Rw4G031230

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000078
Physical Location & Seq
Reverse (-)
58098848 .. 58112731
13884 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G031230.1

Sequence Viewer

Length: 3096 bp
ATGATCAGCTTTAGCCCGGTGATCATCGTTTCAAGCTTTGTTTCTGTGCTCCTTCTCTTAGCTGTCATCAAAATCTTTCACAAACTATGGTGGACTCCAAATCGCATACAGAATCTGATGGCTTTGCAAGGAATCAGAGGCCCTTCTTACAGACTCGTCCATGGGAATTCCAGAGAAATCAACAACATGAGAAAGGAAGCTATGAGCAGACCCAAGAGCTTATCACACAACATATTTCCTGAAGTTCATCCTCATATTCATTCATGGACCAAGACATACGGCAAAACATTTCTTCAGTGGCATGGTGGTAAAGCACAGTTGGTCATTATGGAACCTGAGCTGTGCAAAGAGATACTGAATGGGGCTTTTCCAAAACCGGAGACCAAACGTTTTGTAAAGAAGCTGTTAGGAGATGGCCTCACACGATCCGAAGGTGAAAAATGGGTAAAAATGCGAAAACTGGCTAACCATGCCTTCCATGGAGAGAGCTTGAGGACTATGATTCCGGCGATGATCACTAGCGCTGAGACGATGCTAGAAAGGTGGACAAGTCATAATGGCAAAGAGATTGAGGTGTTTGAAGAGTTTAGACTGTACACTTCAGAAGTGATTTCGAGGACAGCATTTGGAAGCAGCTATATAGAAGGAAAACAGATTTTTGAGATGTTAATAAAGATGGGATTCTTAACATTCAAAAATGCTTTCAACCTCAGGTTTCCTGGCATCAGCAAAATTTATAAGACCAGCGACGAGATTGAATCAGACAAGCTTGAAAAAGGAATAAGGGACTCCATAATAGAAATTGTTAAGAAAAGAGAAGAGAAGGCAATGAGAAGACAAGAAGACTACTTTGGGAGTGATTTTCTTGGTTTACTGCTAAAGGCTTATCATGATCCCAATGAGAGGCAAAGGATTTCGATAGATGATTTAGTTGATGAGTGCAAGGCGTTTTACTTTGCTGGACAAGAAACTAGTACTAGTTTGCTTGCTTGGACTGTCTTTCTTCTGGCTCTCCATACCGATTGGCAAGAAGAAGCAAGAAATGAAGTCCTACAATTATTTGGCAAACAAACACCACATCCTGATGGCTTTTCCAAACTGAAAACAATGAGTATGATCATCAATGAATCTCTAAGGTTATATCCTCCTGTTCTTGCTGTAGAGAGGAGAGTTGAAAAGGAAGTTAGACTGGGAAACCTCGTCATTCCTGCCAATGTTGAATTGCATATTTCAAGTCTAGCACTTCACCATGAGCCTCAATTCTGGGGACAAGATGTGCAACTTTTCAAGCCAGAGCGATTCTCAGAAGGGGTTGCTAAGGCTACTGGGAATAACATAGTCGCATTCTTACCATTTGGAATGGGGCCTCGAACTTGTGTGGGCTTCAACTTTGCCACCGTTGAAGTAAAGATTGCTCTTTCAATGATTCTACAACACTACTCGTTCACCCTTTCACCGGGTTATGTTCACTCTCCCTTTCATTTTCTTACACTTCGTCCACAGCATGGAGTTCAAGTAATCAAAATGAGTTCTATTGGAGACCTAGTGATCACAGTTTCAAGCTTTGTGTTTGTGCTTCTTCTCTTGGCACTCATCAAGATTTTTAACAAGTTATGGTGGACTCCAATTCGCGTTCAAAATTTGATGCTGTTGCAAGGAGTCAAAGGCCCTTCTTATAGATTTATCCATGGAAACACCAAAGAAATCTCCAACTTGAAGAGAGATATTATGAGCAGGTCAATGAGCTTATCGCATGACATATTATCTGCTGTTCAACCTCATATTCACTTATGGACCAGCATATATGGGAAGAATTATCTTCAGTGGCATGGTTCTCAGGCTCAGTTGGTGATTACAGAACCAGAGTTGTGTAGAGAGATACTGAATGACAAAGAAAGAGCTTATCCGAAAATGGAGCCTATACACTTTATCAAGAAGCTCTTTGGAGAAGGCCTTGGCACCAGAACCAAATCCGATGAAAAATGGGCACAATTGCGAAAGATCTCCAACCATGCCTTCCTTGGAGAGAGCTTAAAAAATAAGATTCCAGCAACCATAGATAGTGCTGGGACGATGCTCCAAAGGTGGAAAAACCATGAAGGCAAAGAGATTGAGGTGTATGAAGAATTTAGATTGTTGACTGCAGAAGTGATTTCCAGGACAGCATTTGGCAGCAGCTACTTAGAAGGACAACACATTTTTGAAATGTTGATGAAGTTTTACTTCTTAATATCCAAAAATTTATTCACAATCAGGTTGCCTAGCATCATCAGTAAGGTTTACAAGACCAAAGATGAGACTGAAGCAGAGAAGCTTGACCTAGGAATCCGTGACTCCATAGTGAAGATCATCCAGGAAAGAGAAGCCAAGGCAATGAGGACTGGAGAAGAAGGAAACTTTGGAGATGATTTTCTTGGATTGCTGTTGAAGGCTCATCATGATGCCGATGTTGACCAGAGGATTACGGTAGAGGAATTGATTGATGAGTGCAAAACATTGTACTTTGCAGGACAGGATTCCACTGCCAGTTTACTTGCTTGGACCATCCTTCTTCTAGCACTTCATACTGATTGGCAAGATGAAGCGCGAAAGGAAGTCCTACAAGTATTTGGCAAAAAAAACCTGCCAAATCATGATGGCATTGCCAAACTCAAAACATTGAGTATGATCATTAATGAGTCCTTAAGGTTATATCCTCCTCTTGTTACTGTAAGTGGGAGGACAGCTGATAGAGAGGTTAGATTGGGAAAGCTAACCATTGATCCAGCATCTAATCTTGAACTGCTCATCAAACCTTTATCATTGCACCATGATCCTGACTTCTGGGGACAAGATGTGCATCTCTTCAAACCAGAGCGATTCGCAGACGGGGTTGGTAAAGCTACGAATAATAACCTAGCTGGATTCCTACCCTTCGGAACAGGACGAAGAATGTGTGTGGGCTTCGACTTTGCCACCACTGAAGCAAAGGTTGTTCTGTCAATGATTCTACAGCGCTACTCCTTCACCCTTTCTCCAACTTATGTACACTCGCCCTATGAGGCGCTTACGCTTTGCCCACAACATGGAGTTCAAATAGTGCTACACTCACTTTGA

Protein Analysis

1031

Amino Acids

117.83

Weight (kDa)

8.89

Isoelectric Point (pI)

40.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 82 - 493 5.7e-77 Cytochrome P450
p450 PF00067 602 - 1014 1.3e-67 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 738
Acc36I ACCTGC 2 cut(s) 1725, 2631
AccB1I GGYRCC 1 cut(s) 1958
AccB7I CCANNNNNTGG 2 cut(s) 1505, 3065
AccII CGCG 2 cut(s) 1632, 2587
AclI AACGTT 1 cut(s) 388
AclWI GGATC 4 cut(s) 420, 887, 2756, 2807
AcsI RAATTY 5 cut(s) 166, 732, 1639, 2126, 2239
AcuI CTGAAG 6 cut(s) 261, 278, 585, 1805, 2322, 2982
AfaI GTAC 4 cut(s) 596, 976, 2501, 3027
AfeI AGCGCT 2 cut(s) 523, 2996
AfiI CCNNNNNNNGG 4 cut(s) 903, 1456, 1505, 3065
AflII CTTAAG 1 cut(s) 2683
AhlI ACTAGT 2 cut(s) 971, 977
AjnI CCWGG 3 cut(s) 718, 2156, 2352
AjuI GAANNNNNNNTTGG 8 cut(s) 834, 866, 2000, 2032, 2228, 2260, 2382, 2414
