Rroxscaffold_1G00053460

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000078
Physical Location & Seq
Reverse (-)
74337300 .. 74420886
83587 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00053460.1

Sequence Viewer

Length: 1560 bp
ATGAGTACTATTGGATTCCCAGTATTCATTGTTTCAAGCTTTGTGTTTCTGTTCCTTCTGATCTTCAAGATATTCAAGATCTTTCACACACAATGGTGGACTCCAACTCGCCTACAGAAACTGATGGGTCTGCAGGGAATCAAAGGCCCTTCTTACAAACTTGTCGATGGAAACGCCAAAGAAATCTTGAACATGAAGAAGGAAGCCATGAGCAGAACCAAAAGTTTATCACACGACATATTTCCTGTAATTCAACCTCAGTATCACTCGTGGCTCAAGACATATGCAGGGAAGATTTTTCTTCAGTGGTTAGGTACCGAAGCTCAGTTGGTAGTTATGGAACCGGAGTTATGCAAAGAGATACTGAATAACAAAGGCAAAGTTTATCTGCAAATGAAACAACAAGGGTTTGGGAAGAAGCTGTTAGGAAACAGCCTCGCGACTTCTGAAGGAGAACAATGGCTAAAACTGCGAAAGCTGGCTAACCATGCTTTCCATAGAGAAAGTTTAAAAAGTATGGTTCCGTATATGATAGCTAGTGCTGAGAAGATGGTGCAAAGGTGGCAAAATAGCGAGGGCAAAGAGATCGAGATGTATCAAGAATTTAAGTTGTTTACTTCAGAAGTGATTTCTAGGACAGCATTTGGCAGCAGCTATTTAGAAGGGAAGAAAATTTTTGACATGTTGACGGATTTATCCTCGTTATTGGTCAAAAATTCTTTTAAGATCAGGCTTCCTGGTATCCGAAAGCTTTTCAAAACTAGTGATGAAATTGAAGCAGAGAAGCTTGAGAAGGAAATACGCGAAACGATACTGGAGATTGTAAAGAAAAGAGAAAACAAGGCAGTGACTCAGCAGGATGAACACAACTTTGGGGGTGATTTTCTTGGATTACTTTTAAAGGCTCATCATGATGACAGTAATGACGGATATAGGATCACGATAGATGATATAATTGATCAGTGCAAGGCATTGTACTTTGCTGGACAAGAAATCACTAATGGTTTGCTGGTTTGGACCGTCTTTCTTCTGGCACTCCATCAGGATTGGCAAGAGGAAGCAAGAAAAGAAGTCCTGCAATTATTCGGAAAACAGAATCCAAATTCCGATGGCATTTCCAGACTAAAAACTATGAATATGATCATCAATGAGTCTCTAAGGTTATATCCTCCTGTTATTCAACTTGTAAAGAAATCTGAAAGGGAAAGTAGGCTTGGGAAGTTGATTGTTCCTGCTAATATTGATTTAGTCATCCCAACTTTAGCACTTCACCATGACCCTCAAATATGGGGACAAGACGCGGAACTTTTCAAACCAGAGCGATTCTCGGACGGGGTTGCTAAAGCTACTAAGGATAACATGGCTGCATTCATACCCTTTGGAATGGGACCTAGAATTTGTGTGGGTTTCAACTTTGCCACCACTGAAACTAAGATTGCTCTGTCAATGATTCTGCAACGCTATGCCTTCACTCTTTCCCCGGGTTACGTCCACGCTCCTTTTCATTTTCTTACTGTTCGCCCACAGCATGGAGTTCAAGTAATGCTGCACTCCCTGTGA

Protein Analysis

519

Amino Acids

59.51

Weight (kDa)

9.21

Isoelectric Point (pI)

