pycom16g03060

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0000078
Physical Location & Seq
Forward (+)
1929300 .. 1931262
1963 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g03060.4

Sequence Viewer

Length: 1662 bp
ATGAAATCTGTGGGAGGCACAGTGATCGTTCTTTCAAGCTTGCTGTGTCTGCTCCTCCTCTTAGCTCTCATCAAGATTTTTCATAAACTATGGTGGACTCCGATTCGAATACAGAATCTGGTGGCTCTGCAGGGAATCAAAGGCCCTTCTTACCGATTCGTCCATGGAAACACCAAAGAGATCTCCAGCATGCAAGAAGAAGCCATGAGGAGGCCCAAAAGTTTATCACATGACATATTTTCTCAAGTTCAACCTCACATACACTTGTGGACAAAGACATATGGAGCAAATTTCCTTCAATGGTATGGTGTTCAAGCCCAATTGATCATCACAGAGCCTGAACTGTGCAAAGAGATACTTACGAATAAAGATAAAGCTTATCCGAAAAGCGAGACGAAAGGCTATGCGAGAAGGCTATTAGGAGATGGACTTGTCGTAAGTGATGGTGAAAAATGGGCTAAAATGAGAAAGTTAGCCAACTATGCCTTCCACGGAGAGATCTTAAAGGGTATGGCTCCAACAATGATAGCTAGTGCTGAGACGATGCTGGAAAATTGGAAAGAACACGACGGCAAAGAGATTGATGTGTTTAAAGAATTTAGGTTGTACACCTCAGAAGTGATTTCCAGGACGGCCTTTGGCAGCAGCTACTTAGAAGGGAAGAACATTTTCGAGAACCTGGAGAAGTTAGCCTACTTATCATTCAAAAATGCGTTCAACCTCAGGTTTCCCGGCATCAGTAGGTTTATTAAATCCAAGGATGAGATAGAATCAGAAAAGCTTGAGAAAAGTATCCGCAACTCTATCATGGAGATGATCAGGAAACGAGAAGACAAGGCAATGGTTGGAGAAGAAGGCAGCTTTGGTGATGATTTTCTTGGAGTACTCATAAAAGCTCATCATGACGCCGATGAGAACCAGAGAACTTCGATTGATGAGATAGTTGACGAGTGCAAGACATTTTACCTTGGTGGACAAGAAACCACTAGTAGTGGACTTGCTTGGACTGTCTTTCTTCTGGCAATCCATACCGATTGGCAAGAGGAAGCAAGGAAGGAGGTGATCCAAATATTTGGAAAACAAAACCCTAATCTCGATGGCACTGCCAAACTAAAAATTGTAAGAATGTCAACAACTCACTCATTTTCTTGTCTTTGTTGCGGCATATATGTTACCTTGCAGCTCGAGGTTCTGTTTTTTATTCTTTTTCATGATTCATTTTTCGAGCAGATGAATATGATCTTCAACGAGTCGCTAAGGTTATATCCACCGGTAGTTGCCATGGAGAGGAAAATTGGAAGGGAAGTTAGGCTGGGAAAACATGTCCTTCCTGCTAATGTTGAAATAACCATTCCATGCTTAGCCCTTCAGCACGAGCCTCAAATCTGGGGAGAAGATGTGCTACTTTTCAAACCGGAGCGATTCTCGGAAGGTGTTGCTAAGGCTACAAAGAACAACATAGCCGCATTCTTACCATGGGGATTGGGACCTCGAAGTTGTGTGGGATCTAATTTTGCAACCATGGAAACAAAGATTGCTCTGTCGATGATTCTACAACGCTTCTCTTTCACACTTTCCCCAGCCTACATCCACTCGCCCTACCGGCTTCTTACAGTGCGGCCGCAACATGGAGTTCAAGTAATGCTACGCTCGCTCACATGA

Protein Analysis

554

Amino Acids

63.05

Weight (kDa)

8.57

Isoelectric Point (pI)

