MD13G1057200.v1.1

Cytochrome P450

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Reverse (-)
4011867 .. 4012836
970 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1057200.v1.1.491

Sequence Viewer

Length: 768 bp
ATGAGTTGTTTGGGTCCAGTAGTCATTTTTTCTAGCATTCTGTGTCTGTCCATTCTCTTAGCTCTCATCAAGGAATTTCACAAACTATGGTGGACTCCAACTCGGATACAGAAACGTATGGCTTTTCAGGGAATCAAAGGTCCTTCTTACAGATTTTTCCATGGAAACACCAAAGAAATCATGAGTATGAAAATGGAAACTATGGACAGGCCCGGAGACTTATCTGTGAACGTATTTTCTGCAGTTCAACCTCATATTCACACATGGACCAAGATATATGGGAAGATTTATCTTCAATGGCATGGTTCTCAAGCTCAGTTGGTCGTTATGGAACCCCAGTTGTGCAAAGAGATACTAAATAACAAAGATGGAGCTTATCCAAAAAGGAAGCTCCAAGGCTTTGTCAAGAAGCTAGTAGGAGATAGCATGGGGACAAGTACAACTGAGGGGGGGAAATGGGGGAAACTTAAAAAGCTGGCCAACCATGCCTTTCATGGAGAAAGCTTAAAAAGTATGATCCCAGCAATGACAGCTAGTGCCGAGATGATGTTAGAAGAGTGGAAAAATCATGAAGGAAAAGAGATTGAAGTTTATGAACAATTTAGGTTGTTCACTTCAGAAGTGATTTCCAGGACGGCATTTGGCAGCAGTTACATAGAAGGAAAGAACTTTTTTGACAATTTGATGAAGTTATCATCTTTATTAGTCAAAAATTCTTTAACAGTCAGGTTTCCAGGCATCAGGTTTTCATCTTATCTATGTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

256

Amino Acids

29.1

Weight (kDa)

9.53

Isoelectric Point (pI)

