Rroxscaffold_5G00378690

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000078
Physical Location & Seq
Reverse (-)
59143604 .. 59145624
2021 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00378690.1

Sequence Viewer

Length: 1551 bp
ATGAGTTCTATTGGAGACCTAGTGATCACAGTTTCAAGCTTTGTGTTTGTGCTTCTTCTCTTGGCACTCATCAAGATTTTTAACAAGTTATGGTGGACTCCAATTCGCGTTCAAAATTTGATGGTGTTGCAAGGAGTCAAAGGCCCTTCTTATAGATTTATCCATGGAAACACCAAAGAAATCTCCAACTTGAAGAGAGATATTATGAGCAGGTCAATGAGCTTATCGCATGACATATTATCTGCTGTTCAACCTCATATTCACTTATGGACCAGCATATATGGACAGATTTTTCTTCAGTGGTATGGTTCTCAACCTCAGTTAATTATATTGGAACCTGAACTGTGCAAAGAGATACTCAATAACAAAGATGGAGCTTATTCAAAAAAGAAGTTTCAAGGCTATGTCAAGATGCTACTAGGGGAAGGCCTGGGTTGTGCCGAAGGTGAAAAATGGGTGAAATTGCGAAAGATGGCCAACCATGCCTTTCATGGAGAGAGCTTAAAGTTTATGATTCCTGGGATGATAGCCAGTGCAGAGACAATGCTAGAAGGGTGGAAAAGTCATGAAGGAAAAGAAATCGAGGTGTTTGAATTGTTTAGGTTGTTCACTTCAGAAGTGATTTCAAGGACAGCCTTTGGCAGCAGCTACTTAGAAGGAGAGAAAGTTTTTGAAAACATTATGAAGCTATCAGTTTTCTTGGTCAAGAATTCCTTCACTATTAGGTTTCCTGGCTTAAGTGAGCTTGTCAAAACCAACGATGAGATTGAGTCAGAGAAGATTGAGAAAGGAATACGCAACTCCATAATAGGGATTATAAAGAAAAGAGAAAAGAAAACACTAATGAGTAGAGAAGATGAGAGCTTTGGGAATGATTTTCTTGGACTACTTTTAAGTGCTCATCATGATACCAATGACAAAGAGAGCATTTCAATGGATGATTTAGTTGATGAGTGCAAGACTTTTTACTTTGCAGGACAAGAAACCACTAACAGTATGCTTGCTTGGACTGTCTTTCTTCTGGCACATTATACAGATTGGCAAGAGAGAGCAAGAAAGGAGGTCCTGCAAATATTTGGCAAACAAAATCCTGATCCAGATGGCCTTACCAAGCTTAAAACAATGAGTATGATCATCAATGAGTCACTAAGGTTATACCCTCCTGTTCTGTCCATTGAGAGGAAAGTTAATTGGGAAGTTAAACTAGGAAAGCTCATTGTTCCTGCTAATGTTGAAGTGCACATTCCAACTCTAGCACTGCACCATGAGCCTCTATTCTGGGGTCAAGATGTACAACTTTTCAAGCCAGAACGATTCTCTGAGGGGGTTGCTAAAGCTACTAACAACAATATAGGTGCCTTCTTGCCCTTTGGAATGGGGCCTCGAATTTGTGCAGGCTTCAACTTTGCAACCATTGAAGCAAAGATTGCTCTGTCAATGATTCTACAGCGCTACAGCTTTACCCTTTCCCCAGGTTATGTTCACTCTCCCCATCAATATCACACTATTCGCCCACAACATGGGGTTCAGGTGATGCTCCACTCACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00905 map00905
Pfam Domains
Protein Families
p450

Protein Analysis

516

Amino Acids

58.8

Weight (kDa)

8.41

Isoelectric Point (pI)