38.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 5 cut(s) 796, 1161, 1464, 1618, 1622
AclWI GGATC 2 cut(s) 1057, 1513
AcoI YGGCCR 1 cut(s) 1619
AcsI RAATTY 2 cut(s) 289, 596
AcuI CTGAAG 1 cut(s) 1352
AcyI GRCGYC 1 cut(s) 906
AfaI GTAC 2 cut(s) 608, 885
AfiI CCNNNNNNNGG 3 cut(s) 210, 1287, 1628
AflIII ACRYGT 1 cut(s) 1321
AgeI ACCGGT 1 cut(s) 1270
AhlI ACTAGT 1 cut(s) 986
AjnI CCWGG 2 cut(s) 626, 678
AjuI GAANNNNNNNTTGG 4 cut(s) 470, 502, 846, 878
AluBI AGCT 9 cut(s) 39, 65, 377, 530, 648, 781, 861, 896, 1183
AluI AGCT 9 cut(s) 39, 65, 377, 530, 648, 781, 861, 896, 1183
Alw26I GTCTC 2 cut(s) 386, 533
AlwI GGATC 2 cut(s) 1057, 1513
AlwNI CAGNNNCTG 2 cut(s) 118, 338
Ama87I CYCGRG 1 cut(s) 1184
AoxI GGCC 4 cut(s) 142, 212, 633, 1619
ApeKI GCWGC 4 cut(s) 642, 645, 858, 1180
ApoI RAATTY 2 cut(s) 289, 596
AsiGI ACCGGT 1 cut(s) 1270
Asp700I GAANNNNTTC 1 cut(s) 668
AspS9I GGNCC 3 cut(s) 143, 213, 1487
AsuC2I CCSGG 1 cut(s) 732
AsuHPI GGTGA 3 cut(s) 458, 878, 1072
AsuII TTCGAA 1 cut(s) 106
AvaI CYCGRG 1 cut(s) 1184
AvaII GGWCC 1 cut(s) 1487
AxyI CCTNAGG 1 cut(s) 722
BarI GAAGNNNNNNTAC 4 cut(s) 677, 709, 1386, 1418
BauI CACGAG 1 cut(s) 1373
BbsI GAAGAC 1 cut(s) 837
BbvI GCAGC 4 cut(s) 654, 657, 870, 1192
BccI CCATC 3 cut(s) 419, 437, 1091
BceAI ACGGC 2 cut(s) 586, 648
BcgI CGANNNNNNTGC 4 cut(s) 7, 41, 1085, 1119
BciT130I CCWGG 2 cut(s) 628, 680
BciVI GTATCC 1 cut(s) 803
BclI TGATCA 2 cut(s) 324, 816
BcnI CCSGG 1 cut(s) 732
BcoDI GTCTC 2 cut(s) 386, 533
BcuI ACTAGT 1 cut(s) 986
BfaI CTAG 2 cut(s) 531, 987
BfmI CTRYAG 1 cut(s) 128
BfuI GTATCC 1 cut(s) 803
BglI GCCNNNNNGGC 1 cut(s) 1603
BglII AGATCT 2 cut(s) 180, 498
BisI GCNGC 8 cut(s) 643, 646, 859, 1162, 1181, 1464, 1619, 1622
BlpI GCTNAGC 1 cut(s) 1360
BlsI GCNGC 8 cut(s) 644, 647, 860, 1163, 1182, 1465, 1620, 1623
BmcAI AGTACT 1 cut(s) 885
Bme1390I CCNGG 3 cut(s) 628, 680, 732
Bme18I GGWCC 1 cut(s) 1487
BmeT110I CYCGRG 1 cut(s) 1184
BmgT120I GGNCC 3 cut(s) 143, 213, 1487
BmiI GGNNCC 2 cut(s) 516, 1488
BmrFI CCNGG 3 cut(s) 628, 680, 732
BmsI GCATC 2 cut(s) 534, 744
BpiI GAAGAC 1 cut(s) 837
BplI GAGNNNNNCTC 2 cut(s) 1409, 1441
BpmI CTGGAG 2 cut(s) 169, 701
Bpu10I CCTNAGC 2 cut(s) 1256, 1440
Bpu1102I GCTNAGC 1 cut(s) 1360
Bpu14I TTCGAA 1 cut(s) 106
BpuEI CTTGAG 2 cut(s) 228, 803
