Rw1G013580

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
30352678 .. 30358117
5440 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G013580.1

Sequence Viewer

Length: 3090 bp
ATGATGAGTTGGTTGGCAGACCCATTAACCAACTTCTTCAGCTTCTTGAGTGTGTTGCTTCTCTTAGCTCTGATCAAGGCCTTTCACAAACTATGGTGGACTCCGACTCGCATTCAGAACCTGATGGCTGTGCAGGGAATTCATGGTCCTCCTTACAGACTTATTTATGGGAACACCAAGGAAATCTCCAACATGCAAAAGGAAGCGATGAGCAGGTCCATAAATCTATCACATGATATATTTCCTAGAGTTCAACCTCATATTCACTCATGGACCAAGAGCTATGGGAAGAATTATCTTCAATGGTATGGTCTTCGACCTATTTTGGTGGTTACAGAACCTGAATTGTGCAGAGAGATCCTCAATAACAAAGATGGGGTTTTCCCAAAACAGAAGCCGAGTAACTTTTTGAAGAAGCTGGTAGGAGATTGCATTTCCATCACAGAAGGTGAAAAGTGGGCAAAGTTGAGAAAGTTGTCCAACCATGCCTTTCATGGAAAGAGCTTAACAAATATGTTCCCAGACATGATAGCTAGTGCCGACGCGATGGTAGAAAGGTGGAAAAATCATGAAGGGAAGGAAATTGATGTGTATGAAGAATTTAGATTGTTCACTTCGGAAGTGATATCTAGGACAGCATTTGGCAGCAGCTACTTAGAAGGACAGAACATTTTTGAAATGATGATGAAGTTTTACCCTTTATTGTTCAAAAGCCTTCTCAAAGTCAGGTTTCCTGGAATGAGCAAGGTTTTTAGAACCAGTGATGAAATTGAATCAGACAAGCTTGAGAAAGAAATACGGGACTCCATAATGGAGATGGTTAAGAAAAGAGAACAAAAGGCAGTGACTATGAGTGGGGAAGAAGAAAGCTTGGGAAGTGATTTTCTAGGATTGCTTTTGAAGGCTCATCATGGTGCCAATGAGAAAAATCGGATTTCAATGAACGAATTAGTTGAAGAGTGCAGGATATTTTACTTTGCTGGACAAGAGACCACCAATACTCTACTTGCTTGGACTGTTGTTCTTCTGGGACGACATCAAGAATGGCAAGAGGAAGCGAGAAAAGAAGTCCTACAATTATTTGGGAAACAAAATCCAAATCCTGATGGCATTTCAAAACTCAAAATAATGAGCATGATCATCAATGAGACTCTAAGGCTGTATACTCCTGCTGATCTGATGGGAAGGACAGTTGCAAGGGAAGTTAGACTGGGAAAACTCCTACTTCCTGCAAATGTTGAATTGCATGTCCCACCTTTAGCACTTCACCATGATCCTCAGTTATGGGGACAAGATGCTGCACTTTTTAAACCAGAACGATTCTCTGAAGGGGTTGCTAAAGCTACAAAGGATAATATGGCCTCATTCATGCCATTTGGATTGGGACCTAGAATGTGTGTGGGTATCAACTTTGCTGTCACTGAAGCAAAGATTGCTCTGTCAATGATTCTACAACGCTACTCATTTACCCTTTCCCCAGGTTATGTCCACTCGCCTTCTCAGTTTCTTACTATTCGTCCACAACATGGAGTTCAAATGAGTTCTTTGGGAGGCCTAGTATTCATTCTTTTAAGTATTCTGTTTTTGTTCCTTCTCTTAGTTCTGATCAAGATCTTTCACAAACTATGGTGGAATCCGACTCGCATACAGAAGCTGATGGCTTTGCAAGGAATCAAAGGTCCTTCTTACAGATTTATCCATGGAAATACTAAAGAAATCTCCAGCATGCAAAAGGAAGCCATGAGCAGGCCCAAAAGTTTGTCACATGATATATTTTCTCATGTTCAACCTCATTTCTACTTATGGAGCAGGGCGTATGGGAAGAATTTTCTTCAATGGCATGGTTCTCGAGCTCAATTGGTCATTACAGAACCTGAGTTGTGCAAAGAGATACTAAATAACAAAGACAGAACTTTCTTGAAAACCGATTTCCCAATATTTATGAAGAAGCTATTGGGAGATGGACTTGTTACAACTGAAGGTGAAAAATGGGGAAGAATGCGAAAGCTGGCCAACTCTGCTTTCCATGGAGAGAGCTTAAAGAGTCTGATTCCTGCAACTATAGCTAGTGTTGAGTTGATGCTAGAGAGGTGGAAAAATCATGAAGGGAAAGAGATTGAGATATTTGAAGAATTTAGGTTGTTGACATCAGAATTGATTTCCAGAACAGCATTTGGCAGCAGCTACTCAGAAGGGAAGAGCATCTTTGACATGTTGATGAAGTTAGCCTTCTTAACATTCAAAAATGCTTTCAAAGCTAGGTTTCCTATCATCAGTAACATTTTCAAAACCAGCGATGATATTGAAGCAGAGAAGCTTGAGAAAGGAGTACGTGACTCTATAATAGAGATTGTCAAGAAAAGAGAACAGAAGGCAATGACTATGAGTGAGGAAGAAAAAAGTTTTGGGAGTGATTTTCTTGGATTACTTTTGAAAGCTCATCATGATGTCGATGGCAACCAGAGGATTACAGTGGATGATCTAGTTGATGAGTGCAAGACATTTTACTTTGCTGGACAAGAAACCACCAACAGTTTGCTAGCTTGGACTGTGTTTCTTCTGGCACTCCATACAGATTGGCAAAAGGAAGCAAGAAAAGAAGTCCTGCAATTATTCGGCAAACAAACTCCAAACCCTGATGGCATTTCCAAATTAAAAACAATGGGTATGATCATCAATGAGTCTCTAAGGTTATATCCTCCTGTTGTGTCCATTTATAGGAAAGTCGCACGAGAAGTTAGACTCGGAAAACTCCTTGTTCCAGCTGATCTTGAAATTCTTATTCCATGTTTGGCCCTTCAGCATGAGCCTCAATTCTGGGGACAAGATGTGGAATTGTTCAAACCAGAGAGATTCTCAGAAGGGGTTGCTAAAGCTACCAACAATAACATGGCCACATTCTTACCCTTTGGAATGGGACCTAGAAATTGTGTGGGATACAACTTTGCAACCACTGAAGCCAAGATTGCTCTGGCAATGATTCTGCAACGCTACACCTTCACACTTTCCCCGTGTTATGTTCACTCACCCTTTCGGCTTCTTACAGTTCGGCCACAGCATGGAATTCAAGTAATGCTACACTCACTCTGA

Protein Analysis

1029

Amino Acids

117.93

Weight (kDa)

9.16

Isoelectric Point (pI)

37.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 88 - 495 2.7e-77 Cytochrome P450
p450 PF00067 602 - 1004 3.5e-74 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 204
AccB1I GGYRCC 1 cut(s) 914
AccB7I CCANNNNNTGG 2 cut(s) 1526, 3059
AccI GTMKAC 1 cut(s) 1163
AccII CGCG 1 cut(s) 545
AclWI GGATC 2 cut(s) 352, 1268
AcoI YGGCCR 3 cut(s) 2010, 2892, 3050
AcsI RAATTY 6 cut(s) 138, 599, 1825, 2132, 2775, 3063
AcuI CTGAAG 6 cut(s) 22, 1347, 1443, 1998, 2783, 2976
AfaI GTAC 1 cut(s) 2331
AfiI CCNNNNNNNGG 4 cut(s) 1526, 1746, 2718, 3059
AflIII ACRYGT 1 cut(s) 2211
AjnI CCWGG 2 cut(s) 733, 1477
AjuI GAANNNNNNNTTGG 6 cut(s) 1937, 1969, 2006, 2038, 2388, 2420
Alw21I GWGCWC 1 cut(s) 1855
Alw26I GTCTC 3 cut(s) 983, 1142, 2688
AlwI GGATC 2 cut(s) 352, 1268
AlwNI CAGNNNCTG 4 cut(s) 121, 341, 1654, 1874
