Rmu_sc0002137.1_g000019

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002137.1
Physical Location & Seq
Forward (+)
76779 .. 77764
986 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002137.1_g000019.1.cds

Sequence Viewer

Length: 879 bp
atgcaatgttgtaggaggattatgtatgttcctatttctcatgtttatttcattccatattgcagaaagctttttaaaactagtgatgaaattcaagcagaaaagcttgagaaggaaatacgtgacatgatattggagactgtaaagaaaagagaaaacaaggcagtgagtcagcaagatgaacacaactttggtggggattttcttggattacttttaaaggctcatcatgatgacagtaatgacgaatatagggtcacgatagatgatataattgatcagtgtaaggcaatgtactttgctggacaagaaaccactaatggtttgctggtttggaccgtgtttcttctggcactccatcaggattggcaaaaggaagcgagaaaagaagtcctgcatctatttggaaaacataatccaaatttcgatggcatttccagactaaaaactatgaatatgatcctcaatgagtctctaaggttatatcctcctgtcagtcaacttacaaagattactgaaagggaaagcaggctggggaagttgattgttcctgctaatattgatgtagtcgtcccaactttagcacttcaccatgaccctcaaacatggggacaagacgtggaagttttcaaaccagagcggttctcagaaggggttgctaaagctaccaaggataacatggctgcattcataccctttggaatgggacctagaatttgtgtgggtttcaaccttgccaccactgaaactaagattgctctgtcaatgattctgcaacgctactccttcactctttccccgggttacgttcactctcctcttcattttcttacaactcgcccacagcatggagttcaagtaatgctacactccctgtga

Protein Analysis

292

Amino Acids

33.54

Weight (kDa)

7.22

Isoelectric Point (pI)