38.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 87 - 236 3.3e-17 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 511
AcoI YGGCCR 1 cut(s) 477
AcsI RAATTY 2 cut(s) 74, 712
AcuI CTGAAG 1 cut(s) 600
AfaI GTAC 1 cut(s) 439
AgsI TTSAA 3 cut(s) 248, 296, 587
AjnI CCWGG 2 cut(s) 629, 733
AluBI AGCT 8 cut(s) 62, 314, 374, 391, 412, 475, 504, 533
AluI AGCT 8 cut(s) 62, 314, 374, 391, 412, 475, 504, 533
Alw26I GTCTC 1 cut(s) 210
AlwI GGATC 1 cut(s) 511
AoxI GGCC 2 cut(s) 209, 477
ApeKI GCWGC 1 cut(s) 645
ApoI RAATTY 2 cut(s) 74, 712
AspS9I GGNCC 4 cut(s) 14, 140, 210, 267
AsuC2I CCSGG 1 cut(s) 213
AvaII GGWCC 3 cut(s) 14, 140, 267
BalI TGGCCA 1 cut(s) 479
BbvI GCAGC 1 cut(s) 657
BccI CCATC 1 cut(s) 362
BceAI ACGGC 1 cut(s) 651
BciT130I CCWGG 2 cut(s) 631, 735
BciVI GTATCC 1 cut(s) 99
BcnI CCSGG 1 cut(s) 213
BcoDI GTCTC 1 cut(s) 210
BfaI CTAG 3 cut(s) 33, 413, 534
BfmI CTRYAG 1 cut(s) 240
BfuI GTATCC 1 cut(s) 99
BisI GCNGC 1 cut(s) 646
BlsI GCNGC 1 cut(s) 647
Bme1390I CCNGG 3 cut(s) 213, 631, 735
Bme18I GGWCC 3 cut(s) 14, 140, 267
BmgT120I GGNCC 4 cut(s) 14, 140, 210, 267
BmiI GGNNCC 2 cut(s) 15, 333
BmrFI CCNGG 3 cut(s) 213, 631, 735
BmrI ACTGGG 1 cut(s) 331
BmsI GCATC 1 cut(s) 747
BmuI ACTGGG 1 cut(s) 331
BpuEI CTTGAG 1 cut(s) 294
BpuMI CCSGG 1 cut(s) 213
BsaJI CCNNGG 2 cut(s) 160, 394
Bse1I ACTGG 2 cut(s) 17, 337
Bse3DI GCAATG 1 cut(s) 531
BseBI CCWGG 2 cut(s) 631, 735
BseDI CCNNGG 2 cut(s) 160, 394
BseMI GCAATG 1 cut(s) 531
BseMII CTCAG 2 cut(s) 329, 435
BseNI ACTGG 2 cut(s) 17, 337
BseXI GCAGC 1 cut(s) 657
BseYI CCCAGC 1 cut(s) 520
BshFI GGCC 2 cut(s) 211, 479
BsiSI CCGG 1 cut(s) 213
BslFI GGGAC 1 cut(s) 445
BsmAI GTCTC 1 cut(s) 210
BsmFI GGGAC 1 cut(s) 445
BsmI GAATGC 1 cut(s) 36
BsnI GGCC 2 cut(s) 211, 479
Bsp143I GATC 1 cut(s) 516
Bsp19I CCATGG 1 cut(s) 160
BspANI GGCC 2 cut(s) 211, 479
BspCNI CTCAG 2 cut(s) 328, 436
BspHI TCATGA 2 cut(s) 180, 568
BspLI GGNNCC 2 cut(s) 15, 333
BspMAI CTGCAG 1 cut(s) 244
BspPI GGATC 1 cut(s) 511
BsrDI GCAATG 1 cut(s) 531
BsrI ACTGG 2 cut(s) 17, 337
BssECI CCNNGG 2 cut(s) 160, 394
BssMI GATC 1 cut(s) 516
BssT1I CCWWGG 2 cut(s) 160, 394
Bst2UI CCWGG 2 cut(s) 631, 735
Bst4CI ACNGT 1 cut(s) 724
Bst6I CTCTTC 1 cut(s) 549
BstC8I GCNNGC 1 cut(s) 477
BstDEI CTNAG 3 cut(s) 58, 315, 444
BstDSI CCRYGG 1 cut(s) 160
BstKTI GATC 1 cut(s) 519
BstMAI GTCTC 1 cut(s) 210
BstMBI GATC 1 cut(s) 516
BstMWI GCNNNNNNNGC 2 cut(s) 485, 530
BstNI CCWGG 2 cut(s) 631, 735
BstSCI CCNGG 3 cut(s) 211, 629, 733
BstSFI CTRYAG 1 cut(s) 240
BstV1I GCAGC 1 cut(s) 657
BsuI GTATCC 1 cut(s) 99
BsuRI GGCC 2 cut(s) 211, 479
BtgI CCRYGG 1 cut(s) 160
Cac8I GCNNGC 1 cut(s) 477
CciI TCATGA 2 cut(s) 180, 568
Cfr13I GGNCC 4 cut(s) 14, 140, 210, 267
Csp6I GTAC 1 cut(s) 438
CviAII CATG 8 cut(s) 161, 181, 264, 302, 427, 485, 494, 569
CviQI GTAC 1 cut(s) 438
DdeI CTNAG 3 cut(s) 58, 315, 444
DpnI GATC 1 cut(s) 518
DpnII GATC 1 cut(s) 516
EaeI YGGCCR 1 cut(s) 477
Eam1104I CTCTTC 1 cut(s) 549
EarI CTCTTC 1 cut(s) 549
Eco130I CCWWGG 2 cut(s) 160, 394
Eco47I GGWCC 3 cut(s) 14, 140, 267
Eco57I CTGAAG 1 cut(s) 600
EcoO109I RGGNCCY 1 cut(s) 140
EcoRII CCWGG 2 cut(s) 629, 733
EcoT14I CCWWGG 2 cut(s) 160, 394
ErhI CCWWGG 2 cut(s) 160, 394
FaeI CATG 8 cut(s) 164, 184, 267, 305, 430, 488, 497, 572