Alw21I GWGCWC 1 cut(s) 51
Alw26I GTCTC 4 cut(s) 374, 521, 1533, 2291
AlwI GGATC 4 cut(s) 420, 887, 2756, 2807
AlwNI CAGNNNCTG 1 cut(s) 115
Aor51HI AGCGCT 2 cut(s) 523, 2996
AoxI GGCC 5 cut(s) 139, 415, 1364, 1666, 1951
ApeKI GCWGC 3 cut(s) 633, 2172, 2175
ApoI RAATTY 5 cut(s) 166, 732, 1639, 2126, 2239
AseI ATTAAT 1 cut(s) 2673
AspA2I CCTAGG 1 cut(s) 2320
AspLEI GCGC 4 cut(s) 524, 2587, 2997, 3046
AspS9I GGNCC 6 cut(s) 140, 267, 1364, 1667, 1794, 2541
AsuC2I CCSGG 2 cut(s) 17, 1458
AsuHPI GGTGA 7 cut(s) 31, 446, 1238, 1438, 1446, 1861, 2998
AvaII GGWCC 3 cut(s) 267, 1794, 2541
AvrII CCTAGG 1 cut(s) 2320
AxyI CCTNAGG 1 cut(s) 710
BaeGI GKGCMC 1 cut(s) 1990
BanI GGYRCC 1 cut(s) 1958
BbsI GAAGAC 2 cut(s) 841, 849
Bbv12I GWGCWC 1 cut(s) 51
BbvI GCAGC 3 cut(s) 645, 2184, 2187
BccI CCATC 6 cut(s) 112, 407, 670, 1079, 2552, 2630
BceAI ACGGC 1 cut(s) 295
BciT130I CCWGG 3 cut(s) 720, 2158, 2354
BclI TGATCA 6 cut(s) 3, 21, 513, 1116, 1548, 2667
BcnI CCSGG 2 cut(s) 17, 1458
BcoDI GTCTC 4 cut(s) 374, 521, 1533, 2291
BcuI ACTAGT 2 cut(s) 971, 977
BfmI CTRYAG 3 cut(s) 1158, 2142, 2990
BfoI RGCGCY 3 cut(s) 525, 2998, 3047
BfrI CTTAAG 1 cut(s) 2683
BfuAI ACCTGC 2 cut(s) 1725, 2631
BglII AGATCT 1 cut(s) 2001
BisI GCNGC 3 cut(s) 634, 2173, 2176
BlnI CCTAGG 1 cut(s) 2320
BlsI GCNGC 3 cut(s) 635, 2174, 2177
BmcAI AGTACT 1 cut(s) 976
Bme1390I CCNGG 5 cut(s) 17, 720, 1458, 2158, 2354
Bme18I GGWCC 3 cut(s) 267, 1794, 2541
BmgT120I GGNCC 6 cut(s) 140, 267, 1364, 1667, 1794, 2541
BmiI GGNNCC 4 cut(s) 333, 1365, 1917, 1960
BmrFI CCNGG 5 cut(s) 17, 720, 1458, 2158, 2354
BmrI ACTGGG 2 cut(s) 1199, 1335
BmsI GCATC 8 cut(s) 522, 732, 1635, 2064, 2274, 2431, 2777, 2848
BmuI ACTGGG 2 cut(s) 1199, 1335
BpiI GAAGAC 2 cut(s) 841, 849
BplI GAGNNNNNCTC 4 cut(s) 402, 434, 1286, 1318
BpmI CTGGAG 1 cut(s) 2403
Bpu10I CCTNAGC 2 cut(s) 336, 1317
BpuEI CTTGAG 1 cut(s) 511
BpuMI CCSGG 2 cut(s) 17, 1458
BsaBI GATNNNNATC 1 cut(s) 2838
BsaI GGTCTC 2 cut(s) 374, 1533
BsaJI CCNNGG 7 cut(s) 160, 478, 1687, 1954, 2020, 2320, 2367
BsaWI WCCGGW 1 cut(s) 376
BsaXI ACNNNNNCTCC 6 cut(s) 1500, 1530, 1530, 1560, 2998, 3028