32.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 848
AccBSI CCGCTC 1 cut(s) 640
AciI CCGC 1 cut(s) 640
AclWI GGATC 1 cut(s) 454
AcsI RAATTY 3 cut(s) 90, 421, 714
AfaI GTAC 1 cut(s) 296
AfiI CCNNNNNNNGG 1 cut(s) 848
AgsI TTSAA 4 cut(s) 95, 631, 730, 857
AhlI ACTAGT 1 cut(s) 80
AjiI CACGTC 1 cut(s) 619
AjuI GAANNNNNNNTTGG 2 cut(s) 174, 206
AluBI AGCT 3 cut(s) 70, 106, 665
AluI AGCT 3 cut(s) 70, 106, 665
Alw26I GTCTC 2 cut(s) 131, 477
AlwI GGATC 1 cut(s) 454
Ama87I CYCGRG 1 cut(s) 799
ApeKI GCWGC 1 cut(s) 683
ApoI RAATTY 3 cut(s) 90, 421, 714
ArsI GACNNNNNNTTYG 4 cut(s) 240, 272, 699, 731
AspS9I GGNCC 2 cut(s) 336, 707
AsuC2I CCSGG 2 cut(s) 800, 801
AsuHPI GGTGA 1 cut(s) 581
AvaI CYCGRG 1 cut(s) 799
AvaII GGWCC 2 cut(s) 336, 707
BbvI GCAGC 1 cut(s) 670
BccI CCATC 2 cut(s) 366, 422
BclI TGATCA 1 cut(s) 277
BcnI CCSGG 2 cut(s) 800, 801
BcoDI GTCTC 2 cut(s) 131, 477
BcuI ACTAGT 1 cut(s) 80
BfaI CTAG 2 cut(s) 81, 711
BisI GCNGC 1 cut(s) 684
BlsI GCNGC 1 cut(s) 685
Bme1390I CCNGG 2 cut(s) 800, 801
Bme18I GGWCC 2 cut(s) 336, 707
BmeT110I CYCGRG 1 cut(s) 799
BmgBI CACGTC 1 cut(s) 619
BmgT120I GGNCC 2 cut(s) 336, 707
BmiI GGNNCC 1 cut(s) 708
BmrFI CCNGG 2 cut(s) 800, 801
BmsI GCATC 1 cut(s) 406
BplI GAGNNNNNCTC 2 cut(s) 629, 661
BpuEI CTTGAG 1 cut(s) 128
BpuMI CCSGG 2 cut(s) 800, 801
BsaAI YACGTR 1 cut(s) 122
BsaJI CCNNGG 3 cut(s) 669, 798, 799
BsaXI ACNNNNNCTCC 2 cut(s) 843, 873
Bsc4I CCNNNNNNNGG 1 cut(s) 848
Bse3DI GCAATG 2 cut(s) 11, 297
BseDI CCNNGG 3 cut(s) 669, 798, 799
BseLI CCNNNNNNNGG 1 cut(s) 848
BseMI GCAATG 2 cut(s) 11, 297
BseMII CTCAG 1 cut(s) 660
BseRI GAGGAG 1 cut(s) 807
BseXI GCAGC 1 cut(s) 670
BseYI CCCAGC 1 cut(s) 532
BsiHKCI CYCGRG 1 cut(s) 799
BsiSI CCGG 1 cut(s) 800
BslFI GGGAC 3 cut(s) 557, 624, 720
BslI CCNNNNNNNGG 1 cut(s) 848
BsmAI GTCTC 2 cut(s) 131, 477
BsmFI GGGAC 3 cut(s) 557, 624, 720
BsmI GAATGC 1 cut(s) 686
BsoBI CYCGRG 1 cut(s) 799
Bsp143I GATC 2 cut(s) 277, 459
BspACI CCGC 1 cut(s) 640
BspCNI CTCAG 1 cut(s) 659
BspHI TCATGA 1 cut(s) 229
BspLI GGNNCC 1 cut(s) 708
BspPI GGATC 1 cut(s) 454
BsrBI CCGCTC 1 cut(s) 640
BsrDI GCAATG 2 cut(s) 11, 297
BssECI CCNNGG 3 cut(s) 669, 798, 799
BssMI GATC 2 cut(s) 277, 459
BssT1I CCWWGG 1 cut(s) 669
Bst4CI ACNGT 3 cut(s) 142, 239, 340
Bst6I CTCTTC 1 cut(s) 825
BstBAI YACGTR 1 cut(s) 122
BstC8I GCNNGC 1 cut(s) 530
BstDEI CTNAG 3 cut(s) 476, 646, 750
BstKTI GATC 2 cut(s) 280, 462
BstMAI GTCTC 2 cut(s) 131, 477
BstMBI GATC 2 cut(s) 277, 459
BstSCI CCNGG 2 cut(s) 798, 799
BstV1I GCAGC 1 cut(s) 670
BtrI CACGTC 1 cut(s) 619
BtsI GCAGTG 1 cut(s) 171
BtsIMutI CAGTG 3 cut(s) 171, 287, 741
Cac8I GCNNGC 1 cut(s) 530
CciI TCATGA 1 cut(s) 229
Cfr13I GGNCC 2 cut(s) 336, 707
Cfr9I CCCGGG 1 cut(s) 799
Csp6I GTAC 1 cut(s) 295
CspCI CAANNNNNGTGG 2 cut(s) 175, 210
CviAII CATG 7 cut(s) 41, 127, 230, 593, 606, 679, 848
CviJI RGCY 6 cut(s) 70, 106, 224, 532, 665, 683
CviKI_1 RGCY 6 cut(s) 70, 106, 224, 532, 665, 683
CviQI GTAC 1 cut(s) 295
DdeI CTNAG 3 cut(s) 476, 646, 750
DpnI GATC 2 cut(s) 279, 461
DpnII GATC 2 cut(s) 277, 459
DraI TTTAAA 2 cut(s) 76, 219
Eam1104I CTCTTC 1 cut(s) 825
EarI CTCTTC 1 cut(s) 825
Eco130I CCWWGG 1 cut(s) 669
Eco47I GGWCC 2 cut(s) 336, 707
Eco88I CYCGRG 1 cut(s) 799
EcoO109I RGGNCCY 1 cut(s) 707
EcoT14I CCWWGG 1 cut(s) 669
ErhI CCWWGG 1 cut(s) 669
FaeI CATG 7 cut(s) 44, 130, 233, 596, 609, 682, 851
FaqI GGGAC 3 cut(s) 557, 624, 720