36.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 87 - 495 4.6e-78 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 314
AccB1I GGYRCC 1 cut(s) 314
AccB7I CCANNNNNTGG 1 cut(s) 1529
AccII CGCG 3 cut(s) 440, 804, 1301
AciI CCGC 1 cut(s) 1301
AclWI GGATC 1 cut(s) 944
AcsI RAATTY 5 cut(s) 602, 672, 715, 1102, 1395
AcuI CTGAAG 3 cut(s) 287, 468, 603
AfaI GTAC 3 cut(s) 7, 316, 977
AfiI CCNNNNNNNGG 1 cut(s) 1529
AflIII ACRYGT 1 cut(s) 681
AhlI ACTAGT 1 cut(s) 761
AjnI CCWGG 1 cut(s) 736
AjuI GAANNNNNNNTTGG 4 cut(s) 855, 887, 1197, 1229
AleI CACNNNNGTG 1 cut(s) 94
AluBI AGCT 9 cut(s) 39, 323, 421, 478, 536, 654, 751, 787, 1346
AluI AGCT 9 cut(s) 39, 323, 421, 478, 536, 654, 751, 787, 1346
Alw26I GTCTC 1 cut(s) 1158
AlwI GGATC 1 cut(s) 944
AlwNI CAGNNNCTG 1 cut(s) 121
Ama87I CYCGRG 1 cut(s) 1480
AoxI GGCC 1 cut(s) 145
ApeKI GCWGC 4 cut(s) 648, 651, 1364, 1546
ApoI RAATTY 5 cut(s) 602, 672, 715, 1102, 1395
ArsI GACNNNNNNTTYG 2 cut(s) 1380, 1412
Asp718I GGTACC 1 cut(s) 314
AspS9I GGNCC 3 cut(s) 146, 1017, 1388
AsuC2I CCSGG 2 cut(s) 1481, 1482
AsuHPI GGTGA 2 cut(s) 890, 1262
AvaI CYCGRG 1 cut(s) 1480
AvaII GGWCC 2 cut(s) 1017, 1388
BaeI ACNNNNGTAYC 2 cut(s) 245, 278
BanI GGYRCC 1 cut(s) 314
BauI CACGAG 1 cut(s) 268
BbvI GCAGC 4 cut(s) 660, 663, 1351, 1533
BccI CCATC 5 cut(s) 118, 161, 544, 1047, 1103
BcgI CGANNNNNNTGC 2 cut(s) 568, 602
BciT130I CCWGG 1 cut(s) 738
BciVI GTATCC 1 cut(s) 752
BclI TGATCA 2 cut(s) 958, 1140
BcnI CCSGG 2 cut(s) 1481, 1482
BcoDI GTCTC 1 cut(s) 1158
BcuI ACTAGT 1 cut(s) 761
BfaI CTAG 4 cut(s) 537, 633, 762, 1392
BfmI CTRYAG 2 cut(s) 113, 131
BfuI GTATCC 1 cut(s) 752
BglII AGATCT 1 cut(s) 78
BisI GCNGC 4 cut(s) 649, 652, 1365, 1547
BlsI GCNGC 4 cut(s) 650, 653, 1366, 1548
BmcAI AGTACT 1 cut(s) 7
Bme1390I CCNGG 3 cut(s) 738, 1481, 1482
Bme18I GGWCC 2 cut(s) 1017, 1388
BmeT110I CYCGRG 1 cut(s) 1480
BmgT120I GGNCC 3 cut(s) 146, 1017, 1388
BmiI GGNNCC 4 cut(s) 316, 342, 522, 1389
BmrFI CCNGG 3 cut(s) 738, 1481, 1482
BmrI ACTGGG 1 cut(s) 14
BmuI ACTGGG 1 cut(s) 14
BplI GAGNNNNNCTC 2 cut(s) 1310, 1342
BpmI CTGGAG 1 cut(s) 836
BpuEI CTTGAG 2 cut(s) 260, 809
BpuMI CCSGG 2 cut(s) 1481, 1482
BsaJI CCNNGG 2 cut(s) 1479, 1480
BsaWI WCCGGW 1 cut(s) 343
BsaXI ACNNNNNCTCC 2 cut(s) 1524, 1554
Bsc4I CCNNNNNNNGG 1 cut(s) 1529
Bse1I ACTGG 2 cut(s) 20, 819
BseBI CCWGG 1 cut(s) 738
BseDI CCNNGG 2 cut(s) 1479, 1480
BseGI GGATG 2 cut(s) 865, 1251
BseLI CCNNNNNNNGG 1 cut(s) 1529
