Rmu_sc0028438.1_g000001

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0028438.1
Physical Location & Seq
Forward (+)
1 .. 975
975 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0028438.1_g000001.1.cds

Sequence Viewer

Length: 808 bp
caagttttataaaggcagtgatgagaaggaatcagagaagcttgagaaaggaataggagacaccataatagagattgttaagaaaagagagagggaggcagtgactggagaagaaggcagctttgggactgattttcttggattgcttttaaaggctcaccatgctaccaatgaaaagcagaggatttcagtgaatgaattggtcgaggagtgcaagacattttactttgctggacaagaaacgaccaactctttgcttgtttggactgtctttctgctggccctccatccggaatggcaagaggaagcaagaaaggaggtcctgcagttatttggcaaaaaaactccaaatcctgatggccttgccaaactaaaaacgatgagtatgatcatcaatgagtctctgaggctatatcctcctgtcatttcccttgtacgaacagtggataaggaagttaaattgggaaacctcattatacctgctaatgttgaattgcttgtctcaaatctagcacttcatcatgaacctcagttctggggacaagatgttaaacatttcaaaactgagagattctctgaaggtgttgctagtgctactaacaacaacatggctgcattcttaccctttggaatgggacctagaacttgtgttggcctcaactttgccaccattgaagcaaagattgctctttcaatgattctacaacgctactccttcacgctttccccagcctatgtccactcgccccttcagtttctcacagttcgtccacagcatggacttcaagtaattttatactcagtatga

Protein Analysis

268

Amino Acids

30.17

Weight (kDa)

6.79

Isoelectric Point (pI)