40.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 94 - 492 2.5e-77 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000078)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15240 FvH4_3g15270 FvH4_3g15280 FvH4_3g32750 FvH4_3g32760 FvH4_3g32760 FvH4_3g32880 FvH4_4g08190 FvH4_4g29160 FvH4_4g29370 FvH4_4g29400 FvH4_4g29420 FvH4_4g29420 FvH4_4g29420 FvH4_4g29430 FvH4_4g29440 FvH4_4g29450 FvH4_4g29450 FvH4_4g29450 FvH4_4g29460 FvH4_4g29461 FvH4_4g29462 FvH4_4g29463 FvH4_4g29480 FvH4_4g29481 FvH4_4g29482 FvH4_4g29483 FvH4_4g29484 FvH4_6g26720 FvH4_6g26720
malus_domestica MD00G1065200.v1.1 MD06G1145800.v1.1 MD06G1146000.v1.1 MD06G1146700.v1.1 MD13G1031000.v1.1 MD13G1033900.v1.1 MD13G1057000.v1.1 MD13G1057100.v1.1 MD13G1057200.v1.1 MD13G1057400.v1.1 MD13G1057800.v1.1 MD13G1058000.v1.1 MD13G1058100.v1.1 MD13G1058200.v1.1 MD13G1058300.v1.1 MD13G1058500.v1.1 MD13G1058600.v1.1 MD13G1058700.v1.1 MD16G1035700.v1.1 MD16G1056400.v1.1 MD16G1056600.v1.1 MD16G1056700.v1.1 MD16G1056900.v1.1 MD16G1058100.v1.1
prunus_persica Prupe.1G291100_v2.0.a1 Prupe.1G291200_v2.0.a1 Prupe.1G291500_v2.0.a1 Prupe.1G291600_v2.0.a1 Prupe.1G291700_v2.0.a1 Prupe.1G291800_v2.0.a1 Prupe.1G291900_v2.0.a1 Prupe.1G292000_v2.0.a1 Prupe.1G292100_v2.0.a1 Prupe.1G292400_v2.0.a1 Prupe.1G292500_v2.0.a1 Prupe.1G292600_v2.0.a1 Prupe.1G292700_v2.0.a1 Prupe.1G292800_v2.0.a1 Prupe.1G296000_v2.0.a1 Prupe.1G296100_v2.0.a1 Prupe.1G296300_v2.0.a1 Prupe.1G296600_v2.0.a1 Prupe.1G296900_v2.0.a1 Prupe.1G534600_v2.0.a1 Prupe.5G046700_v2.0.a1 Prupe.8G021800_v2.0.a1 Prupe.8G026400_v2.0.a1
pyrus_communis pycom06g13510 pycom06g13530 pycom06g13540 pycom06g13570 pycom06g13590 pycom06g13620 pycom13g02710 pycom13g02930 pycom13g05100 pycom13g05110 pycom13g05140 pycom13g05160 pycom13g05170 pycom13g05190 pycom13g05200 pycom13g05210 pycom13g05220 pycom16g03060 pycom16g04940 pycom16g04960 pycom16g04990 pycom16g05000 pycom16g05080