Bsc4I CCNNNNNNNGG 4 cut(s) 903, 1456, 1505, 3065
Bse1I ACTGG 5 cut(s) 465, 1194, 1330, 2386, 2526
Bse21I CCTNAGG 1 cut(s) 710
Bse3DI GCAATG 4 cut(s) 834, 2379, 2640, 2801
Bse8I GATNNNNATC 1 cut(s) 2838
BseBI CCWGG 3 cut(s) 720, 2158, 2354
BseDI CCNNGG 7 cut(s) 160, 478, 1687, 1954, 2020, 2320, 2367
BseGI GGATG 4 cut(s) 247, 1078, 2349, 2544
BseJI GATNNNNATC 1 cut(s) 2838
BseLI CCNNNNNNNGG 4 cut(s) 903, 1456, 1505, 3065
BseMI GCAATG 4 cut(s) 834, 2379, 2640, 2801
BseMII CTCAG 6 cut(s) 327, 516, 724, 1317, 1850, 1856
BseNI ACTGG 5 cut(s) 465, 1194, 1330, 2386, 2526
BseRI GAGGAG 2 cut(s) 1180, 2688
BseSI GKGCMC 1 cut(s) 1990
BseXI GCAGC 3 cut(s) 645, 2184, 2187
BseYI CCCAGC 1 cut(s) 2066
Bsh1236I CGCG 2 cut(s) 1632, 2587
BshFI GGCC 5 cut(s) 141, 417, 1366, 1668, 1953
BshNI GGYRCC 1 cut(s) 1958
BsiHKAI GWGCWC 1 cut(s) 51
BsiSI CCGG 4 cut(s) 17, 377, 506, 1457
BslFI GGGAC 4 cut(s) 800, 1281, 2083, 2841
BslI CCNNNNNNNGG 4 cut(s) 903, 1456, 1505, 3065
BsmAI GTCTC 4 cut(s) 374, 521, 1533, 2291
BsmBI CGTCTC 1 cut(s) 521
BsmFI GGGAC 4 cut(s) 800, 1281, 2083, 2841
BsmI GAATGC 1 cut(s) 1343
BsnI GGCC 5 cut(s) 141, 417, 1366, 1668, 1953
Bso31I GGTCTC 2 cut(s) 374, 1533
Bsp1286I GDGCHC 2 cut(s) 51, 1990
Bsp1407I TGTACA 2 cut(s) 594, 3025
Bsp19I CCATGG 3 cut(s) 160, 478, 1687
BspANI GGCC 5 cut(s) 141, 417, 1366, 1668, 1953
BspCNI CTCAG 6 cut(s) 328, 517, 723, 1316, 1849, 1855
BspFNI CGCG 2 cut(s) 1632, 2587
BspHI TCATGA 3 cut(s) 889, 2437, 2632
BspLI GGNNCC 4 cut(s) 333, 1365, 1917, 1960
BspMAI CTGCAG 1 cut(s) 2146
BspMI ACCTGC 2 cut(s) 1725, 2631
BspPI GGATC 4 cut(s) 420, 887, 2756, 2807
BspT107I GGYRCC 1 cut(s) 1958
BspTI CTTAAG 1 cut(s) 2683
BspTNI GGTCTC 2 cut(s) 374, 1533
BsrDI GCAATG 4 cut(s) 834, 2379, 2640, 2801
BsrGI TGTACA 2 cut(s) 594, 3025
BsrI ACTGG 5 cut(s) 465, 1194, 1330, 2386, 2526
BssECI CCNNGG 7 cut(s) 160, 478, 1687, 1954, 2020, 2320, 2367
BssT1I CCWWGG 7 cut(s) 160, 478, 1687, 1954, 2020, 2320, 2367
Bst2UI CCWGG 3 cut(s) 720, 2158, 2354
Bst4CI ACNGT 7 cut(s) 318, 594, 997, 1399, 1555, 2467, 2710
Bst6I CTCTTC 4 cut(s) 576, 813, 1712, 2849
BstAFI CTTAAG 1 cut(s) 2683