BpuMI CCSGG 1 cut(s) 732
BsaHI GRCGYC 1 cut(s) 906
BsaJI CCNNGG 7 cut(s) 163, 490, 756, 967, 1281, 1475, 1521
BsaWI WCCGGW 2 cut(s) 1270, 1414
BsaXI ACNNNNNCTCC 6 cut(s) 6, 36, 1383, 1413, 1623, 1653
Bsc4I CCNNNNNNNGG 3 cut(s) 210, 1287, 1628
Bse118I RCCGGY 2 cut(s) 1270, 1602
Bse21I CCTNAGG 1 cut(s) 722
Bse3DI GCAATG 1 cut(s) 846
BseBI CCWGG 2 cut(s) 628, 680
BseDI CCNNGG 7 cut(s) 163, 490, 756, 967, 1281, 1475, 1521
BseGI GGATG 2 cut(s) 766, 1587
BseLI CCNNNNNNNGG 3 cut(s) 210, 1287, 1628
BseMI GCAATG 1 cut(s) 846
BseMII CTCAG 3 cut(s) 528, 627, 736
BseRI GAGGAG 3 cut(s) 44, 47, 223
BseX3I CGGCCG 1 cut(s) 1619
BseXI GCAGC 4 cut(s) 654, 657, 870, 1192
BseYI CCCAGC 2 cut(s) 1312, 1579
Bsh1285I CGRYCG 1 cut(s) 1622
BshFI GGCC 4 cut(s) 144, 214, 635, 1621
BshTI ACCGGT 1 cut(s) 1270
BsiEI CGRYCG 1 cut(s) 1622
BsiHKCI CYCGRG 1 cut(s) 1184
BsiSI CCGG 4 cut(s) 732, 1271, 1415, 1603
BslFI GGGAC 1 cut(s) 1500
BslI CCNNNNNNNGG 3 cut(s) 210, 1287, 1628
BsmAI GTCTC 2 cut(s) 386, 533
BsmBI CGTCTC 2 cut(s) 386, 533
BsmFI GGGAC 1 cut(s) 1500
BsmI GAATGC 1 cut(s) 1466
BsnI GGCC 4 cut(s) 144, 214, 635, 1621
BsoBI CYCGRG 1 cut(s) 1184
Bsp119I TTCGAA 1 cut(s) 106
Bsp1407I TGTACA 1 cut(s) 606
Bsp143I GATC 8 cut(s) 24, 180, 324, 498, 816, 1062, 1239, 1505
Bsp1720I GCTNAGC 1 cut(s) 1360
Bsp19I CCATGG 4 cut(s) 163, 1281, 1475, 1521
BspACI CCGC 5 cut(s) 796, 1161, 1464, 1618, 1622
BspANI GGCC 4 cut(s) 144, 214, 635, 1621
BspCNI CTCAG 3 cut(s) 529, 626, 735
BspHI TCATGA 2 cut(s) 901, 1210
BspLI GGNNCC 2 cut(s) 516, 1488
BspMAI CTGCAG 1 cut(s) 132
BspPI GGATC 2 cut(s) 1057, 1513
BspT104I TTCGAA 1 cut(s) 106
BsrDI GCAATG 1 cut(s) 846
BsrFI RCCGGY 2 cut(s) 1270, 1602
BsrGI TGTACA 1 cut(s) 606
BssAI RCCGGY 2 cut(s) 1270, 1602
BssECI CCNNGG 7 cut(s) 163, 490, 756, 967, 1281, 1475, 1521
BssMI GATC 8 cut(s) 24, 180, 324, 498, 816, 1062, 1239, 1505
BssNI GRCGYC 1 cut(s) 906
BssSI CACGAG 1 cut(s) 1373
BssT1I CCWWGG 6 cut(s) 163, 756, 967, 1281, 1475, 1521
Bst2BI CACGAG 1 cut(s) 1373
Bst2UI CCWGG 2 cut(s) 628, 680
Bst4CI ACNGT 4 cut(s) 22, 345, 1009, 1615
BstACI GRCGYC 1 cut(s) 906
BstAUI TGTACA 1 cut(s) 606
BstBI TTCGAA 1 cut(s) 106
BstC8I GCNNGC 3 cut(s) 41, 191, 1652
BstDEI CTNAG 8 cut(s) 61, 537, 613, 652, 722, 1256, 1360, 1440
BstDSI CCRYGG 5 cut(s) 163, 490, 1281, 1475, 1521