Ama87I CYCGRG 1 cut(s) 1848
AoxI GGCC 8 cut(s) 78, 1359, 1552, 1748, 2010, 2793, 2892, 3050
ApeKI GCWGC 5 cut(s) 645, 648, 1298, 2178, 2181
ApoI RAATTY 6 cut(s) 138, 599, 1825, 2132, 2775, 3063
AspS9I GGNCC 8 cut(s) 146, 216, 273, 1385, 1679, 1749, 2794, 2918
AsuHPI GGTGA 4 cut(s) 461, 1259, 1994, 3018
AsuNHI GCTAGC 1 cut(s) 2539
AvaI CYCGRG 1 cut(s) 1848
AvaII GGWCC 6 cut(s) 146, 216, 273, 1385, 1679, 2918
BalI TGGCCA 2 cut(s) 2012, 2894
BanI GGYRCC 1 cut(s) 914
BanII GRGCYC 1 cut(s) 1855
BauI CACGAG 1 cut(s) 2730
BbsI GAAGAC 1 cut(s) 305
Bbv12I GWGCWC 1 cut(s) 1855
BbvI GCAGC 5 cut(s) 657, 660, 1285, 2190, 2193
BcgI CGANNNNNNTGC 2 cut(s) 1829, 1863
BciT130I CCWGG 2 cut(s) 735, 1479
BciVI GTATCC 1 cut(s) 2930
BclI TGATCA 4 cut(s) 72, 1137, 1605, 2670
BcoDI GTCTC 3 cut(s) 983, 1142, 2688
BfmI CTRYAG 1 cut(s) 2061
BfuAI ACCTGC 1 cut(s) 204
BfuI GTATCC 1 cut(s) 2930
BglII AGATCT 1 cut(s) 1611
BisI GCNGC 5 cut(s) 646, 649, 1299, 2179, 2182
BlsI GCNGC 5 cut(s) 647, 650, 1300, 2180, 2183
Bme1390I CCNGG 2 cut(s) 735, 1479
Bme18I GGWCC 6 cut(s) 146, 216, 273, 1385, 1679, 2918
BmeT110I CYCGRG 1 cut(s) 1848
BmgT120I GGNCC 8 cut(s) 146, 216, 273, 1385, 1679, 1749, 2794, 2918
BmiI GGNNCC 3 cut(s) 916, 1386, 2919
BmrFI CCNGG 2 cut(s) 735, 1479
BmrI ACTGGG 1 cut(s) 1220
BmsI GCATC 3 cut(s) 1285, 2070, 2211
BmtI GCTAGC 1 cut(s) 2543
BmuI ACTGGG 1 cut(s) 1220
BpiI GAAGAC 1 cut(s) 305
BplI GAGNNNNNCTC 4 cut(s) 345, 377, 2840, 2872
BpmI CTGGAG 1 cut(s) 1705
BpuEI CTTGAG 3 cut(s) 67, 806, 2339
BsaAI YACGTR 1 cut(s) 2333
BsaBI GATNNNNATC 1 cut(s) 1610
BsaI GGTCTC 1 cut(s) 983
BsaJI CCNNGG 4 cut(s) 177, 1477, 1699, 2026
BsaXI ACNNNNNCTCC 2 cut(s) 1542, 1572
Bsc4I CCNNNNNNNGG 4 cut(s) 1526, 1746, 2718, 3059
Bse1I ACTGG 2 cut(s) 759, 1215
Bse3DI GCAATG 2 cut(s) 2382, 2982
Bse8I GATNNNNATC 1 cut(s) 1610
BseBI CCWGG 2 cut(s) 735, 1479
BseDI CCNNGG 4 cut(s) 177, 1477, 1699, 2026
BseGI GGATG 1 cut(s) 2482
BseJI GATNNNNATC 1 cut(s) 1610
BseLI CCNNNNNNNGG 4 cut(s) 1526, 1746, 2718, 3059
BseMI GCAATG 2 cut(s) 2382, 2982
BseMII CTCAG 5 cut(s) 1292, 1514, 1866, 2202, 2871