BstAUI TGTACA 2 cut(s) 594, 3025
BstC8I GCNNGC 1 cut(s) 987
BstDSI CCRYGG 3 cut(s) 160, 478, 1687
BstF5I GGATG 4 cut(s) 247, 1078, 2349, 2544
BstFNI CGCG 2 cut(s) 1632, 2587
BstH2I RGCGCY 3 cut(s) 525, 2998, 3047
BstHHI GCGC 4 cut(s) 524, 2587, 2997, 3046
BstMAI GTCTC 4 cut(s) 374, 521, 1533, 2291
BstMWI GCNNNNNNNGC 1 cut(s) 470
BstNI CCWGG 3 cut(s) 720, 2158, 2354
BstSCI CCNGG 5 cut(s) 15, 718, 1456, 2156, 2352
BstSFI CTRYAG 3 cut(s) 1158, 2142, 2990
BstSLI GKGCMC 1 cut(s) 1990
BstUI CGCG 2 cut(s) 1632, 2587
BstV1I GCAGC 3 cut(s) 645, 2184, 2187
BstV2I GAAGAC 2 cut(s) 841, 849
BstX2I RGATCY 1 cut(s) 2001
BstYI RGATCY 1 cut(s) 2001
Bsu36I CCTNAGG 1 cut(s) 710
BsuRI GGCC 5 cut(s) 141, 417, 1366, 1668, 1953
BtgI CCRYGG 3 cut(s) 160, 478, 1687
BtgZI GCGATG 1 cut(s) 524
BtsCI GGATG 4 cut(s) 247, 1078, 2349, 2544
BtsI GCAGTG 1 cut(s) 2520
BtsIMutI CAGTG 4 cut(s) 302, 1829, 2520, 2958
BveI ACCTGC 2 cut(s) 1725, 2631
Cac8I GCNNGC 1 cut(s) 987
CaiI CAGNNNCTG 1 cut(s) 115
CciI TCATGA 3 cut(s) 889, 2437, 2632
CfoI GCGC 4 cut(s) 524, 2587, 2997, 3046
Cfr13I GGNCC 6 cut(s) 140, 267, 1364, 1667, 1794, 2541
Csp6I GTAC 4 cut(s) 595, 975, 2500, 3026
CviQI GTAC 4 cut(s) 595, 975, 2500, 3026
Eam1104I CTCTTC 4 cut(s) 576, 813, 1712, 2849
EarI CTCTTC 4 cut(s) 576, 813, 1712, 2849
Eco130I CCWWGG 7 cut(s) 160, 478, 1687, 1954, 2020, 2320, 2367
Eco147I AGGCCT 1 cut(s) 1953
Eco31I GGTCTC 2 cut(s) 374, 1533
Eco47I GGWCC 3 cut(s) 267, 1794, 2541
Eco47III AGCGCT 2 cut(s) 523, 2996
Eco57I CTGAAG 6 cut(s) 261, 278, 585, 1805, 2322, 2982
Eco81I CCTNAGG 1 cut(s) 710
EcoO109I RGGNCCY 3 cut(s) 140, 1364, 1667
EcoRI GAATTC 1 cut(s) 166
EcoRII CCWGG 3 cut(s) 718, 2156, 2352
EcoT14I CCWWGG 7 cut(s) 160, 478, 1687, 1954, 2020, 2320, 2367
ErhI CCWWGG 7 cut(s) 160, 478, 1687, 1954, 2020, 2320, 2367
Esp3I CGTCTC 1 cut(s) 521
FalI AAGNNNNNCTT 4 cut(s) 1925, 1957, 2207, 2239
FaqI GGGAC 4 cut(s) 800, 1281, 2083, 2841
FbaI TGATCA 6 cut(s) 3, 21, 513, 1116, 1548, 2667
Fnu4HI GCNGC 3 cut(s) 634, 2173, 2176
FokI GGATG 4 cut(s) 234, 1065, 2336, 2531
Fsp4HI GCNGC 3 cut(s) 634, 2173, 2176