BstF5I GGATG 2 cut(s) 766, 1587
BstKTI GATC 8 cut(s) 27, 183, 327, 501, 819, 1065, 1242, 1508
BstMAI GTCTC 2 cut(s) 386, 533
BstMBI GATC 8 cut(s) 24, 180, 324, 498, 816, 1062, 1239, 1505
BstMCI CGRYCG 1 cut(s) 1622
BstMWI GCNNNNNNNGC 4 cut(s) 49, 482, 1603, 1651
BstNI CCWGG 2 cut(s) 628, 680
BstNSI RCATGY 2 cut(s) 193, 1325
BstSCI CCNGG 3 cut(s) 626, 678, 730
BstSFI CTRYAG 1 cut(s) 128
BstV1I GCAGC 4 cut(s) 654, 657, 870, 1192
BstV2I GAAGAC 1 cut(s) 837
BstX2I RGATCY 3 cut(s) 180, 498, 1505
BstXI CCANNNNNNTGG 1 cut(s) 1073
BstYI RGATCY 3 cut(s) 180, 498, 1505
BstZI CGGCCG 1 cut(s) 1619
Bsu36I CCTNAGG 1 cut(s) 722
BsuI GTATCC 1 cut(s) 803
BsuRI GGCC 4 cut(s) 144, 214, 635, 1621
BtgI CCRYGG 5 cut(s) 163, 490, 1281, 1475, 1521
BtsCI GGATG 2 cut(s) 766, 1587
BtsI GCAGTG 1 cut(s) 1101
BtsIMutI CAGTG 3 cut(s) 27, 1101, 1620
Cac8I GCNNGC 3 cut(s) 41, 191, 1652
CaiI CAGNNNCTG 2 cut(s) 118, 338
CciI TCATGA 2 cut(s) 901, 1210
CciNI GCGGCCGC 1 cut(s) 1619
Cfr10I RCCGGY 2 cut(s) 1270, 1602
Cfr13I GGNCC 3 cut(s) 143, 213, 1487
CseI GACGC 1 cut(s) 914
Csp6I GTAC 2 cut(s) 607, 884
CspAI ACCGGT 1 cut(s) 1270
CviQI GTAC 2 cut(s) 607, 884
DdeI CTNAG 8 cut(s) 61, 537, 613, 652, 722, 1256, 1360, 1440
DpnI GATC 8 cut(s) 26, 182, 326, 500, 818, 1064, 1241, 1507
DpnII GATC 8 cut(s) 24, 180, 324, 498, 816, 1062, 1239, 1505
DraI TTTAAA 1 cut(s) 592
EaeI YGGCCR 1 cut(s) 1619
EagI CGGCCG 1 cut(s) 1619
EclXI CGGCCG 1 cut(s) 1619
Eco130I CCWWGG 6 cut(s) 163, 756, 967, 1281, 1475, 1521
Eco47I GGWCC 1 cut(s) 1487
Eco52I CGGCCG 1 cut(s) 1619
Eco57I CTGAAG 1 cut(s) 1352
Eco81I CCTNAGG 1 cut(s) 722
Eco88I CYCGRG 1 cut(s) 1184
EcoO109I RGGNCCY 2 cut(s) 143, 1487
EcoRII CCWGG 2 cut(s) 626, 678
EcoT14I CCWWGG 6 cut(s) 163, 756, 967, 1281, 1475, 1521
ErhI CCWWGG 6 cut(s) 163, 756, 967, 1281, 1475, 1521
Esp3I CGTCTC 2 cut(s) 386, 533
FalI AAGNNNNNCTT 2 cut(s) 342, 374
FaqI GGGAC 1 cut(s) 1500
FauNDI CATATG 1 cut(s) 280
FbaI TGATCA 2 cut(s) 324, 816
Fnu4HI GCNGC 8 cut(s) 643, 646, 859, 1162, 1181, 1464, 1619, 1622
FokI GGATG 2 cut(s) 773, 1574
Fsp4HI GCNGC 8 cut(s) 643, 646, 859, 1162, 1181, 1464, 1619, 1622
FspBI CTAG 2 cut(s) 531, 987
GluI GCNGC 8 cut(s) 643, 646, 859, 1162, 1181, 1464, 1619, 1622
GsaI CCCAGC 2 cut(s) 1316, 1583
