Belongs to the cytochrome P450 family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ribosomal_L3 | PF00297 | 178 - 261 | 7.8e-17 | Ribosomal protein L3 |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 119 |
| AccBSI | CCGCTC | 1 cut(s) | 101 |
| AccII | CGCG | 1 cut(s) | 277 |
| AclWI | GGATC | 4 cut(s) | 773, 773, 914, 959 |
| AcuI | CTGAAG | 3 cut(s) | 127, 447, 846 |
| AcyI | GRCGYC | 1 cut(s) | 116 |
| AfaI | GTAC | 1 cut(s) | 85 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 318, 431 |
| AflII | CTTAAG | 1 cut(s) | 461 |
| AjnI | CCWGG | 3 cut(s) | 544, 810, 817 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 652, 684 |
| AluBI | AGCT | 2 cut(s) | 147, 446 |
| AluI | AGCT | 2 cut(s) | 147, 446 |
| Alw21I | GWGCWC | 1 cut(s) | 448 |
| Alw26I | GTCTC | 2 cut(s) | 343, 880 |
| AlwI | GGATC | 4 cut(s) | 773, 773, 914, 959 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 824 |
| Ama87I | CYCGRG | 1 cut(s) | 722 |
| AoxI | GGCC | 7 cut(s) | 19, 153, 168, 204, 433, 547, 808 |
| ApeKI | GCWGC | 1 cut(s) | 189 |
| AspLEI | GCGC | 4 cut(s) | 277, 279, 502, 729 |
| AspS9I | GGNCC | 4 cut(s) | 168, 240, 433, 814 |
| AsuC2I | CCSGG | 4 cut(s) | 194, 213, 723, 724 |
| AsuHPI | GGTGA | 3 cut(s) | 301, 763, 814 |
| AvaI | CYCGRG | 1 cut(s) | 722 |
| AvaII | GGWCC | 2 cut(s) | 240, 814 |
| BanII | GRGCYC | 1 cut(s) | 448 |
| BauI | CACGAG | 1 cut(s) | 574 |
| Bbv12I | GWGCWC | 1 cut(s) | 448 |
| BbvI | GCAGC | 1 cut(s) | 201 |
| BceAI | ACGGC | 1 cut(s) | 239 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 295, 329 |
| BciT130I | CCWGG | 3 cut(s) | 546, 812, 819 |
| BcnI | CCSGG | 4 cut(s) | 194, 213, 723, 724 |
| BcoDI | GTCTC | 2 cut(s) | 343, 880 |
| BfaI | CTAG | 1 cut(s) | 297 |
| BfmI | CTRYAG | 2 cut(s) | 380, 672 |
| BfrI | CTTAAG | 1 cut(s) | 461 |
| BisI | GCNGC | 3 cut(s) | 99, 190, 978 |
| BlsI | GCNGC | 3 cut(s) | 100, 191, 979 |
| Bme1390I | CCNGG | 7 cut(s) | 194, 213, 546, 723, 724, 812, 819 |
| Bme18I | GGWCC | 2 cut(s) | 240, 814 |
| BmeT110I | CYCGRG | 1 cut(s) | 722 |
| BmgT120I | GGNCC | 4 cut(s) | 168, 240, 433, 814 |
| BmiI | GGNNCC | 3 cut(s) | 169, 303, 816 |
| BmrFI | CCNGG | 7 cut(s) | 194, 213, 546, 723, 724, 812, 819 |
| BmsI | GCATC | 6 cut(s) | 128, 487, 679, 708, 841, 870 |
| BoxI | GACNNNNGTC | 1 cut(s) | 245 |
| BpmI | CTGGAG | 1 cut(s) | 891 |
| Bpu10I | CCTNAGC | 1 cut(s) | 447 |
| BpuMI | CCSGG | 4 cut(s) | 194, 213, 723, 724 |
| BsaBI | GATNNNNATC | 1 cut(s) | 918 |
| BsaHI | GRCGYC | 1 cut(s) | 116 |
| BsaJI | CCNNGG | 4 cut(s) | 150, 156, 722, 817 |
| BsaWI | WCCGGW | 2 cut(s) | 242, 657 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 652, 682 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 318, 431 |
| Bse8I | GATNNNNATC | 1 cut(s) | 918 |
| BseBI | CCWGG | 3 cut(s) | 546, 812, 819 |
| BseDI | CCNNGG | 4 cut(s) | 150, 156, 722, 817 |
| BseGI | GGATG | 3 cut(s) | 606, 856, 919 |
| BseJI | GATNNNNATC | 1 cut(s) | 918 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 318, 431 |
| BseMII | CTCAG | 2 cut(s) | 356, 461 |
| BsePI | GCGCGC | 1 cut(s) | 275 |
| BseRI | GAGGAG | 2 cut(s) | 32, 61 |
| BseXI | GCAGC | 1 cut(s) | 201 |
| BseYI | CCCAGC | 1 cut(s) | 279 |
| Bsh1236I | CGCG | 1 cut(s) | 277 |
| BshFI | GGCC | 7 cut(s) | 21, 155, 170, 206, 435, 549, 810 |
| BsiHKAI | GWGCWC | 1 cut(s) | 448 |
| BsiHKCI | CYCGRG | 1 cut(s) | 722 |
| BsiSI | CCGG | 5 cut(s) | 193, 213, 243, 658, 723 |
| BslFI | GGGAC | 2 cut(s) | 296, 800 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 318, 431 |
| BsmAI | GTCTC | 2 cut(s) | 343, 880 |
| BsmBI | CGTCTC | 1 cut(s) | 343 |
| BsmFI | GGGAC | 2 cut(s) | 296, 800 |
| BsmI | GAATGC | 1 cut(s) | 630 |
| BsnI | GGCC | 7 cut(s) | 21, 155, 170, 206, 435, 549, 810 |
| BsoBI | CYCGRG | 1 cut(s) | 722 |
| Bsp1286I | GDGCHC | 1 cut(s) | 448 |
| Bsp143I | GATC | 8 cut(s) | 174, 184, 306, 765, 778, 919, 949, 964 |
| BspANI | GGCC | 7 cut(s) | 21, 155, 170, 206, 435, 549, 810 |
| BspCNI | CTCAG | 2 cut(s) | 355, 460 |
| BspFNI | CGCG | 1 cut(s) | 277 |
| BspLI | GGNNCC | 3 cut(s) | 169, 303, 816 |
| BspPI | GGATC | 4 cut(s) | 773, 773, 914, 959 |
| BspTI | CTTAAG | 1 cut(s) | 461 |
| BsrBI | CCGCTC | 1 cut(s) | 101 |
| BssECI | CCNNGG | 4 cut(s) | 150, 156, 722, 817 |
| BssHII | GCGCGC | 1 cut(s) | 275 |
| BssMI | GATC | 8 cut(s) | 174, 184, 306, 765, 778, 919, 949, 964 |
| BssNI | GRCGYC | 1 cut(s) | 116 |
| BssSI | CACGAG | 1 cut(s) | 574 |
| BssT1I | CCWWGG | 1 cut(s) | 156 |
| Bst2BI | CACGAG | 1 cut(s) | 574 |
| Bst2UI | CCWGG | 3 cut(s) | 546, 812, 819 |
| Bst4CI | ACNGT | 2 cut(s) | 313, 751 |
| Bst6I | CTCTTC | 1 cut(s) | 79 |
| BstACI | GRCGYC | 1 cut(s) | 116 |
| BstAFI | CTTAAG | 1 cut(s) | 461 |
| BstC8I | GCNNGC | 3 cut(s) | 277, 395, 630 |
| BstDEI | CTNAG | 3 cut(s) | 342, 447, 648 |
| BstF5I | GGATG | 3 cut(s) | 606, 856, 919 |
| BstFNI | CGCG | 1 cut(s) | 277 |
| BstHHI | GCGC | 4 cut(s) | 277, 279, 502, 729 |
| BstKTI | GATC | 8 cut(s) | 177, 187, 309, 768, 781, 922, 952, 967 |
| BstMAI | GTCTC | 2 cut(s) | 343, 880 |
| BstMBI | GATC | 8 cut(s) | 174, 184, 306, 765, 778, 919, 949, 964 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 95, 104, 176 |
| BstNI | CCWGG | 3 cut(s) | 546, 812, 819 |