BseNI ACTGG 2 cut(s) 759, 1215
BseXI GCAGC 5 cut(s) 657, 660, 1285, 2190, 2193
BsgI GTGCAG 4 cut(s) 152, 370, 982, 1284
Bsh1236I CGCG 1 cut(s) 545
BshFI GGCC 8 cut(s) 80, 1361, 1554, 1750, 2012, 2795, 2894, 3052
BshNI GGYRCC 1 cut(s) 914
BsiHKAI GWGCWC 1 cut(s) 1855
BsiHKCI CYCGRG 1 cut(s) 1848
BslFI GGGAC 7 cut(s) 815, 1044, 1235, 1302, 1398, 2835, 2931
BslI CCNNNNNNNGG 4 cut(s) 1526, 1746, 2718, 3059
BsmAI GTCTC 3 cut(s) 983, 1142, 2688
BsmFI GGGAC 7 cut(s) 815, 1044, 1235, 1302, 1398, 2835, 2931
BsmI GAATGC 2 cut(s) 111, 2004
BsnI GGCC 8 cut(s) 80, 1361, 1554, 1750, 2012, 2795, 2894, 3052
Bso31I GGTCTC 1 cut(s) 983
BsoBI CYCGRG 1 cut(s) 1848
Bsp1286I GDGCHC 1 cut(s) 1855
Bsp19I CCATGG 2 cut(s) 1699, 2026
BspANI GGCC 8 cut(s) 80, 1361, 1554, 1750, 2012, 2795, 2894, 3052
BspCNI CTCAG 5 cut(s) 1291, 1513, 1867, 2201, 2870
BspFNI CGCG 1 cut(s) 545
BspHI TCATGA 3 cut(s) 568, 2101, 2443
BspLI GGNNCC 3 cut(s) 916, 1386, 2919
BspMI ACCTGC 1 cut(s) 204
BspOI GCTAGC 1 cut(s) 2543
BspPI GGATC 2 cut(s) 352, 1268
BspQI GCTCTTC 1 cut(s) 2192
BspT107I GGYRCC 1 cut(s) 914
BspTNI GGTCTC 1 cut(s) 983
BsrDI GCAATG 2 cut(s) 2382, 2982
BsrI ACTGG 2 cut(s) 759, 1215
BssECI CCNNGG 4 cut(s) 177, 1477, 1699, 2026
BssNAI GTATAC 1 cut(s) 1164
BssSI CACGAG 1 cut(s) 2730
BssT1I CCWWGG 3 cut(s) 177, 1699, 2026
Bst1107I GTATAC 1 cut(s) 1164
Bst2BI CACGAG 1 cut(s) 2730
Bst2UI CCWGG 2 cut(s) 735, 1479
Bst4CI ACNGT 6 cut(s) 1018, 1192, 2473, 2534, 2551, 3046
Bst6I CTCTTC 2 cut(s) 951, 2192
BstAPI GCANNNNNTGC 1 cut(s) 1433
BstBAI YACGTR 1 cut(s) 2333
BstC8I GCNNGC 4 cut(s) 1727, 1748, 2010, 2541
BstDSI CCRYGG 2 cut(s) 1699, 2026
BstF5I GGATG 1 cut(s) 2482
BstFNI CGCG 1 cut(s) 545
BstMAI GTCTC 3 cut(s) 983, 1142, 2688
BstMWI GCNNNNNNNGC 5 cut(s) 1433, 2018, 2063, 2255, 2966
BstNI CCWGG 2 cut(s) 735, 1479
BstNSI RCATGY 4 cut(s) 196, 1250, 1729, 2215
BstSCI CCNGG 2 cut(s) 733, 1477
BstSFI CTRYAG 1 cut(s) 2061
BstUI CGCG 1 cut(s) 545
BstV1I GCAGC 5 cut(s) 657, 660, 1285, 2190, 2193
BstV2I GAAGAC 1 cut(s) 305
BstX2I RGATCY 2 cut(s) 357, 1611
BstYI RGATCY 2 cut(s) 357, 1611
BstZ17I GTATAC 1 cut(s) 1164