GsuI CTGGAG 2 cut(s) 169, 701
HaeIII GGCC 4 cut(s) 144, 214, 635, 1621
HapII CCGG 4 cut(s) 732, 1271, 1415, 1603
HgaI GACGC 1 cut(s) 914
Hin1I GRCGYC 1 cut(s) 906
HincII GTYRAC 2 cut(s) 946, 1131
HindII GTYRAC 2 cut(s) 946, 1131
HindIII AAGCTT 3 cut(s) 37, 375, 779
HpaII CCGG 4 cut(s) 732, 1271, 1415, 1603
HphI GGTGA 3 cut(s) 458, 878, 1072
Hpy166II GTNNAC 7 cut(s) 96, 270, 609, 946, 974, 995, 1131
Hpy188I TCNGA 5 cut(s) 102, 384, 616, 775, 1429
Hpy188III TCNNGA 6 cut(s) 73, 673, 820, 902, 1094, 1211
Hpy8I GTNNAC 7 cut(s) 96, 270, 609, 946, 974, 995, 1131
Hpy99I CGWCG 1 cut(s) 572
HpyCH4III ACNGT 4 cut(s) 22, 345, 1009, 1615
HpyCH4V TGCA 6 cut(s) 130, 193, 348, 954, 1180, 1517
HpyF10VI GCNNNNNNNGC 4 cut(s) 49, 482, 1603, 1651
HpyF3I CTNAG 8 cut(s) 61, 537, 613, 652, 722, 1256, 1360, 1440
Hsp92I GRCGYC 1 cut(s) 906
Ksp22I TGATCA 2 cut(s) 324, 816
Kzo9I GATC 8 cut(s) 24, 180, 324, 498, 816, 1062, 1239, 1505
LmnI GCTCC 4 cut(s) 57, 284, 520, 1417
Lsp1109I GCAGC 4 cut(s) 654, 657, 870, 1192
LweI GCATC 2 cut(s) 534, 744
MaeI CTAG 2 cut(s) 531, 987
MaeIII GTNAC 1 cut(s) 1171
MalI GATC 8 cut(s) 26, 182, 326, 500, 818, 1064, 1241, 1507
MboI GATC 8 cut(s) 24, 180, 324, 498, 816, 1062, 1239, 1505
MboII GAAGA 7 cut(s) 209, 673, 842, 863, 1007, 1234, 1406
MfeI CAATTG 1 cut(s) 320
MflI RGATCY 3 cut(s) 180, 498, 1505
MluCI AATT 7 cut(s) 289, 320, 553, 596, 1116, 1293, 1510
MlyI GAGTC 2 cut(s) 91, 1259
MmeI TCCRAC 2 cut(s) 542, 826
MroXI GAANNNNTTC 1 cut(s) 668
MseI TTAA 3 cut(s) 503, 591, 750
MslI CAYNNNNRTG 1 cut(s) 812
MspI CCGG 4 cut(s) 732, 1271, 1415, 1603
MspR9I CCNGG 3 cut(s) 628, 680, 732
MunI CAATTG 1 cut(s) 320
Mva1269I GAATGC 1 cut(s) 1466
MvaI CCWGG 2 cut(s) 628, 680
MwoI GCNNNNNNNGC 4 cut(s) 49, 482, 1603, 1651
NciI CCSGG 1 cut(s) 732
NcoI CCATGG 4 cut(s) 163, 1281, 1475, 1521
NdeI CATATG 1 cut(s) 280
NdeII GATC 8 cut(s) 24, 180, 324, 498, 816, 1062, 1239, 1505
NlaIV GGNNCC 2 cut(s) 516, 1488
NotI GCGGCCGC 1 cut(s) 1619
NspI RCATGY 2 cut(s) 193, 1325
NspV TTCGAA 1 cut(s) 106
PaeI GCATGC 1 cut(s) 193
PaeR7I CTCGAG 1 cut(s) 1184
PagI TCATGA 2 cut(s) 901, 1210
PciI ACATGT 1 cut(s) 1321
PctI GAATGC 1 cut(s) 1466
PdmI GAANNNNTTC 1 cut(s) 668
PfeI GAWTC 8 cut(s) 103, 115, 135, 156, 770, 1214, 1422, 1549
PfoI TCCNGGA 1 cut(s) 626