BseMII CTCAG 4 cut(s) 272, 338, 534, 866
BseNI ACTGG 2 cut(s) 20, 819
BseXI GCAGC 4 cut(s) 660, 663, 1351, 1533
BsgI GTGCAG 1 cut(s) 1532
Bsh1236I CGCG 3 cut(s) 440, 804, 1301
BshFI GGCC 1 cut(s) 147
BshNI GGYRCC 1 cut(s) 314
BsiHKCI CYCGRG 1 cut(s) 1480
BsiSI CCGG 2 cut(s) 344, 1481
BslFI GGGAC 2 cut(s) 1305, 1401
BslI CCNNNNNNNGG 1 cut(s) 1529
BsmAI GTCTC 1 cut(s) 1158
BsmFI GGGAC 2 cut(s) 1305, 1401
BsmI GAATGC 1 cut(s) 1367
BsnI GGCC 1 cut(s) 147
BsoBI CYCGRG 1 cut(s) 1480
Bsp143I GATC 7 cut(s) 60, 78, 585, 726, 936, 958, 1140
Bsp68I TCGCGA 1 cut(s) 440
BspACI CCGC 1 cut(s) 1301
BspANI GGCC 1 cut(s) 147
BspCNI CTCAG 4 cut(s) 271, 337, 535, 865
BspFNI CGCG 3 cut(s) 440, 804, 1301
BspHI TCATGA 1 cut(s) 910
BspLI GGNNCC 4 cut(s) 316, 342, 522, 1389
BspMAI CTGCAG 1 cut(s) 135
BspPI GGATC 1 cut(s) 944
BspT107I GGYRCC 1 cut(s) 314
BsrI ACTGG 2 cut(s) 20, 819
BssECI CCNNGG 2 cut(s) 1479, 1480
BssMI GATC 7 cut(s) 60, 78, 585, 726, 936, 958, 1140
BssSI CACGAG 1 cut(s) 268
Bst2BI CACGAG 1 cut(s) 268
Bst2UI CCWGG 1 cut(s) 738
Bst4CI ACNGT 3 cut(s) 920, 1021, 1516
BstC8I GCNNGC 1 cut(s) 480
BstDEI CTNAG 7 cut(s) 258, 324, 543, 852, 1157, 1350, 1431
BstF5I GGATG 2 cut(s) 865, 1251
BstFNI CGCG 3 cut(s) 440, 804, 1301
BstKTI GATC 7 cut(s) 63, 81, 588, 729, 939, 961, 1143
BstMAI GTCTC 1 cut(s) 1158
BstMBI GATC 7 cut(s) 60, 78, 585, 726, 936, 958, 1140
BstMWI GCNNNNNNNGC 3 cut(s) 469, 488, 562
BstNI CCWGG 1 cut(s) 738
BstNSI RCATGY 1 cut(s) 685
BstSCI CCNGG 3 cut(s) 736, 1479, 1480
BstSFI CTRYAG 2 cut(s) 113, 131
BstUI CGCG 3 cut(s) 440, 804, 1301
BstV1I GCAGC 4 cut(s) 660, 663, 1351, 1533
BstX2I RGATCY 1 cut(s) 78
BstYI RGATCY 1 cut(s) 78
BsuI GTATCC 1 cut(s) 752
BsuRI GGCC 1 cut(s) 147
BtsCI GGATG 2 cut(s) 865, 1251
BtsI GCAGTG 1 cut(s) 852
BtsIMutI CAGTG 4 cut(s) 311, 852, 968, 1422
BtuMI TCGCGA 1 cut(s) 440
Cac8I GCNNGC 1 cut(s) 480
CaiI CAGNNNCTG 1 cut(s) 121
CciI TCATGA 1 cut(s) 910
Cfr13I GGNCC 3 cut(s) 146, 1017, 1388
Cfr9I CCCGGG 1 cut(s) 1480
CseI GACGC 1 cut(s) 1307
Csp6I GTAC 3 cut(s) 6, 315, 976
CviAII CATG 8 cut(s) 193, 208, 488, 682, 911, 1274, 1360, 1529
CviQI GTAC 3 cut(s) 6, 315, 976
DdeI CTNAG 7 cut(s) 258, 324, 543, 852, 1157, 1350, 1431
DpnI GATC 7 cut(s) 62, 80, 587, 728, 938, 960, 1142
DpnII GATC 7 cut(s) 60, 78, 585, 726, 936, 958, 1140
DraI TTTAAA 2 cut(s) 510, 900
Eco47I GGWCC 2 cut(s) 1017, 1388
Eco57I CTGAAG 3 cut(s) 287, 468, 603