GlaI GCGC 4 cut(s) 523, 2586, 2996, 3045
GluI GCNGC 3 cut(s) 634, 2173, 2176
GsaI CCCAGC 1 cut(s) 2070
GsuI CTGGAG 1 cut(s) 2403
HaeII RGCGCY 3 cut(s) 525, 2998, 3047
HaeIII GGCC 5 cut(s) 141, 417, 1366, 1668, 1953
HapII CCGG 4 cut(s) 17, 377, 506, 1457
HhaI GCGC 4 cut(s) 524, 2587, 2997, 3046
Hin6I GCGC 4 cut(s) 522, 2585, 2995, 3044
HinP1I GCGC 4 cut(s) 522, 2585, 2995, 3044
HincII GTYRAC 2 cut(s) 2139, 2452
HindII GTYRAC 2 cut(s) 2139, 2452
HindIII AAGCTT 4 cut(s) 34, 767, 1561, 2312
HpaII CCGG 4 cut(s) 17, 377, 506, 1457
HphI GGTGA 7 cut(s) 31, 446, 1238, 1438, 1446, 1861, 2998
Hpy188I TCNGA 9 cut(s) 117, 137, 430, 604, 763, 1306, 1908, 1975, 2918
Hpy99I CGWCG 1 cut(s) 752
HpyCH4III ACNGT 7 cut(s) 318, 594, 997, 1399, 1555, 2467, 2710
HpyCH4IV ACGT 1 cut(s) 388
HpyF10VI GCNNNNNNNGC 1 cut(s) 470
HpySE526I ACGT 1 cut(s) 388
HspAI GCGC 4 cut(s) 522, 2585, 2995, 3044
Ksp22I TGATCA 6 cut(s) 3, 21, 513, 1116, 1548, 2667
LmnI GCTCC 3 cut(s) 54, 1915, 2082
Lsp1109I GCAGC 3 cut(s) 645, 2184, 2187
LweI GCATC 8 cut(s) 522, 732, 1635, 2064, 2274, 2431, 2777, 2848
MaeII ACGT 1 cut(s) 388
MaeIII GTNAC 2 cut(s) 2330, 2704
MfeI CAATTG 1 cut(s) 1991
MflI RGATCY 1 cut(s) 2001
MhlI GDGCHC 2 cut(s) 51, 1990
MlyI GAGTC 7 cut(s) 88, 147, 782, 1615, 1668, 2327, 2687
MmeI TCCRAC 3 cut(s) 1734, 2031, 3041
MseI TTAA 8 cut(s) 668, 686, 807, 1605, 2033, 2228, 2673, 2684
MslI CAYNNNNRTG 2 cut(s) 1083, 2439
MspA1I CMGCKG 1 cut(s) 2726
MspCI CTTAAG 1 cut(s) 2683
MspI CCGG 4 cut(s) 17, 377, 506, 1457
MspR9I CCNGG 5 cut(s) 17, 720, 1458, 2158, 2354
MunI CAATTG 1 cut(s) 1991
Mva1269I GAATGC 1 cut(s) 1343
MvaI CCWGG 3 cut(s) 720, 2158, 2354
MvnI CGCG 2 cut(s) 1632, 2587
MwoI GCNNNNNNNGC 1 cut(s) 470
NciI CCSGG 2 cut(s) 17, 1458
NcoI CCATGG 3 cut(s) 160, 478, 1687
NlaIV GGNNCC 4 cut(s) 333, 1365, 1917, 1960
NmuCI GTSAC 1 cut(s) 2330
PagI TCATGA 3 cut(s) 889, 2437, 2632
PceI AGGCCT 1 cut(s) 1953
PctI GAATGC 1 cut(s) 1343
PflMI CCANNNNNTGG 2 cut(s) 1505, 3065
PfoI TCCNGGA 2 cut(s) 2156, 2352
PkrI GCNGC 3 cut(s) 635, 2174, 2177
PleI GAGTC 7 cut(s) 88, 147, 782, 1615, 1667, 2327, 2686
PpsI GAGTC 7 cut(s) 88, 147, 782, 1615, 1667, 2327, 2686