35.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 10
Acc36I ACCTGC 1 cut(s) 488
AccB7I CCANNNNNTGG 1 cut(s) 777
AccIII TCCGGA 1 cut(s) 290
AcuI CTGAAG 2 cut(s) 598, 735
AfaI GTAC 1 cut(s) 436
AfiI CCNNNNNNNGG 2 cut(s) 290, 777
AgsI TTSAA 5 cut(s) 492, 560, 675, 694, 786
AjuI GAANNNNNNNTTGG 2 cut(s) 106, 138
AluBI AGCT 2 cut(s) 41, 121
AluI AGCT 2 cut(s) 41, 121
Alw26I GTCTC 3 cut(s) 52, 406, 506
AlwNI CAGNNNCTG 1 cut(s) 105
Aor13HI TCCGGA 1 cut(s) 290
AoxI GGCC 3 cut(s) 280, 359, 653
ApeKI GCWGC 2 cut(s) 118, 612
ArsI GACNNNNNNTTYG 2 cut(s) 236, 268
AspS9I GGNCC 3 cut(s) 281, 320, 636
AsuHPI GGTGA 1 cut(s) 150
AvaII GGWCC 2 cut(s) 320, 636
BbvI GCAGC 2 cut(s) 130, 599
BccI CCATC 2 cut(s) 295, 351
BclI TGATCA 1 cut(s) 388
BcoDI GTCTC 3 cut(s) 52, 406, 506
BfaI CTAG 3 cut(s) 510, 589, 640
BfmI CTRYAG 1 cut(s) 324
BfuAI ACCTGC 1 cut(s) 488
BisI GCNGC 2 cut(s) 119, 613
BlsI GCNGC 2 cut(s) 120, 614
Bme18I GGWCC 2 cut(s) 320, 636
BmgT120I GGNCC 3 cut(s) 281, 320, 636
BmiI GGNNCC 1 cut(s) 637
BplI GAGNNNNNCTC 2 cut(s) 558, 590
BpmI CTGGAG 1 cut(s) 127
BpuEI CTTGAG 1 cut(s) 63
BsaWI WCCGGW 1 cut(s) 290
Bsc4I CCNNNNNNNGG 2 cut(s) 290, 777
Bse1I ACTGG 1 cut(s) 110
BseAI TCCGGA 1 cut(s) 290
BseGI GGATG 1 cut(s) 287
BseLI CCNNNNNNNGG 2 cut(s) 290, 777
BseMII CTCAG 3 cut(s) 396, 543, 556
BseNI ACTGG 1 cut(s) 110
BseRI GAGGAG 1 cut(s) 222
BseXI GCAGC 2 cut(s) 130, 599
BseYI CCCAGC 1 cut(s) 728
BshFI GGCC 3 cut(s) 282, 361, 655
BsiSI CCGG 1 cut(s) 291
BslFI GGGAC 3 cut(s) 140, 553, 649
BslI CCNNNNNNNGG 2 cut(s) 290, 777
BsmAI GTCTC 3 cut(s) 52, 406, 506
BsmFI GGGAC 3 cut(s) 140, 553, 649
BsmI GAATGC 1 cut(s) 615
BsnI GGCC 3 cut(s) 282, 361, 655
Bsp13I TCCGGA 1 cut(s) 290
Bsp143I GATC 1 cut(s) 388
BspANI GGCC 3 cut(s) 282, 361, 655
BspCNI CTCAG 3 cut(s) 397, 542, 557
BspEI TCCGGA 1 cut(s) 290
BspHI TCATGA 1 cut(s) 521
BspLI GGNNCC 1 cut(s) 637
BspMAI CTGCAG 1 cut(s) 328
BspMI ACCTGC 1 cut(s) 488
BsrI ACTGG 1 cut(s) 110
BssMI GATC 1 cut(s) 388
Bst4CI ACNGT 3 cut(s) 269, 443, 764
BstAPI GCANNNNNTGC 1 cut(s) 684
BstC8I GCNNGC 1 cut(s) 280
BstDEI CTNAG 4 cut(s) 405, 529, 565, 800
BstF5I GGATG 1 cut(s) 287
BstKTI GATC 1 cut(s) 391
BstMAI GTCTC 3 cut(s) 52, 406, 506
BstMBI GATC 1 cut(s) 388
BstMWI GCNNNNNNNGC 2 cut(s) 162, 684
BstSFI CTRYAG 1 cut(s) 324
BstV1I GCAGC 2 cut(s) 130, 599
BsuRI GGCC 3 cut(s) 282, 361, 655
BtsCI GGATG 1 cut(s) 287
BtsI GCAGTG 2 cut(s) 23, 106
BtsIMutI CAGTG 4 cut(s) 23, 106, 196, 448
BveI ACCTGC 1 cut(s) 488
Cac8I GCNNGC 1 cut(s) 280
CaiI CAGNNNCTG 1 cut(s) 105
CciI TCATGA 1 cut(s) 521
Cfr13I GGNCC 3 cut(s) 281, 320, 636
Csp6I GTAC 1 cut(s) 435
CviAII CATG 4 cut(s) 162, 522, 608, 777
CviJI RGCY 9 cut(s) 41, 121, 156, 282, 361, 410, 612, 655, 732
CviKI_1 RGCY 9 cut(s) 41, 121, 156, 282, 361, 410, 612, 655, 732
CviQI GTAC 1 cut(s) 435
DdeI CTNAG 4 cut(s) 405, 529, 565, 800
DpnI GATC 1 cut(s) 390
DpnII GATC 1 cut(s) 388
DraI TTTAAA 1 cut(s) 151
Eco47I GGWCC 2 cut(s) 320, 636
Eco57I CTGAAG 2 cut(s) 598, 735
