACNNNNNGTC 1 cut(s) 311
EarI CTCTTC 2 cut(s) 102, 189
Eco47I GGWCC 1 cut(s) 165
EcoRII CCWGG 1 cut(s) 348
FaeI CATG 4 cut(s) 65, 140, 365, 391
FaiI YATR 8 cut(s) 63, 138, 189, 227, 253, 363, 389, 461
FaqI GGGAC 1 cut(s) 253
FatI CATG 4 cut(s) 61, 136, 361, 387
FauI CCCGC 1 cut(s) 328
FbaI TGATCA 1 cut(s) 228
Fnu4HI GCNGC 1 cut(s) 80
Fsp4HI GCNGC 1 cut(s) 80
FspBI CTAG 3 cut(s) 210, 276, 302
GluI GCNGC 1 cut(s) 80
GsuI CTGGAG 1 cut(s) 27
HapII CCGG 1 cut(s) 404
Hin1II CATG 4 cut(s) 65, 140, 365, 391
HinfI GANTC 3 cut(s) 239, 281, 411
HpaII CCGG 1 cut(s) 404
HphI GGTGA 1 cut(s) 350
Hpy166II GTNNAC 1 cut(s) 94
Hpy188III TCNNGA 1 cut(s) 62
Hpy8I GTNNAC 1 cut(s) 94
HpyCH4III ACNGT 2 cut(s) 20, 169
HpyCH4IV ACGT 2 cut(s) 119, 339
HpyCH4V TGCA 5 cut(s) 68, 114, 337, 391, 455
HpyF3I CTNAG 1 cut(s) 245
HpySE526I ACGT 2 cut(s) 119, 339
Hsp92II CATG 4 cut(s) 65, 140, 365, 391
Ksp22I TGATCA 1 cut(s) 228
Kzo9I GATC 1 cut(s) 228
LguI GCTCTTC 1 cut(s) 189
LpnPI CCDG 8 cut(s) 117, 164, 273, 293, 335, 362, 417, 454
Lsp1109I GCAGC 1 cut(s) 91
LweI GCATC 1 cut(s) 55
MaeI CTAG 3 cut(s) 210, 276, 302
MaeII ACGT 2 cut(s) 119, 339
MaeIII GTNAC 1 cut(s) 340
MalI GATC 1 cut(s) 230
MboI GATC 1 cut(s) 228
MboII GAAGA 3 cut(s) 119, 167, 176
MlyI GAGTC 1 cut(s) 248
MnlI CCTC 1 cut(s) 267
MseI TTAA 1 cut(s) 50
MspA1I CMGCKG 1 cut(s) 82
MspI CCGG 1 cut(s) 404
MspR9I CCNGG 1 cut(s) 350
Mva1269I GAATGC 1 cut(s) 455
MvaI CCWGG 1 cut(s) 350
NdeII GATC 1 cut(s) 228
NlaIII CATG 4 cut(s) 65, 140, 365, 391
NmuCI GTSAC 1 cut(s) 340
NspI RCATGY 1 cut(s) 391
PagI TCATGA 1 cut(s) 61
PciSI GCTCTTC 1 cut(s) 189
PcsI WCGNNNNNNNCGW 1 cut(s) 102
PctI GAATGC 1 cut(s) 455
PfeI GAWTC 2 cut(s) 281, 411
PkrI GCNGC 1 cut(s) 81
PleI GAGTC 1 cut(s) 247
PpsI GAGTC 1 cut(s) 247
Psp6I CCWGG 1 cut(s) 348
PspGI CCWGG 1 cut(s) 348
PspPI GGNCC 1 cut(s) 165
SapI GCTCTTC 1 cut(s) 189
SaqAI TTAA 1 cut(s) 50
SatI GCNGC 1 cut(s) 80
Sau3AI GATC 1 cut(s) 228
Sau96I GGNCC 1 cut(s) 165
SchI GAGTC 1 cut(s) 248
ScrFI CCNGG 1 cut(s) 350
SetI ASST 9 cut(s) 122, 211, 251, 312, 342, 351, 370, 436, 473
SfaNI GCATC 1 cut(s) 55
SinI GGWCC 1 cut(s) 165
SsiI CCGC 2 cut(s) 82, 321
SspI AATATT 1 cut(s) 374
SspMI CTAG 3 cut(s) 210, 276, 302
StyD4I CCNGG 1 cut(s) 348
TaaI ACNGT 2 cut(s) 20, 169
TaiI ACGT 2 cut(s) 122, 342
TaqI TCGA 1 cut(s) 105
TfiI GAWTC 2 cut(s) 281, 411
Tru1I TTAA 1 cut(s) 50
Tru9I TTAA 1 cut(s) 50
TscAI CASTG 1 cut(s) 96
TseFI GTSAC 1 cut(s) 340
TseI GCWGC 1 cut(s) 79
Tsp45I GTSAC 1 cut(s) 340
TspDTI ATGAA 4 cut(s) 153, 176, 378, 448
TspRI CASTG 1 cut(s) 96
VpaK11BI GGWCC 1 cut(s) 165
XceI RCATGY 1 cut(s) 391
XspI CTAG 3 cut(s) 210, 276, 302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.