rosa_chinensis RchiOBHm_Chr1g0337981 RchiOBHm_Chr1g0337991 RchiOBHm_Chr1g0339431 RchiOBHm_Chr4g0402401 RchiOBHm_Chr4g0420571 RchiOBHm_Chr4g0420601 RchiOBHm_Chr4g0420611 RchiOBHm_Chr4g0420621 RchiOBHm_Chr4g0420631 RchiOBHm_Chr4g0437211 RchiOBHm_Chr4g0437221 RchiOBHm_Chr4g0437251 RchiOBHm_Chr4g0437431 RchiOBHm_Chr4g0437441 RchiOBHm_Chr4g0437491 RchiOBHm_Chr4g0437501 RchiOBHm_Chr4g0437511 RchiOBHm_Chr4g0437521 RchiOBHm_Chr4g0437531 RchiOBHm_Chr4g0437541 RchiOBHm_Chr4g0437551 RchiOBHm_Chr4g0437591 RchiOBHm_Chr4g0437631 RchiOBHm_Chr4g0437641 RchiOBHm_Chr4g0437671 RchiOBHm_Chr4g0437681 RchiOBHm_Chr4g0437711 RchiOBHm_Chr4g0437731 RchiOBHm_Chr4g0437741 RchiOBHm_Chr4g0437751 RchiOBHm_Chr5g0025681 RchiOBHm_Chr5g0025711 RchiOBHm_Chr5g0025731 RchiOBHm_Chr5g0059841 RchiOBHm_Chr6g0272651
rosa_laevigata RLG00000006420 RLG00000006421 RLG00000006423 RLG00000006426 RLG00000006427 RLG00000006428 RLG00000006429 RLG00000006431 RLG00000006433 RLG00000006434 RLG00000006435 RLG00000006436 RLG00000006437 RLG00000006455 RLG00000007746 RLG00000007747 RLG00000007748 RLG00000007749 RLG00000007750 RLG00000009091 RLG00000009092 RLG00000009095 RLG00000009096 RLG00000017856 RLG00000028094 RLG00000029230 RLG00000029231 RLG00000030008 RLG00000032859 RLG00000032860 RLG00000032861 RLG00000032865 RLG00000032868 RLG00000035332
rosa_multiflora Rmu_co7986016.1_g000001 Rmu_co8226539.1_g000001 Rmu_co8349613.1_g000001 Rmu_sc0000272.1_g000014 Rmu_sc0000591.1_g000003 Rmu_sc0000613.1_g000013 Rmu_sc0001629.1_g000022 Rmu_sc0001629.1_g000025 Rmu_sc0002131.1_g000027 Rmu_sc0002137.1_g000006 Rmu_sc0002137.1_g000014 Rmu_sc0002137.1_g000019 Rmu_sc0002472.1_g000002 Rmu_sc0002472.1_g000012 Rmu_sc0002472.1_g000018 Rmu_sc0002472.1_g000034 Rmu_sc0002472.1_g000040 Rmu_sc0002472.1_g000051 Rmu_sc0002638.1_g000005 Rmu_sc0002638.1_g000010 Rmu_sc0002638.1_g000025 Rmu_sc0002638.1_g000030 Rmu_sc0002638.1_g000037 Rmu_sc0002638.1_g000042 Rmu_sc0004339.1_g000019 Rmu_sc0005580.1_g000013 Rmu_sc0006617.1_g000002 Rmu_sc0006986.1_g000003 Rmu_sc0006986.1_g000017 Rmu_sc0008352.1_g000001 Rmu_sc0008352.1_g000002 Rmu_sc0009431.1_g000011 Rmu_sc0011080.1_g000003 Rmu_sc0011080.1_g000006 Rmu_sc0016549.1_g000001 Rmu_sc0016549.1_g000002 Rmu_sc0017154.1_g000001 Rmu_sc0017155.1_g000001 Rmu_sc0028438.1_g000001 Rmu_sc0041413.1_g000001 Rmu_ssc0000330.1_g000022