FaqI GGGAC 1 cut(s) 445
FatI CATG 8 cut(s) 160, 180, 263, 301, 426, 484, 493, 568
Fnu4HI GCNGC 1 cut(s) 646
Fsp4HI GCNGC 1 cut(s) 646
FspBI CTAG 3 cut(s) 33, 413, 534
GluI GCNGC 1 cut(s) 646
GsaI CCCAGC 1 cut(s) 524
HaeIII GGCC 2 cut(s) 211, 479
HapII CCGG 1 cut(s) 213
Hin1II CATG 8 cut(s) 164, 184, 267, 305, 430, 488, 497, 572
HindIII AAGCTT 1 cut(s) 502
HinfI GANTC 2 cut(s) 94, 132
HpaII CCGG 1 cut(s) 213
Hpy166II GTNNAC 3 cut(s) 93, 229, 612
Hpy188I TCNGA 2 cut(s) 105, 619
Hpy188III TCNNGA 3 cut(s) 181, 406, 569
Hpy8I GTNNAC 3 cut(s) 93, 229, 612
HpyAV CCTTC 3 cut(s) 153, 566, 653
HpyCH4III ACNGT 1 cut(s) 724
HpyCH4IV ACGT 2 cut(s) 115, 231
HpyCH4V TGCA 2 cut(s) 242, 345
HpyF10VI GCNNNNNNNGC 2 cut(s) 485, 530
HpyF3I CTNAG 3 cut(s) 58, 315, 444
HpySE526I ACGT 2 cut(s) 115, 231
Hsp92II CATG 8 cut(s) 164, 184, 267, 305, 430, 488, 497, 572
Kzo9I GATC 1 cut(s) 516
LmnI GCTCC 2 cut(s) 371, 396
Lsp1109I GCAGC 1 cut(s) 657
LweI GCATC 1 cut(s) 747
MaeI CTAG 3 cut(s) 33, 413, 534
MaeII ACGT 2 cut(s) 115, 231
MaeIII GTNAC 1 cut(s) 650
MalI GATC 1 cut(s) 518
MboI GATC 1 cut(s) 516
MboII GAAGA 3 cut(s) 284, 295, 566
MlsI TGGCCA 1 cut(s) 479
MluCI AATT 4 cut(s) 74, 599, 679, 712
MluNI TGGCCA 1 cut(s) 479
MlyI GAGTC 1 cut(s) 88
MmeI TCCRAC 1 cut(s) 122
MnlI CCTC 2 cut(s) 261, 439
Mox20I TGGCCA 1 cut(s) 479
MscI TGGCCA 1 cut(s) 479
MseI TTAA 3 cut(s) 468, 506, 719
MslI CAYNNNNRTG 1 cut(s) 185
Msp20I TGGCCA 1 cut(s) 479
MspI CCGG 1 cut(s) 213
MspR9I CCNGG 3 cut(s) 213, 631, 735
Mva1269I GAATGC 1 cut(s) 36
MvaI CCWGG 2 cut(s) 631, 735
MwoI GCNNNNNNNGC 2 cut(s) 485, 530
NciI CCSGG 1 cut(s) 213
NcoI CCATGG 1 cut(s) 160
NdeII GATC 1 cut(s) 516
NlaIII CATG 8 cut(s) 164, 184, 267, 305, 430, 488, 497, 572
NlaIV GGNNCC 2 cut(s) 15, 333
NmeAIII GCCGAG 1 cut(s) 565
PagI TCATGA 2 cut(s) 180, 568
PctI GAATGC 1 cut(s) 36
PfeI GAWTC 1 cut(s) 132
PfoI TCCNGGA 1 cut(s) 629
PkrI GCNGC 1 cut(s) 647
PleI GAGTC 1 cut(s) 88
PpsI GAGTC 1 cut(s) 88
PpuMI RGGWCCY 1 cut(s) 140
Psp5II RGGWCCY 1 cut(s) 140
Psp6I CCWGG 2 cut(s) 629, 733
PspFI CCCAGC 1 cut(s) 520
PspGI CCWGG 2 cut(s) 629, 733
PspN4I GGNNCC 2 cut(s) 15, 333
PspPI GGNCC 4 cut(s) 14, 140, 210, 267
PspPPI RGGWCCY 1 cut(s) 140
PstI CTGCAG 1 cut(s) 244
RsaI GTAC 1 cut(s) 439
RsaNI GTAC 1 cut(s) 438
RseI CAYNNNNRTG 1 cut(s) 185
SaqAI TTAA 3 cut(s) 468, 506, 719
SatI GCNGC 1 cut(s) 646
Sau3AI GATC 1 cut(s) 516
Sau96I GGNCC 4 cut(s) 14, 140, 210, 267
SchI GAGTC 1 cut(s) 88
ScrFI CCNGG 3 cut(s) 213, 631, 735
SfaNI GCATC 1 cut(s) 747
SfcI CTRYAG 1 cut(s) 240
SinI GGWCC 3 cut(s) 14, 140, 267
SmiMI CAYNNNNRTG 1 cut(s) 185
SmlI CTYRAG 1 cut(s) 309
SmoI CTYRAG 1 cut(s) 309
Sse9I AATT 4 cut(s) 74, 599, 679, 712
SspMI CTAG 3 cut(s) 33, 413, 534
StyD4I CCNGG 3 cut(s) 211, 629, 733
StyI CCWWGG 2 cut(s) 160, 394
TaaI ACNGT 1 cut(s) 724
TaiI ACGT 2 cut(s) 118, 234
TasI AATT 4 cut(s) 74, 599, 679, 712
TatI WGTACW 1 cut(s) 437
TfiI GAWTC 1 cut(s) 132
Tru1I TTAA 3 cut(s) 468, 506, 719
Tru9I TTAA 3 cut(s) 468, 506, 719
TseI GCWGC 1 cut(s) 645
TspDTI ATGAA 6 cut(s) 203, 482, 585, 609, 701, 738
VpaK11BI GGWCC 3 cut(s) 14, 140, 267
XapI RAATTY 2 cut(s) 74, 712
XcmI CCANNNNNNNNNTGG 1 cut(s) 491
XspI CTAG 3 cut(s) 33, 413, 534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.