PshBI ATTAAT 1 cut(s) 2673
PsiI TTATAA 1 cut(s) 738
Psp1406I AACGTT 1 cut(s) 388
Psp6I CCWGG 3 cut(s) 718, 2156, 2352
PspFI CCCAGC 1 cut(s) 2066
PspGI CCWGG 3 cut(s) 718, 2156, 2352
PspN4I GGNNCC 4 cut(s) 333, 1365, 1917, 1960
PspPI GGNCC 6 cut(s) 140, 267, 1364, 1667, 1794, 2541
PstI CTGCAG 1 cut(s) 2146
PstNI CAGNNNCTG 1 cut(s) 115
PsuI RGATCY 1 cut(s) 2001
PvuII CAGCTG 1 cut(s) 2726
RsaI GTAC 4 cut(s) 596, 976, 2501, 3027
RsaNI GTAC 4 cut(s) 595, 975, 2500, 3026
RseI CAYNNNNRTG 2 cut(s) 1083, 2439
SaqAI TTAA 8 cut(s) 668, 686, 807, 1605, 2033, 2228, 2673, 2684
SatI GCNGC 3 cut(s) 634, 2173, 2176
Sau96I GGNCC 6 cut(s) 140, 267, 1364, 1667, 1794, 2541
ScaI AGTACT 1 cut(s) 976
SchI GAGTC 7 cut(s) 88, 147, 782, 1615, 1668, 2327, 2687
ScrFI CCNGG 5 cut(s) 17, 720, 1458, 2158, 2354
SduI GDGCHC 2 cut(s) 51, 1990
SfaNI GCATC 8 cut(s) 522, 732, 1635, 2064, 2274, 2431, 2777, 2848
SfcI CTRYAG 3 cut(s) 1158, 2142, 2990
SinI GGWCC 3 cut(s) 267, 1794, 2541
SmiMI CAYNNNNRTG 2 cut(s) 1083, 2439
SmlI CTYRAG 2 cut(s) 490, 2683
SmoI CTYRAG 2 cut(s) 490, 2683
SpeI ACTAGT 2 cut(s) 971, 977
SseBI AGGCCT 1 cut(s) 1953
StuI AGGCCT 1 cut(s) 1953
StyD4I CCNGG 5 cut(s) 15, 718, 1456, 2156, 2352
StyI CCWWGG 7 cut(s) 160, 478, 1687, 1954, 2020, 2320, 2367
TaaI ACNGT 7 cut(s) 318, 594, 997, 1399, 1555, 2467, 2710
TaiI ACGT 1 cut(s) 391
TaqI TCGA 4 cut(s) 614, 917, 1369, 2946
TatI WGTACW 4 cut(s) 594, 974, 2499, 3025
Tru1I TTAA 8 cut(s) 668, 686, 807, 1605, 2033, 2228, 2673, 2684
Tru9I TTAA 8 cut(s) 668, 686, 807, 1605, 2033, 2228, 2673, 2684
TscAI CASTG 4 cut(s) 302, 1829, 2527, 2965
TseFI GTSAC 1 cut(s) 2330
TseI GCWGC 3 cut(s) 633, 2172, 2175
Tsp45I GTSAC 1 cut(s) 2330
TspGWI ACGGA 1 cut(s) 2318
TspRI CASTG 4 cut(s) 302, 1829, 2527, 2965
Van91I CCANNNNNTGG 2 cut(s) 1505, 3065
Vha464I CTTAAG 1 cut(s) 2683
VpaK11BI GGWCC 3 cut(s) 267, 1794, 2541
VspI ATTAAT 1 cut(s) 2673
XapI RAATTY 5 cut(s) 166, 732, 1639, 2126, 2239
XcmI CCANNNNNNNNNTGG 2 cut(s) 476, 2018
XmaJI CCTAGG 1 cut(s) 2320
ZrmI AGTACT 1 cut(s) 976
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.