| BstNSI | RCATGY | 1 cut(s) | 271 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 245 |
| BstSCI | CCNGG | 7 cut(s) | 192, 211, 544, 721, 722, 810, 817 |
| BstSFI | CTRYAG | 2 cut(s) | 380, 672 |
| BstUI | CGCG | 1 cut(s) | 277 |
| BstV1I | GCAGC | 1 cut(s) | 201 |
| BstX2I | RGATCY | 3 cut(s) | 765, 919, 964 |
| BstYI | RGATCY | 3 cut(s) | 765, 919, 964 |
| BsuRI | GGCC | 7 cut(s) | 21, 155, 170, 206, 435, 549, 810 |
| BtgZI | GCGATG | 1 cut(s) | 235 |
| BtsCI | GGATG | 3 cut(s) | 606, 856, 919 |
| Cac8I | GCNNGC | 3 cut(s) | 277, 395, 630 |
| CaiI | CAGNNNCTG | 1 cut(s) | 824 |
| CfoI | GCGC | 4 cut(s) | 277, 279, 502, 729 |
| Cfr13I | GGNCC | 4 cut(s) | 168, 240, 433, 814 |
| Cfr9I | CCCGGG | 1 cut(s) | 722 |
| CpoI | CGGWCCG | 1 cut(s) | 240 |
| Csp6I | GTAC | 1 cut(s) | 84 |
| CspI | CGGWCCG | 1 cut(s) | 240 |
| CviAII | CATG | 3 cut(s) | 268, 638, 730 |
| CviQI | GTAC | 1 cut(s) | 84 |
| DdeI | CTNAG | 3 cut(s) | 342, 447, 648 |
| DpnI | GATC | 8 cut(s) | 176, 186, 308, 767, 780, 921, 951, 966 |
| DpnII | GATC | 8 cut(s) | 174, 184, 306, 765, 778, 919, 949, 964 |
| DraI | TTTAAA | 1 cut(s) | 706 |
| Eam1104I | CTCTTC | 1 cut(s) | 79 |
| EarI | CTCTTC | 1 cut(s) | 79 |
| EciI | GGCGGA | 1 cut(s) | 26 |
| Ecl136II | GAGCTC | 1 cut(s) | 446 |
| Eco130I | CCWWGG | 1 cut(s) | 156 |
| Eco147I | AGGCCT | 2 cut(s) | 21, 155 |
| Eco24I | GRGCYC | 1 cut(s) | 448 |
| Eco47I | GGWCC | 2 cut(s) | 240, 814 |
| Eco53kI | GAGCTC | 1 cut(s) | 446 |
| Eco57I | CTGAAG | 3 cut(s) | 127, 447, 846 |
| Eco88I | CYCGRG | 1 cut(s) | 722 |
| EcoICRI | GAGCTC | 1 cut(s) | 446 |
| EcoO109I | RGGNCCY | 1 cut(s) | 814 |
| EcoRII | CCWGG | 3 cut(s) | 544, 810, 817 |
| EcoT14I | CCWWGG | 1 cut(s) | 156 |
| EcoT38I | GRGCYC | 1 cut(s) | 448 |
| ErhI | CCWWGG | 1 cut(s) | 156 |
| Esp3I | CGTCTC | 1 cut(s) | 343 |
| FaeI | CATG | 3 cut(s) | 271, 641, 733 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 486, 518 |
| FaqI | GGGAC | 2 cut(s) | 296, 800 |
| FatI | CATG | 3 cut(s) | 267, 637, 729 |
| FauI | CCCGC | 6 cut(s) | 38, 64, 103, 386, 468, 790 |
| Fnu4HI | GCNGC | 3 cut(s) | 99, 190, 978 |
| FokI | GGATG | 3 cut(s) | 613, 863, 926 |
| FriOI | GRGCYC | 1 cut(s) | 448 |
| Fsp4HI | GCNGC | 3 cut(s) | 99, 190, 978 |
| FspBI | CTAG | 1 cut(s) | 297 |
| GlaI | GCGC | 4 cut(s) | 276, 278, 501, 728 |
| GluI | GCNGC | 3 cut(s) | 99, 190, 978 |
| GsaI | CCCAGC | 1 cut(s) | 283 |
| GsuI | CTGGAG | 1 cut(s) | 891 |
| HaeIII | GGCC | 7 cut(s) | 21, 155, 170, 206, 435, 549, 810 |
| HapII | CCGG | 5 cut(s) | 193, 213, 243, 658, 723 |