FatI CATG 7 cut(s) 40, 126, 229, 592, 605, 678, 847
FbaI TGATCA 1 cut(s) 277
Fnu4HI GCNGC 1 cut(s) 684
Fsp4HI GCNGC 1 cut(s) 684
FspBI CTAG 2 cut(s) 81, 711
GluI GCNGC 1 cut(s) 684
GsaI CCCAGC 1 cut(s) 536
HapII CCGG 1 cut(s) 800
Hin1II CATG 7 cut(s) 44, 130, 233, 596, 609, 682, 851
HincII GTYRAC 1 cut(s) 500
HindII GTYRAC 1 cut(s) 500
HindIII AAGCTT 2 cut(s) 68, 104
HinfI GANTC 3 cut(s) 169, 470, 769
HpaII CCGG 1 cut(s) 800
HphI GGTGA 1 cut(s) 581
Hpy166II GTNNAC 2 cut(s) 500, 811
Hpy188I TCNGA 1 cut(s) 649
Hpy188III TCNNGA 4 cut(s) 230, 259, 362, 438
Hpy8I GTNNAC 2 cut(s) 500, 811
HpyAV CCTTC 3 cut(s) 106, 644, 796
HpyCH4III ACNGT 3 cut(s) 142, 239, 340
HpyCH4IV ACGT 3 cut(s) 121, 618, 807
HpyCH4V TGCA 5 cut(s) 4, 63, 397, 686, 775
HpyF3I CTNAG 3 cut(s) 476, 646, 750
HpySE526I ACGT 3 cut(s) 121, 618, 807
Hsp92II CATG 7 cut(s) 44, 130, 233, 596, 609, 682, 851
Ksp22I TGATCA 1 cut(s) 277
Kzo9I GATC 2 cut(s) 277, 459
Lsp1109I GCAGC 1 cut(s) 670
LweI GCATC 1 cut(s) 406
MaeI CTAG 2 cut(s) 81, 711
MaeII ACGT 3 cut(s) 121, 618, 807
MaeIII GTNAC 3 cut(s) 122, 256, 803
MalI GATC 2 cut(s) 279, 461
MbiI CCGCTC 1 cut(s) 640
MboI GATC 2 cut(s) 277, 459
MboII GAAGA 2 cut(s) 338, 812
MluCI AATT 4 cut(s) 90, 273, 421, 714
MlyI GAGTC 2 cut(s) 178, 479
MnlI CCTC 5 cut(s) 9, 473, 498, 609, 828
MseI TTAA 2 cut(s) 75, 218
MslI CAYNNNNRTG 1 cut(s) 231
MspI CCGG 1 cut(s) 800
MspR9I CCNGG 2 cut(s) 800, 801
Mva1269I GAATGC 1 cut(s) 686
NciI CCSGG 2 cut(s) 800, 801
NdeII GATC 2 cut(s) 277, 459
NlaIII CATG 7 cut(s) 44, 130, 233, 596, 609, 682, 851
NlaIV GGNNCC 1 cut(s) 708
NmuCI GTSAC 2 cut(s) 122, 256
PagI TCATGA 1 cut(s) 229
PctI GAATGC 1 cut(s) 686
PfeI GAWTC 1 cut(s) 769
PflMI CCANNNNNTGG 1 cut(s) 848
PkrI GCNGC 1 cut(s) 685
PleI GAGTC 2 cut(s) 177, 478
PpsI GAGTC 2 cut(s) 177, 478
Ppu21I YACGTR 1 cut(s) 122
PpuMI RGGWCCY 1 cut(s) 707
Psp5II RGGWCCY 1 cut(s) 707
PspFI CCCAGC 1 cut(s) 532
PspN4I GGNNCC 1 cut(s) 708
PspPI GGNCC 2 cut(s) 336, 707
PspPPI RGGWCCY 1 cut(s) 707
RsaI GTAC 1 cut(s) 296
RsaNI GTAC 1 cut(s) 295
RseI CAYNNNNRTG 1 cut(s) 231
SaqAI TTAA 2 cut(s) 75, 218
SatI GCNGC 1 cut(s) 684
Sau3AI GATC 2 cut(s) 277, 459
Sau96I GGNCC 2 cut(s) 336, 707
SchI GAGTC 2 cut(s) 178, 479
ScrFI CCNGG 2 cut(s) 800, 801
SetI ASST 9 cut(s) 72, 108, 124, 482, 621, 667, 712, 735, 810
SfaNI GCATC 1 cut(s) 406
SinI GGWCC 2 cut(s) 336, 707
SmaI CCCGGG 1 cut(s) 801
SmiMI CAYNNNNRTG 1 cut(s) 231
SmlI CTYRAG 1 cut(s) 107
SmoI CTYRAG 1 cut(s) 107
SpeI ACTAGT 1 cut(s) 80
Sse9I AATT 4 cut(s) 90, 273, 421, 714
SsiI CCGC 1 cut(s) 640
SspI AATATT 1 cut(s) 559
SspMI CTAG 2 cut(s) 81, 711
StyD4I CCNGG 2 cut(s) 798, 799
StyI CCWWGG 1 cut(s) 669
TaaI ACNGT 3 cut(s) 142, 239, 340
TaiI ACGT 3 cut(s) 124, 621, 810
TaqI TCGA 1 cut(s) 426
TasI AATT 4 cut(s) 90, 273, 421, 714
TatI WGTACW 1 cut(s) 294
TfiI GAWTC 1 cut(s) 769
Tru1I TTAA 2 cut(s) 75, 218
Tru9I TTAA 2 cut(s) 75, 218
TscAI CASTG 3 cut(s) 171, 287, 748
TseFI GTSAC 2 cut(s) 122, 256
TseI GCWGC 1 cut(s) 683
Tsp45I GTSAC 2 cut(s) 122, 256
TspDTI ATGAA 6 cut(s) 40, 102, 195, 467, 679, 812
TspMI CCCGGG 1 cut(s) 799
TspRI CASTG 3 cut(s) 171, 287, 748
Van91I CCANNNNNTGG 1 cut(s) 848
VpaK11BI GGWCC 2 cut(s) 336, 707
XapI RAATTY 3 cut(s) 90, 421, 714
XcmI CCANNNNNNNNNTGG 1 cut(s) 676
XmaI CCCGGG 1 cut(s) 799
XspI CTAG 2 cut(s) 81, 711
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.