BsuI GTATCC 1 cut(s) 2930
BsuRI GGCC 8 cut(s) 80, 1361, 1554, 1750, 2012, 2795, 2894, 3052
BtgI CCRYGG 2 cut(s) 1699, 2026
BtgZI GCGATG 3 cut(s) 221, 560, 2310
BtsCI GGATG 1 cut(s) 2482
BtsI GCAGTG 1 cut(s) 849
BtsIMutI CAGTG 5 cut(s) 766, 849, 1419, 2478, 2952
BveI ACCTGC 1 cut(s) 204
Cac8I GCNNGC 4 cut(s) 1727, 1748, 2010, 2541
CaiI CAGNNNCTG 4 cut(s) 121, 341, 1654, 1874
CciI TCATGA 3 cut(s) 568, 2101, 2443
Cfr13I GGNCC 8 cut(s) 146, 216, 273, 1385, 1679, 1749, 2794, 2918
CseI GACGC 1 cut(s) 551
Csp6I GTAC 1 cut(s) 2330
CviQI GTAC 1 cut(s) 2330
DraI TTTAAA 1 cut(s) 1309
EaeI YGGCCR 3 cut(s) 2010, 2892, 3050
Eam1104I CTCTTC 2 cut(s) 951, 2192
EarI CTCTTC 2 cut(s) 951, 2192
Ecl136II GAGCTC 1 cut(s) 1853
Eco130I CCWWGG 3 cut(s) 177, 1699, 2026
Eco147I AGGCCT 2 cut(s) 80, 1554
Eco24I GRGCYC 1 cut(s) 1855
Eco31I GGTCTC 1 cut(s) 983
Eco32I GATATC 1 cut(s) 627
Eco47I GGWCC 6 cut(s) 146, 216, 273, 1385, 1679, 2918
Eco53kI GAGCTC 1 cut(s) 1853
Eco57I CTGAAG 6 cut(s) 22, 1347, 1443, 1998, 2783, 2976
Eco88I CYCGRG 1 cut(s) 1848
EcoICRI GAGCTC 1 cut(s) 1853
EcoO109I RGGNCCY 3 cut(s) 1385, 1679, 2918
EcoRI GAATTC 2 cut(s) 138, 3063
EcoRII CCWGG 2 cut(s) 733, 1477
EcoRV GATATC 1 cut(s) 627
EcoT14I CCWWGG 3 cut(s) 177, 1699, 2026
EcoT38I GRGCYC 1 cut(s) 1855
ErhI CCWWGG 3 cut(s) 177, 1699, 2026
FalI AAGNNNNNCTT 4 cut(s) 2189, 2221, 2213, 2245
FaqI GGGAC 7 cut(s) 815, 1044, 1235, 1302, 1398, 2835, 2931
FbaI TGATCA 4 cut(s) 72, 1137, 1605, 2670
FblI GTMKAC 1 cut(s) 1163
Fnu4HI GCNGC 5 cut(s) 646, 649, 1299, 2179, 2182
FokI GGATG 1 cut(s) 2489
FriOI GRGCYC 1 cut(s) 1855
Fsp4HI GCNGC 5 cut(s) 646, 649, 1299, 2179, 2182
GluI GCNGC 5 cut(s) 646, 649, 1299, 2179, 2182
GsuI CTGGAG 1 cut(s) 1705
HaeIII GGCC 8 cut(s) 80, 1361, 1554, 1750, 2012, 2795, 2894, 3052
HgaI GACGC 1 cut(s) 551
HincII GTYRAC 1 cut(s) 2145
HindII GTYRAC 1 cut(s) 2145
HindIII AAGCTT 3 cut(s) 782, 868, 2315
HphI GGTGA 4 cut(s) 461, 1259, 1994, 3018
Hpy166II GTNNAC 7 cut(s) 99, 612, 1164, 1489, 1520, 2145, 3022
Hpy8I GTNNAC 7 cut(s) 99, 612, 1164, 1489, 1520, 2145, 3022
Hpy99I CGWCG 1 cut(s) 545