| HhaI | GCGC | 4 cut(s) | 277, 279, 502, 729 |
| Hin1I | GRCGYC | 1 cut(s) | 116 |
| Hin1II | CATG | 3 cut(s) | 271, 641, 733 |
| Hin6I | GCGC | 4 cut(s) | 275, 277, 500, 727 |
| HinP1I | GCGC | 4 cut(s) | 275, 277, 500, 727 |
| HinfI | GANTC | 3 cut(s) | 246, 369, 570 |
| HpaII | CCGG | 5 cut(s) | 193, 213, 243, 658, 723 |
| HphI | GGTGA | 3 cut(s) | 301, 763, 814 |
| Hpy166II | GTNNAC | 1 cut(s) | 163 |
| Hpy188I | TCNGA | 6 cut(s) | 137, 151, 306, 417, 443, 681 |
| Hpy188III | TCNNGA | 4 cut(s) | 15, 574, 877, 908 |
| Hpy8I | GTNNAC | 1 cut(s) | 163 |
| Hpy99I | CGWCG | 2 cut(s) | 118, 121 |
| HpyAV | CCTTC | 3 cut(s) | 359, 690, 821 |
| HpyCH4III | ACNGT | 2 cut(s) | 313, 751 |
| HpyCH4IV | ACGT | 1 cut(s) | 116 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 95, 104, 176 |
| HpyF3I | CTNAG | 3 cut(s) | 342, 447, 648 |
| HpySE526I | ACGT | 1 cut(s) | 116 |
| Hsp92I | GRCGYC | 1 cut(s) | 116 |
| Hsp92II | CATG | 3 cut(s) | 271, 641, 733 |
| HspAI | GCGC | 4 cut(s) | 275, 277, 500, 727 |
| Kzo9I | GATC | 8 cut(s) | 174, 184, 306, 765, 778, 919, 949, 964 |
| LmnI | GCTCC | 2 cut(s) | 152, 910 |
| Lsp1109I | GCAGC | 1 cut(s) | 201 |
| LweI | GCATC | 6 cut(s) | 128, 487, 679, 708, 841, 870 |
| MaeI | CTAG | 1 cut(s) | 297 |
| MaeII | ACGT | 1 cut(s) | 116 |
| MaeIII | GTNAC | 3 cut(s) | 487, 562, 651 |
| MalI | GATC | 8 cut(s) | 176, 186, 308, 767, 780, 921, 951, 966 |
| MbiI | CCGCTC | 1 cut(s) | 101 |
| MboI | GATC | 8 cut(s) | 174, 184, 306, 765, 778, 919, 949, 964 |
| MboII | GAAGA | 6 cut(s) | 57, 66, 124, 194, 506, 929 |
| MfeI | CAATTG | 1 cut(s) | 522 |
| MflI | RGATCY | 3 cut(s) | 765, 919, 964 |
| MhlI | GDGCHC | 1 cut(s) | 448 |
| MluCI | AATT | 2 cut(s) | 522, 774 |
| MlyI | GAGTC | 1 cut(s) | 255 |
| MmeI | TCCRAC | 1 cut(s) | 917 |
| MseI | TTAA | 2 cut(s) | 462, 705 |
| MspA1I | CMGCKG | 1 cut(s) | 940 |
| MspCI | CTTAAG | 1 cut(s) | 461 |
| MspI | CCGG | 5 cut(s) | 193, 213, 243, 658, 723 |
| MspR9I | CCNGG | 7 cut(s) | 194, 213, 546, 723, 724, 812, 819 |
| MunI | CAATTG | 1 cut(s) | 522 |
| Mva1269I | GAATGC | 1 cut(s) | 630 |
| MvaI | CCWGG | 3 cut(s) | 546, 812, 819 |
| MvnI | CGCG | 1 cut(s) | 277 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 95, 104, 176 |
| NciI | CCSGG | 4 cut(s) | 194, 213, 723, 724 |
| NdeII | GATC | 8 cut(s) | 174, 184, 306, 765, 778, 919, 949, 964 |
| NlaIII | CATG | 3 cut(s) | 271, 641, 733 |
| NlaIV | GGNNCC | 3 cut(s) | 169, 303, 816 |
| NmeAIII | GCCGAG | 1 cut(s) | 196 |
| NmuCI | GTSAC | 1 cut(s) | 651 |
| NspI | RCATGY | 1 cut(s) | 271 |
| PauI | GCGCGC | 1 cut(s) | 275 |
| PceI | AGGCCT | 2 cut(s) | 21, 155 |