Eco88I CYCGRG 1 cut(s) 1480
EcoO109I RGGNCCY 2 cut(s) 146, 1388
EcoRII CCWGG 1 cut(s) 736
FaeI CATG 8 cut(s) 196, 211, 491, 685, 914, 1277, 1363, 1532
FaqI GGGAC 2 cut(s) 1305, 1401
FatI CATG 8 cut(s) 192, 207, 487, 681, 910, 1273, 1359, 1528
FauNDI CATATG 1 cut(s) 283
FbaI TGATCA 2 cut(s) 958, 1140
Fnu4HI GCNGC 4 cut(s) 649, 652, 1365, 1547
FokI GGATG 2 cut(s) 872, 1238
Fsp4HI GCNGC 4 cut(s) 649, 652, 1365, 1547
FspBI CTAG 4 cut(s) 537, 633, 762, 1392
GluI GCNGC 4 cut(s) 649, 652, 1365, 1547
GsuI CTGGAG 1 cut(s) 836
HaeIII GGCC 1 cut(s) 147
HapII CCGG 2 cut(s) 344, 1481
HgaI GACGC 1 cut(s) 1307
Hin1II CATG 8 cut(s) 196, 211, 491, 685, 914, 1277, 1363, 1532
HincII GTYRAC 1 cut(s) 687
HindII GTYRAC 1 cut(s) 687
HindIII AAGCTT 3 cut(s) 37, 749, 785
HinfI GANTC 8 cut(s) 15, 100, 138, 850, 1096, 1151, 1323, 1450
HpaII CCGG 2 cut(s) 344, 1481
HphI GGTGA 2 cut(s) 890, 1262
Hpy166II GTNNAC 4 cut(s) 99, 615, 687, 1492
Hpy188I TCNGA 8 cut(s) 60, 448, 622, 746, 1088, 1108, 1198, 1330
Hpy8I GTNNAC 4 cut(s) 99, 615, 687, 1492
HpyAV CCTTC 7 cut(s) 65, 159, 193, 443, 656, 787, 1477
HpyCH4III ACNGT 3 cut(s) 920, 1021, 1516
HpyCH4IV ACGT 1 cut(s) 1488
HpyF10VI GCNNNNNNNGC 3 cut(s) 469, 488, 562
HpyF3I CTNAG 7 cut(s) 258, 324, 543, 852, 1157, 1350, 1431
HpySE526I ACGT 1 cut(s) 1488
Hsp92II CATG 8 cut(s) 196, 211, 491, 685, 914, 1277, 1363, 1532
KpnI GGTACC 1 cut(s) 318
Ksp22I TGATCA 2 cut(s) 958, 1140
Kzo9I GATC 7 cut(s) 60, 78, 585, 726, 936, 958, 1140
LmnI GCTCC 1 cut(s) 1501
Lsp1109I GCAGC 4 cut(s) 660, 663, 1351, 1533
MaeI CTAG 4 cut(s) 537, 633, 762, 1392
MaeII ACGT 1 cut(s) 1488
MaeIII GTNAC 2 cut(s) 847, 1484
MalI GATC 7 cut(s) 62, 80, 587, 728, 938, 960, 1142
MboI GATC 7 cut(s) 60, 78, 585, 726, 936, 958, 1140
MboII GAAGA 8 cut(s) 55, 208, 293, 304, 427, 559, 679, 1019
MflI RGATCY 1 cut(s) 78
MluCI AATT 9 cut(s) 249, 602, 672, 715, 771, 954, 1079, 1102, 1395
MlyI GAGTC 3 cut(s) 94, 844, 1160
MmeI TCCRAC 1 cut(s) 128
MnlI CCTC 7 cut(s) 267, 446, 568, 709, 1048, 1179, 1290
MseI TTAA 4 cut(s) 509, 606, 723, 899
MslI CAYNNNNRTG 2 cut(s) 94, 912
MspI CCGG 2 cut(s) 344, 1481
MspR9I CCNGG 3 cut(s) 738, 1481, 1482
Mva1269I GAATGC 1 cut(s) 1367
MvaI CCWGG 1 cut(s) 738
MvnI CGCG 3 cut(s) 440, 804, 1301
MwoI GCNNNNNNNGC 3 cut(s) 469, 488, 562
NciI CCSGG 2 cut(s) 1481, 1482
NdeI CATATG 1 cut(s) 283
NdeII GATC 7 cut(s) 60, 78, 585, 726, 936, 958, 1140
NlaIII CATG 8 cut(s) 196, 211, 491, 685, 914, 1277, 1363, 1532