EcoO109I RGGNCCY 2 cut(s) 320, 636
FaeI CATG 4 cut(s) 165, 525, 611, 780
FaqI GGGAC 3 cut(s) 140, 553, 649
FatI CATG 4 cut(s) 161, 521, 607, 776
FbaI TGATCA 1 cut(s) 388
Fnu4HI GCNGC 2 cut(s) 119, 613
FokI GGATG 1 cut(s) 274
Fsp4HI GCNGC 2 cut(s) 119, 613
FspBI CTAG 3 cut(s) 510, 589, 640
GluI GCNGC 2 cut(s) 119, 613
GsaI CCCAGC 1 cut(s) 732
GsuI CTGGAG 1 cut(s) 127
HaeIII GGCC 3 cut(s) 282, 361, 655
HapII CCGG 1 cut(s) 291
Hin1II CATG 4 cut(s) 165, 525, 611, 780
HindIII AAGCTT 1 cut(s) 39
HinfI GANTC 4 cut(s) 30, 399, 571, 698
HpaII CCGG 1 cut(s) 291
HphI GGTGA 1 cut(s) 150
Hpy166II GTNNAC 2 cut(s) 740, 771
Hpy188I TCNGA 3 cut(s) 35, 406, 578
Hpy188III TCNNGA 3 cut(s) 291, 354, 522
Hpy8I GTNNAC 2 cut(s) 740, 771
HpyAV CCTTC 5 cut(s) 20, 108, 573, 725, 759
HpyCH4III ACNGT 3 cut(s) 269, 443, 764
HpyCH4V TGCA 3 cut(s) 214, 326, 615
HpyF10VI GCNNNNNNNGC 2 cut(s) 162, 684
HpyF3I CTNAG 4 cut(s) 405, 529, 565, 800
Hsp92II CATG 4 cut(s) 165, 525, 611, 780
Kpn2I TCCGGA 1 cut(s) 290
Ksp22I TGATCA 1 cut(s) 388
Kzo9I GATC 1 cut(s) 388
Lsp1109I GCAGC 2 cut(s) 130, 599
MaeI CTAG 3 cut(s) 510, 589, 640
MaeIII GTNAC 1 cut(s) 101
MalI GATC 1 cut(s) 390
MboI GATC 1 cut(s) 388
MboII GAAGA 1 cut(s) 123
MluCI AATT 4 cut(s) 198, 459, 492, 790
MlyI GAGTC 1 cut(s) 408
MroI TCCGGA 1 cut(s) 290
MseI TTAA 4 cut(s) 79, 150, 457, 550
MspI CCGG 1 cut(s) 291
Mva1269I GAATGC 1 cut(s) 615
MwoI GCNNNNNNNGC 2 cut(s) 162, 684
NdeII GATC 1 cut(s) 388
NlaIII CATG 4 cut(s) 165, 525, 611, 780
NlaIV GGNNCC 1 cut(s) 637
NmuCI GTSAC 1 cut(s) 101
PagI TCATGA 1 cut(s) 521
PctI GAATGC 1 cut(s) 615
PfeI GAWTC 3 cut(s) 30, 571, 698
PflMI CCANNNNNTGG 1 cut(s) 777
PkrI GCNGC 2 cut(s) 120, 614
PleI GAGTC 1 cut(s) 407
PpsI GAGTC 1 cut(s) 407
PpuMI RGGWCCY 2 cut(s) 320, 636
PsiI TTATAA 1 cut(s) 10
Psp5II RGGWCCY 2 cut(s) 320, 636
PspFI CCCAGC 1 cut(s) 728
PspN4I GGNNCC 1 cut(s) 637
PspPI GGNCC 3 cut(s) 281, 320, 636
PspPPI RGGWCCY 2 cut(s) 320, 636
PstI CTGCAG 1 cut(s) 328
PstNI CAGNNNCTG 1 cut(s) 105
RsaI GTAC 1 cut(s) 436
RsaNI GTAC 1 cut(s) 435
SaqAI TTAA 4 cut(s) 79, 150, 457, 550
SatI GCNGC 2 cut(s) 119, 613
Sau3AI GATC 1 cut(s) 388
Sau96I GGNCC 3 cut(s) 281, 320, 636
SchI GAGTC 1 cut(s) 408
SetI ASST 8 cut(s) 43, 123, 322, 472, 482, 530, 584, 641
SfcI CTRYAG 1 cut(s) 324
SinI GGWCC 2 cut(s) 320, 636
SmlI CTYRAG 1 cut(s) 42
SmoI CTYRAG 1 cut(s) 42
Sse9I AATT 4 cut(s) 198, 459, 492, 790
SspMI CTAG 3 cut(s) 510, 589, 640
TaaI ACNGT 3 cut(s) 269, 443, 764
TaqI TCGA 1 cut(s) 205
TasI AATT 4 cut(s) 198, 459, 492, 790
TfiI GAWTC 3 cut(s) 30, 571, 698
Tru1I TTAA 4 cut(s) 79, 150, 457, 550
Tru9I TTAA 4 cut(s) 79, 150, 457, 550
TscAI CASTG 4 cut(s) 23, 106, 196, 448
TseFI GTSAC 1 cut(s) 101
TseI GCWGC 2 cut(s) 118, 612
Tsp45I GTSAC 1 cut(s) 101
TspDTI ATGAA 4 cut(s) 187, 211, 507, 538
TspRI CASTG 4 cut(s) 23, 106, 196, 448
Van91I CCANNNNNTGG 1 cut(s) 777
VpaK11BI GGWCC 2 cut(s) 320, 636
XspI CTAG 3 cut(s) 510, 589, 640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.