| PctI | GAATGC | 1 cut(s) | 630 |
| PfeI | GAWTC | 2 cut(s) | 369, 570 |
| PkrI | GCNGC | 3 cut(s) | 100, 191, 979 |
| PleI | GAGTC | 1 cut(s) | 254 |
| PpsI | GAGTC | 1 cut(s) | 254 |
| PpuMI | RGGWCCY | 1 cut(s) | 814 |
| PshAI | GACNNNNGTC | 1 cut(s) | 245 |
| Psp124BI | GAGCTC | 1 cut(s) | 448 |
| Psp5II | RGGWCCY | 1 cut(s) | 814 |
| Psp6I | CCWGG | 3 cut(s) | 544, 810, 817 |
| PspFI | CCCAGC | 1 cut(s) | 279 |
| PspGI | CCWGG | 3 cut(s) | 544, 810, 817 |
| PspN4I | GGNNCC | 3 cut(s) | 169, 303, 816 |
| PspPI | GGNCC | 4 cut(s) | 168, 240, 433, 814 |
| PspPPI | RGGWCCY | 1 cut(s) | 814 |
| PstNI | CAGNNNCTG | 1 cut(s) | 824 |
| PsuI | RGATCY | 3 cut(s) | 765, 919, 964 |
| PteI | GCGCGC | 1 cut(s) | 275 |
| RsaI | GTAC | 1 cut(s) | 85 |
| RsaNI | GTAC | 1 cut(s) | 84 |
| Rsr2I | CGGWCCG | 1 cut(s) | 240 |
| RsrII | CGGWCCG | 1 cut(s) | 240 |
| SacI | GAGCTC | 1 cut(s) | 448 |
| SaqAI | TTAA | 2 cut(s) | 462, 705 |
| SatI | GCNGC | 3 cut(s) | 99, 190, 978 |
| Sau3AI | GATC | 8 cut(s) | 174, 184, 306, 765, 778, 919, 949, 964 |
| Sau96I | GGNCC | 4 cut(s) | 168, 240, 433, 814 |
| SchI | GAGTC | 1 cut(s) | 255 |
| ScrFI | CCNGG | 7 cut(s) | 194, 213, 546, 723, 724, 812, 819 |
| SduI | GDGCHC | 1 cut(s) | 448 |
| SetI | ASST | 9 cut(s) | 119, 149, 348, 448, 589, 611, 679, 816, 823 |
| SfaNI | GCATC | 6 cut(s) | 128, 487, 679, 708, 841, 870 |
| SfcI | CTRYAG | 2 cut(s) | 380, 672 |
| SinI | GGWCC | 2 cut(s) | 240, 814 |
| SmaI | CCCGGG | 1 cut(s) | 724 |
| SmlI | CTYRAG | 1 cut(s) | 461 |
| SmoI | CTYRAG | 1 cut(s) | 461 |
| SrfI | GCCCGGGC | 1 cut(s) | 724 |
| Sse9I | AATT | 2 cut(s) | 522, 774 |
| SseBI | AGGCCT | 2 cut(s) | 21, 155 |
| SspMI | CTAG | 1 cut(s) | 297 |
| SstI | GAGCTC | 1 cut(s) | 448 |
| StuI | AGGCCT | 2 cut(s) | 21, 155 |
| StyD4I | CCNGG | 7 cut(s) | 192, 211, 544, 721, 722, 810, 817 |
| StyI | CCWWGG | 1 cut(s) | 156 |
| TaaI | ACNGT | 2 cut(s) | 313, 751 |
| TaiI | ACGT | 1 cut(s) | 119 |
| TaqI | TCGA | 5 cut(s) | 14, 201, 233, 324, 878 |
| TasI | AATT | 2 cut(s) | 522, 774 |
| TauI | GCSGC | 2 cut(s) | 101, 980 |
| TfiI | GAWTC | 2 cut(s) | 369, 570 |
| Tru1I | TTAA | 2 cut(s) | 462, 705 |
| Tru9I | TTAA | 2 cut(s) | 462, 705 |
| TseFI | GTSAC | 1 cut(s) | 651 |
| TseI | GCWGC | 1 cut(s) | 189 |
| Tsp45I | GTSAC | 1 cut(s) | 651 |
| TspDTI | ATGAA | 2 cut(s) | 617, 930 |
| TspMI | CCCGGG | 1 cut(s) | 722 |
| Vha464I | CTTAAG | 1 cut(s) | 461 |
| VpaK11BI | GGWCC | 2 cut(s) | 240, 814 |
| XceI | RCATGY | 1 cut(s) | 271 |
| XmaI | CCCGGG | 1 cut(s) | 722 |
| XspI | CTAG | 1 cut(s) | 297 |
| ZraI | GACGTC | 1 cut(s) | 117 |