Rh2AG222400

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
23536670 .. 23537675
1006 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG222400.1

Sequence Viewer

Length: 390 bp
ATGGCTTCACAGGGAATCAAAGGTCCTCCTTATAGACTCATCCATAGAAACACCAAAGAAATCGCCAACATGTACAAGGAAGCCATGAGCAAGCCCTTATATTTGTCGCACGACATATTACCTGTAGTTTTACCTCATGTTCATGCATGGACCAACATCTATGGGAAGAATTATCTCCAGTGGCATGGTACTCAAGTTCCATGTATAACGATCGTGATGGAAGCTGAATTGTGCAAGGAGATATTCAATAATAAAGATGGAGCTTATCCAAAACCCACGTTCCAAGTTCCAAGGATACTAATTGGGAATGGCCTTCCGGCATTAGAAGGTGAGAAATGGGCAAAATCGCGAAGGTTGGCTAACCATGCCTTCCATGGAGATAGCTTATAA

Protein Analysis

129

Amino Acids

14.65

Weight (kDa)

9.3

Isoelectric Point (pI)

37.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 388
AccII CGCG 1 cut(s) 349
AfaI GTAC 2 cut(s) 74, 190
AflIII ACRYGT 1 cut(s) 69
AgsI TTSAA 1 cut(s) 247
AluBI AGCT 3 cut(s) 224, 263, 384
AluI AGCT 3 cut(s) 224, 263, 384
AoxI GGCC 1 cut(s) 310
AspS9I GGNCC 2 cut(s) 23, 150
AsuHPI GGTGA 1 cut(s) 341
AvaII GGWCC 2 cut(s) 23, 150
BaeI ACNNNNGTAYC 2 cut(s) 180, 213
BccI CCATC 2 cut(s) 211, 251
BciVI GTATCC 1 cut(s) 288
BfmI CTRYAG 1 cut(s) 123
BfuI GTATCC 1 cut(s) 288
Bme18I GGWCC 2 cut(s) 23, 150
BmgT120I GGNCC 2 cut(s) 23, 150
BpmI CTGGAG 1 cut(s) 161
BpuEI CTTGAG 1 cut(s) 177
BsaJI CCNNGG 2 cut(s) 290, 373
Bse1I ACTGG 1 cut(s) 178
BseDI CCNNGG 2 cut(s) 290, 373
BseGI GGATG 1 cut(s) 39
BseNI ACTGG 1 cut(s) 178
Bsh1236I CGCG 1 cut(s) 349
Bsh1285I CGRYCG 1 cut(s) 213
BshFI GGCC 1 cut(s) 312
BsiEI CGRYCG 1 cut(s) 213
BsiSI CCGG 1 cut(s) 317
BsnI GGCC 1 cut(s) 312
Bsp1407I TGTACA 1 cut(s) 72
Bsp143I GATC 1 cut(s) 210
Bsp19I CCATGG 1 cut(s) 373
Bsp68I TCGCGA 1 cut(s) 349
BspANI GGCC 1 cut(s) 312
BspFNI CGCG 1 cut(s) 349
BsrGI TGTACA 1 cut(s) 72
BsrI ACTGG 1 cut(s) 178
BssECI CCNNGG 2 cut(s) 290, 373
BssMI GATC 1 cut(s) 210
BssT1I CCWWGG 2 cut(s) 290, 373
BstAUI TGTACA 1 cut(s) 72
BstC8I GCNNGC 1 cut(s) 92
BstDSI CCRYGG 1 cut(s) 373
BstF5I GGATG 1 cut(s) 39
BstFNI CGCG 1 cut(s) 349
BstKTI GATC 1 cut(s) 213
BstMBI GATC 1 cut(s) 210
BstMCI CGRYCG 1 cut(s) 213
BstMWI GCNNNNNNNGC 1 cut(s) 365
BstNSI RCATGY 1 cut(s) 73
BstSFI CTRYAG 1 cut(s) 123
BstUI CGCG 1 cut(s) 349
BstXI CCANNNNNNTGG 1 cut(s) 185
BsuI GTATCC 1 cut(s) 288
BsuRI GGCC 1 cut(s) 312
BtgI CCRYGG 1 cut(s) 373
BtsCI GGATG 1 cut(s) 39
BtsIMutI CAGTG 1 cut(s) 185
BtuMI TCGCGA 1 cut(s) 349
Cac8I GCNNGC 1 cut(s) 92
Cfr13I GGNCC 2 cut(s) 23, 150
Csp6I GTAC 2 cut(s) 73, 189
CviAII CATG 9 cut(s) 70, 85, 137, 143, 147, 185, 201, 365, 374
CviJI RGCY 8 cut(s) 5, 83, 94, 224, 263, 312, 359, 384