rosa_roxburghii Rroxscaffold_1G00020750 Rroxscaffold_1G00053460 Rroxscaffold_1G00054250 Rroxscaffold_1G00054260 Rroxscaffold_1G00054270 Rroxscaffold_1G00054290 Rroxscaffold_2G00120210 Rroxscaffold_4G00313460 Rroxscaffold_4G00313470 Rroxscaffold_4G00330630 Rroxscaffold_5G00347070 Rroxscaffold_5G00347110 Rroxscaffold_5G00378670 Rroxscaffold_5G00378690 Rroxscaffold_5G00378720 Rroxscaffold_5G00378730 Rroxscaffold_5G00378740 Rroxscaffold_5G00378760 Rroxscaffold_5G00378780 Rroxscaffold_5G00378790 Rroxscaffold_5G00378800 Rroxscaffold_5G00378810 Rroxscaffold_5G00378820 Rroxscaffold_5G00378840 Rroxscaffold_5G00378860 Rroxscaffold_5G00378870 Rroxscaffold_7G00196060
rosa_rugosa Rorug01G0142200.1 Rorug01G0332800 Rorug02G0012200 Rorug02G0248300 Rorug03G0219000 Rorug03G0219100 Rorug03G0219200 Rorug04G0035100 Rorug04G0301500 Rorug04G0301500 Rorug04G0301700 Rorug04G0301800 Rorug04G0301800 Rorug04G0301900 Rorug04G0302000 Rorug04G0302500 Rorug04G0302600 Rorug04G0302700 Rorug04G0302800 Rorug04G0302900 Rorug04G0303000 Rorug04G0303000 Rorug04G0303100 Rorug04G0303200 Rorug04G0303300 Rorug04G0303400 Rorug04G0303500 Rorug04G0303500 Rorug05G0087800 Rorug05G0088200 Rorug05G0326300 Rorug06G0173000
rosa_samantha Rh2AG222400 Rh4DG224800 Rh4DG359900 Rh4DG360000 Rh4DG360100 Rh4DG360200 Rh4DG360300 Rh4DG360500 Rh4DG360700 Rh4DG360800 Rh4DG360900 Rh4DG361000 Rh5DG177900 Rh5DG178200 Rh5DG178400 Rh6CG187800
rosa_wichuraiana Rw1G013580 Rw4G009020 Rw4G019580 Rw4G030990 Rw4G031000 Rw4G031220 Rw4G031230 Rw4G031240 Rw4G031250 Rw4G031260 Rw4G031270 Rw4G031280 Rw4G031290 Rw4G031310 Rw4G031320 Rw4G031330 Rw4G031340 Rw4G031360 Rw4G031370 Rw5G016310 Rw5G016320 Rw5G016330 Rw5G036760 Rw6G016090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 818
Acc36I ACCTGC 1 cut(s) 201
AccB1I GGYRCC 1 cut(s) 1355
AccB7I CCANNNNNTGG 1 cut(s) 1520
AccII CGCG 1 cut(s) 108
AclWI GGATC 1 cut(s) 1088
AcoI YGGCCR 1 cut(s) 474
AcsI RAATTY 3 cut(s) 115, 709, 1386
AcuI CTGAAG 2 cut(s) 281, 597
AfaI GTAC 1 cut(s) 1293
AfeI AGCGCT 1 cut(s) 1451
AfiI CCNNNNNNNGG 3 cut(s) 810, 1179, 1520
AflII CTTAAG 1 cut(s) 736
AjnI CCWGG 4 cut(s) 429, 517, 730, 1471
Alw21I GWGCWC 2 cut(s) 901, 1242
Alw26I GTCTC 2 cut(s) 9, 533
Alw44I GTGCAC 1 cut(s) 1238
AlwI GGATC 1 cut(s) 1088
Aor51HI AGCGCT 1 cut(s) 1451
AoxI GGCC 5 cut(s) 142, 427, 474, 1102, 1379
ApaLI GTGCAC 1 cut(s) 1238
ApeKI GCWGC 2 cut(s) 642, 645
ApoI RAATTY 3 cut(s) 115, 709, 1386