HpyCH4III ACNGT 6 cut(s) 1018, 1192, 2473, 2534, 2551, 3046
HpyCH4IV ACGT 1 cut(s) 2332
HpyF10VI GCNNNNNNNGC 5 cut(s) 1433, 2018, 2063, 2255, 2966
HpySE526I ACGT 1 cut(s) 2332
Ksp22I TGATCA 4 cut(s) 72, 1137, 1605, 2670
LguI GCTCTTC 1 cut(s) 2192
LmnI GCTCC 1 cut(s) 1806
Lsp1109I GCAGC 5 cut(s) 657, 660, 1285, 2190, 2193
LweI GCATC 3 cut(s) 1285, 2070, 2211
MaeII ACGT 1 cut(s) 2332
MaeIII GTNAC 8 cut(s) 331, 401, 844, 1417, 1761, 1969, 2276, 2333
MfeI CAATTG 1 cut(s) 1856
MflI RGATCY 2 cut(s) 357, 1611
MhlI GDGCHC 1 cut(s) 1855
MlsI TGGCCA 2 cut(s) 2012, 2894
MluNI TGGCCA 2 cut(s) 2012, 2894
MlyI GAGTC 9 cut(s) 94, 100, 797, 1144, 1633, 2053, 2330, 2690, 2736
MmeI TCCRAC 4 cut(s) 128, 213, 504, 1661
Mox20I TGGCCA 2 cut(s) 2012, 2894
MscI TGGCCA 2 cut(s) 2012, 2894
MseI TTAA 8 cut(s) 26, 506, 822, 1308, 1571, 2039, 2234, 2654
MslI CAYNNNNRTG 3 cut(s) 912, 2216, 2445
Msp20I TGGCCA 2 cut(s) 2012, 2894
MspA1I CMGCKG 1 cut(s) 2765
MspR9I CCNGG 2 cut(s) 735, 1479
MunI CAATTG 1 cut(s) 1856
Mva1269I GAATGC 2 cut(s) 111, 2004
MvaI CCWGG 2 cut(s) 735, 1479
MvnI CGCG 1 cut(s) 545
MwoI GCNNNNNNNGC 5 cut(s) 1433, 2018, 2063, 2255, 2966
NcoI CCATGG 2 cut(s) 1699, 2026
NheI GCTAGC 1 cut(s) 2539
NlaIV GGNNCC 3 cut(s) 916, 1386, 2919
NmeAIII GCCGAG 1 cut(s) 423
NmuCI GTSAC 4 cut(s) 844, 1417, 1761, 2333
NspI RCATGY 4 cut(s) 196, 1250, 1729, 2215
PaeI GCATGC 1 cut(s) 1729
PaeR7I CTCGAG 1 cut(s) 1848
PagI TCATGA 3 cut(s) 568, 2101, 2443
PceI AGGCCT 2 cut(s) 80, 1554
PciI ACATGT 1 cut(s) 2211
PciSI GCTCTTC 1 cut(s) 2192
PctI GAATGC 2 cut(s) 111, 2004
PfeI GAWTC 8 cut(s) 773, 1320, 1447, 1633, 1671, 2050, 2853, 2980
PflMI CCANNNNNTGG 2 cut(s) 1526, 3059
PfoI TCCNGGA 1 cut(s) 733
PkrI GCNGC 5 cut(s) 647, 650, 1300, 2180, 2183
PleI GAGTC 9 cut(s) 94, 100, 797, 1144, 1633, 2052, 2330, 2689, 2736
PpsI GAGTC 9 cut(s) 94, 100, 797, 1144, 1633, 2052, 2330, 2689, 2736
Ppu21I YACGTR 1 cut(s) 2333
PpuMI RGGWCCY 3 cut(s) 1385, 1679, 2918
PscI ACATGT 1 cut(s) 2211
Psp124BI GAGCTC 1 cut(s) 1855
Psp5II RGGWCCY 3 cut(s) 1385, 1679, 2918
Psp6I CCWGG 2 cut(s) 733, 1477
PspGI CCWGG 2 cut(s) 733, 1477