CviKI_1 RGCY 8 cut(s) 5, 83, 94, 224, 263, 312, 359, 384
CviQI GTAC 2 cut(s) 73, 189
DpnI GATC 1 cut(s) 212
DpnII GATC 1 cut(s) 210
Eco130I CCWWGG 2 cut(s) 290, 373
Eco47I GGWCC 2 cut(s) 23, 150
EcoO109I RGGNCCY 1 cut(s) 23
EcoT14I CCWWGG 2 cut(s) 290, 373
EcoT22I ATGCAT 1 cut(s) 148
ErhI CCWWGG 2 cut(s) 290, 373
FaeI CATG 9 cut(s) 73, 88, 140, 146, 150, 188, 204, 368, 377
FatI CATG 9 cut(s) 69, 84, 136, 142, 146, 184, 200, 364, 373
FokI GGATG 1 cut(s) 26
GsuI CTGGAG 1 cut(s) 161
HaeIII GGCC 1 cut(s) 312
HapII CCGG 1 cut(s) 317
Hin1II CATG 9 cut(s) 73, 88, 140, 146, 150, 188, 204, 368, 377
HinfI GANTC 2 cut(s) 15, 36
HpaII CCGG 1 cut(s) 317
HphI GGTGA 1 cut(s) 341
Hpy188III TCNNGA 2 cut(s) 214, 348
HpyAV CCTTC 4 cut(s) 320, 323, 345, 379
HpyCH4IV ACGT 1 cut(s) 278
HpyCH4V TGCA 2 cut(s) 146, 234
HpyF10VI GCNNNNNNNGC 1 cut(s) 365
HpySE526I ACGT 1 cut(s) 278
Hsp92II CATG 9 cut(s) 73, 88, 140, 146, 150, 188, 204, 368, 377
Kzo9I GATC 1 cut(s) 210
LmnI GCTCC 1 cut(s) 260
LpnPI CCDG 3 cut(s) 135, 191, 330
MaeII ACGT 1 cut(s) 278
MalI GATC 1 cut(s) 212
MboI GATC 1 cut(s) 210
MboII GAAGA 1 cut(s) 178
MluCI AATT 3 cut(s) 169, 227, 300
MlyI GAGTC 1 cut(s) 30
MnlI CCTC 2 cut(s) 36, 144
Mph1103I ATGCAT 1 cut(s) 148
MslI CAYNNNNRTG 1 cut(s) 141
MspI CCGG 1 cut(s) 317
MvnI CGCG 1 cut(s) 349
MwoI GCNNNNNNNGC 1 cut(s) 365
NcoI CCATGG 1 cut(s) 373
NdeII GATC 1 cut(s) 210
NlaIII CATG 9 cut(s) 73, 88, 140, 146, 150, 188, 204, 368, 377
NruI TCGCGA 1 cut(s) 349
NsiI ATGCAT 1 cut(s) 148
NspI RCATGY 1 cut(s) 73
PciI ACATGT 1 cut(s) 69
PfeI GAWTC 1 cut(s) 15
Ple19I CGATCG 1 cut(s) 213
PleI GAGTC 1 cut(s) 30
PpsI GAGTC 1 cut(s) 30
PpuMI RGGWCCY 1 cut(s) 23
PscI ACATGT 1 cut(s) 69
PsiI TTATAA 1 cut(s) 388
Psp5II RGGWCCY 1 cut(s) 23
PspPI GGNCC 2 cut(s) 23, 150
PspPPI RGGWCCY 1 cut(s) 23
PvuI CGATCG 1 cut(s) 213
RruI TCGCGA 1 cut(s) 349
RsaI GTAC 2 cut(s) 74, 190
RsaNI GTAC 2 cut(s) 73, 189
RseI CAYNNNNRTG 1 cut(s) 141
Sau3AI GATC 1 cut(s) 210
Sau96I GGNCC 2 cut(s) 23, 150
SchI GAGTC 1 cut(s) 30
SetI ASST 9 cut(s) 25, 124, 136, 226, 265, 281, 331, 356, 386
SfcI CTRYAG 1 cut(s) 123
SinI GGWCC 2 cut(s) 23, 150
SmiMI CAYNNNNRTG 1 cut(s) 141
SmlI CTYRAG 1 cut(s) 192
SmoI CTYRAG 1 cut(s) 192
Sse9I AATT 3 cut(s) 169, 227, 300
StyI CCWWGG 2 cut(s) 290, 373
TaiI ACGT 1 cut(s) 281
TasI AATT 3 cut(s) 169, 227, 300
TatI WGTACW 1 cut(s) 72
TfiI GAWTC 1 cut(s) 15
TscAI CASTG 1 cut(s) 185
TspDTI ATGAA 1 cut(s) 131
TspRI CASTG 1 cut(s) 185
VpaK11BI GGWCC 2 cut(s) 23, 150
XceI RCATGY 1 cut(s) 73
XcmI CCANNNNNNNNNTGG 1 cut(s) 371
Zsp2I ATGCAT 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.