NlaIV GGNNCC 4 cut(s) 316, 342, 522, 1389
NmuCI GTSAC 1 cut(s) 847
NruI TCGCGA 1 cut(s) 440
NspI RCATGY 1 cut(s) 685
OliI CACNNNNGTG 1 cut(s) 94
PagI TCATGA 1 cut(s) 910
PciI ACATGT 1 cut(s) 681
PctI GAATGC 1 cut(s) 1367
PfeI GAWTC 5 cut(s) 15, 138, 1096, 1323, 1450
PflMI CCANNNNNTGG 1 cut(s) 1529
PkrI GCNGC 4 cut(s) 650, 653, 1366, 1548
PleI GAGTC 3 cut(s) 94, 844, 1159
PpsI GAGTC 3 cut(s) 94, 844, 1159
PpuMI RGGWCCY 1 cut(s) 1388
PscI ACATGT 1 cut(s) 681
Psp5II RGGWCCY 1 cut(s) 1388
Psp6I CCWGG 1 cut(s) 736
PspGI CCWGG 1 cut(s) 736
PspN4I GGNNCC 4 cut(s) 316, 342, 522, 1389
PspPI GGNCC 3 cut(s) 146, 1017, 1388
PspPPI RGGWCCY 1 cut(s) 1388
PstI CTGCAG 1 cut(s) 135
PstNI CAGNNNCTG 1 cut(s) 121
PsuI RGATCY 1 cut(s) 78
RruI TCGCGA 1 cut(s) 440
RsaI GTAC 3 cut(s) 7, 316, 977
RsaNI GTAC 3 cut(s) 6, 315, 976
RseI CAYNNNNRTG 2 cut(s) 94, 912
SaqAI TTAA 4 cut(s) 509, 606, 723, 899
SatI GCNGC 4 cut(s) 649, 652, 1365, 1547
Sau3AI GATC 7 cut(s) 60, 78, 585, 726, 936, 958, 1140
Sau96I GGNCC 3 cut(s) 146, 1017, 1388
ScaI AGTACT 1 cut(s) 7
SchI GAGTC 3 cut(s) 94, 844, 1160
ScrFI CCNGG 3 cut(s) 738, 1481, 1482
SfcI CTRYAG 2 cut(s) 113, 131
SinI GGWCC 2 cut(s) 1017, 1388
SmaI CCCGGG 1 cut(s) 1482
SmiMI CAYNNNNRTG 2 cut(s) 94, 912
SmlI CTYRAG 2 cut(s) 275, 788
SmoI CTYRAG 2 cut(s) 275, 788
SpeI ACTAGT 1 cut(s) 761
Sse9I AATT 9 cut(s) 249, 602, 672, 715, 771, 954, 1079, 1102, 1395
SsiI CCGC 1 cut(s) 1301
SspI AATATT 1 cut(s) 1240
SspMI CTAG 4 cut(s) 537, 633, 762, 1392
StyD4I CCNGG 3 cut(s) 736, 1479, 1480
TaaI ACNGT 3 cut(s) 920, 1021, 1516
TaiI ACGT 1 cut(s) 1491
TaqI TCGA 2 cut(s) 165, 588
TasI AATT 9 cut(s) 249, 602, 672, 715, 771, 954, 1079, 1102, 1395
TatI WGTACW 2 cut(s) 5, 975
TfiI GAWTC 5 cut(s) 15, 138, 1096, 1323, 1450
Tru1I TTAA 4 cut(s) 509, 606, 723, 899
Tru9I TTAA 4 cut(s) 509, 606, 723, 899
TscAI CASTG 4 cut(s) 311, 852, 968, 1429
TseFI GTSAC 1 cut(s) 847
TseI GCWGC 4 cut(s) 648, 651, 1364, 1546
Tsp45I GTSAC 1 cut(s) 847
TspDTI ATGAA 8 cut(s) 16, 209, 410, 783, 876, 1148, 1360, 1493
TspGWI ACGGA 3 cut(s) 513, 704, 942
TspMI CCCGGG 1 cut(s) 1480
TspRI CASTG 4 cut(s) 311, 852, 968, 1429
Van91I CCANNNNNTGG 1 cut(s) 1529
VpaK11BI GGWCC 2 cut(s) 1017, 1388
XapI RAATTY 5 cut(s) 602, 672, 715, 1102, 1395
XceI RCATGY 1 cut(s) 685
XmaI CCCGGG 1 cut(s) 1480
XspI CTAG 4 cut(s) 537, 633, 762, 1392
ZrmI AGTACT 1 cut(s) 7
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.