PspN4I GGNNCC 3 cut(s) 916, 1386, 2919
PspPI GGNCC 8 cut(s) 146, 216, 273, 1385, 1679, 1749, 2794, 2918
PspPPI RGGWCCY 3 cut(s) 1385, 1679, 2918
PstNI CAGNNNCTG 4 cut(s) 121, 341, 1654, 1874
PsuI RGATCY 2 cut(s) 357, 1611
PvuII CAGCTG 1 cut(s) 2765
RsaI GTAC 1 cut(s) 2331
RsaNI GTAC 1 cut(s) 2330
RseI CAYNNNNRTG 3 cut(s) 912, 2216, 2445
SacI GAGCTC 1 cut(s) 1855
SapI GCTCTTC 1 cut(s) 2192
SaqAI TTAA 8 cut(s) 26, 506, 822, 1308, 1571, 2039, 2234, 2654
SatI GCNGC 5 cut(s) 646, 649, 1299, 2179, 2182
Sau96I GGNCC 8 cut(s) 146, 216, 273, 1385, 1679, 1749, 2794, 2918
SchI GAGTC 9 cut(s) 94, 100, 797, 1144, 1633, 2053, 2330, 2690, 2736
ScrFI CCNGG 2 cut(s) 735, 1479
SduI GDGCHC 1 cut(s) 1855
SfaNI GCATC 3 cut(s) 1285, 2070, 2211
SfcI CTRYAG 1 cut(s) 2061
Sfr274I CTCGAG 1 cut(s) 1848
SinI GGWCC 6 cut(s) 146, 216, 273, 1385, 1679, 2918
SlaI CTCGAG 1 cut(s) 1848
SmiMI CAYNNNNRTG 3 cut(s) 912, 2216, 2445
SmlI CTYRAG 4 cut(s) 46, 785, 1848, 2318
SmoI CTYRAG 4 cut(s) 46, 785, 1848, 2318
SphI GCATGC 1 cut(s) 1729
SseBI AGGCCT 2 cut(s) 80, 1554
SspI AATATT 1 cut(s) 1938
SstI GAGCTC 1 cut(s) 1855
StuI AGGCCT 2 cut(s) 80, 1554
StyD4I CCNGG 2 cut(s) 733, 1477
StyI CCWWGG 3 cut(s) 177, 1699, 2026
TaaI ACNGT 6 cut(s) 1018, 1192, 2473, 2534, 2551, 3046
TaiI ACGT 1 cut(s) 2335
TaqI TCGA 3 cut(s) 316, 1849, 2451
TfiI GAWTC 8 cut(s) 773, 1320, 1447, 1633, 1671, 2050, 2853, 2980
Tru1I TTAA 8 cut(s) 26, 506, 822, 1308, 1571, 2039, 2234, 2654
Tru9I TTAA 8 cut(s) 26, 506, 822, 1308, 1571, 2039, 2234, 2654
TscAI CASTG 5 cut(s) 766, 849, 1426, 2478, 2959
TseFI GTSAC 4 cut(s) 844, 1417, 1761, 2333
TseI GCWGC 5 cut(s) 645, 648, 1298, 2178, 2181
Tsp45I GTSAC 4 cut(s) 844, 1417, 1761, 2333
TspRI CASTG 5 cut(s) 766, 849, 1426, 2478, 2959
Van91I CCANNNNNTGG 2 cut(s) 1526, 3059
VpaK11BI GGWCC 6 cut(s) 146, 216, 273, 1385, 1679, 2918
XapI RAATTY 6 cut(s) 138, 599, 1825, 2132, 2775, 3063
XceI RCATGY 4 cut(s) 196, 1250, 1729, 2215
XcmI CCANNNNNNNNNTGG 4 cut(s) 491, 814, 2887, 2968
XhoI CTCGAG 1 cut(s) 1848
XmiI GTMKAC 1 cut(s) 1163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.