PinAI ACCGGT 1 cut(s) 1270
PkrI GCNGC 8 cut(s) 644, 647, 860, 1163, 1182, 1465, 1620, 1623
PleI GAGTC 2 cut(s) 91, 1258
PpsI GAGTC 2 cut(s) 91, 1258
PpuMI RGGWCCY 1 cut(s) 1487
PscI ACATGT 1 cut(s) 1321
Psp5II RGGWCCY 1 cut(s) 1487
Psp6I CCWGG 2 cut(s) 626, 678
PspFI CCCAGC 2 cut(s) 1312, 1579
PspGI CCWGG 2 cut(s) 626, 678
PspN4I GGNNCC 2 cut(s) 516, 1488
PspPI GGNCC 3 cut(s) 143, 213, 1487
PspPPI RGGWCCY 1 cut(s) 1487
PspXI VCTCGAGB 1 cut(s) 1184
PstI CTGCAG 1 cut(s) 132
PstNI CAGNNNCTG 2 cut(s) 118, 338
PsuI RGATCY 3 cut(s) 180, 498, 1505
RsaI GTAC 2 cut(s) 608, 885
RsaNI GTAC 2 cut(s) 607, 884
RseI CAYNNNNRTG 1 cut(s) 812
SaqAI TTAA 3 cut(s) 503, 591, 750
SatI GCNGC 8 cut(s) 643, 646, 859, 1162, 1181, 1464, 1619, 1622
Sau3AI GATC 8 cut(s) 24, 180, 324, 498, 816, 1062, 1239, 1505
Sau96I GGNCC 3 cut(s) 143, 213, 1487
ScaI AGTACT 1 cut(s) 885
SchI GAGTC 2 cut(s) 91, 1259
ScrFI CCNGG 3 cut(s) 628, 680, 732
SfaNI GCATC 2 cut(s) 534, 744
SfcI CTRYAG 1 cut(s) 128
Sfr274I CTCGAG 1 cut(s) 1184
SfuI TTCGAA 1 cut(s) 106
SinI GGWCC 1 cut(s) 1487
SlaI CTCGAG 1 cut(s) 1184
SmiMI CAYNNNNRTG 1 cut(s) 812
SmlI CTYRAG 3 cut(s) 243, 782, 1184
SmoI CTYRAG 3 cut(s) 243, 782, 1184
SpeI ACTAGT 1 cut(s) 986
SphI GCATGC 1 cut(s) 193
Sse9I AATT 7 cut(s) 289, 320, 553, 596, 1116, 1293, 1510
SsiI CCGC 5 cut(s) 796, 1161, 1464, 1618, 1622
SspI AATATT 1 cut(s) 1071
SspMI CTAG 2 cut(s) 531, 987
StyD4I CCNGG 3 cut(s) 626, 678, 730
StyI CCWWGG 6 cut(s) 163, 756, 967, 1281, 1475, 1521
TaaI ACNGT 4 cut(s) 22, 345, 1009, 1615
TaqI TCGA 8 cut(s) 106, 672, 929, 1095, 1185, 1224, 1492, 1544
TasI AATT 7 cut(s) 289, 320, 553, 596, 1116, 1293, 1510
TatI WGTACW 2 cut(s) 606, 883
TauI GCSGC 4 cut(s) 1164, 1466, 1621, 1624
TfiI GAWTC 8 cut(s) 103, 115, 135, 156, 770, 1214, 1422, 1549
Tru1I TTAA 3 cut(s) 503, 591, 750
Tru9I TTAA 3 cut(s) 503, 591, 750
TscAI CASTG 3 cut(s) 27, 1108, 1620
TseI GCWGC 4 cut(s) 642, 645, 858, 1180
TspDTI ATGAA 5 cut(s) 17, 71, 1199, 1206, 1247
TspGWI ACGGA 1 cut(s) 507
TspRI CASTG 3 cut(s) 27, 1108, 1620
VpaK11BI GGWCC 1 cut(s) 1487
XapI RAATTY 2 cut(s) 289, 596
XceI RCATGY 2 cut(s) 193, 1325
XhoI CTCGAG 1 cut(s) 1184
XmnI GAANNNNTTC 1 cut(s) 668
XspI CTAG 2 cut(s) 531, 987
ZrmI AGTACT 1 cut(s) 885
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.