Asp700I GAANNNNTTC 1 cut(s) 713
AspLEI GCGC 1 cut(s) 1452
AspS9I GGNCC 4 cut(s) 143, 270, 1063, 1379
AsuHPI GGTGA 3 cut(s) 458, 469, 1543
AvaII GGWCC 2 cut(s) 270, 1063
BaeGI GKGCMC 1 cut(s) 1242
BalI TGGCCA 1 cut(s) 476
BanI GGYRCC 1 cut(s) 1355
Bbv12I GWGCWC 2 cut(s) 901, 1242
BbvI GCAGC 2 cut(s) 654, 657
BccI CCATC 5 cut(s) 115, 365, 466, 1094, 1500
BciT130I CCWGG 4 cut(s) 431, 519, 732, 1473
BclI TGATCA 2 cut(s) 24, 1131
BcoDI GTCTC 2 cut(s) 9, 533
BfaI CTAG 5 cut(s) 20, 419, 548, 1205, 1253
BfmI CTRYAG 2 cut(s) 1445, 1453
BfoI RGCGCY 1 cut(s) 1453
BfrI CTTAAG 1 cut(s) 736
BfuAI ACCTGC 1 cut(s) 201
BisI GCNGC 2 cut(s) 643, 646
BlsI GCNGC 2 cut(s) 644, 647
Bme1390I CCNGG 4 cut(s) 431, 519, 732, 1473
Bme18I GGWCC 2 cut(s) 270, 1063
BmgT120I GGNCC 4 cut(s) 143, 270, 1063, 1379
BmiI GGNNCC 3 cut(s) 336, 1357, 1380
BmrFI CCNGG 4 cut(s) 431, 519, 732, 1473
BmsI GCATC 2 cut(s) 402, 1524
BsaI GGTCTC 1 cut(s) 9
BsaJI CCNNGG 4 cut(s) 163, 430, 518, 1471
BsaXI ACNNNNNCTCC 4 cut(s) 6, 36, 651, 681
Bsc4I CCNNNNNNNGG 3 cut(s) 810, 1179, 1520
Bse1I ACTGG 1 cut(s) 531
BseBI CCWGG 4 cut(s) 431, 519, 732, 1473
BseDI CCNNGG 4 cut(s) 163, 430, 518, 1471
BseGI GGATG 2 cut(s) 528, 943
BseLI CCNNNNNNNGG 3 cut(s) 810, 1179, 1520
BseMII CTCAG 2 cut(s) 332, 1311
BseNI ACTGG 1 cut(s) 531
BseSI GKGCMC 1 cut(s) 1242
BseXI GCAGC 2 cut(s) 654, 657
BsgI GTGCAG 3 cut(s) 555, 1244, 1413
Bsh1236I CGCG 1 cut(s) 108
BshFI GGCC 5 cut(s) 144, 429, 476, 1104, 1381
BshNI GGYRCC 1 cut(s) 1355
BsiHKAI GWGCWC 2 cut(s) 901, 1242
BslI CCNNNNNNNGG 3 cut(s) 810, 1179, 1520
BsmAI GTCTC 2 cut(s) 9, 533
BsnI GGCC 5 cut(s) 144, 429, 476, 1104, 1381
Bso31I GGTCTC 1 cut(s) 9
Bsp1286I GDGCHC 2 cut(s) 901, 1242
Bsp1407I TGTACA 1 cut(s) 1291
Bsp143I GATC 3 cut(s) 24, 1093, 1131
Bsp19I CCATGG 1 cut(s) 163
BspANI GGCC 5 cut(s) 144, 429, 476, 1104, 1381
BspCNI CTCAG 2 cut(s) 331, 1312
BspFNI CGCG 1 cut(s) 108
BspHI TCATGA 2 cut(s) 565, 904
BspLI GGNNCC 3 cut(s) 336, 1357, 1380
BspMI ACCTGC 1 cut(s) 201
BspPI GGATC 1 cut(s) 1088
BspT107I GGYRCC 1 cut(s) 1355
BspTI CTTAAG 1 cut(s) 736
BspTNI GGTCTC 1 cut(s) 9
BsrGI TGTACA 1 cut(s) 1291
BsrI ACTGG 1 cut(s) 531
BssECI CCNNGG 4 cut(s) 163, 430, 518, 1471
BssMI GATC 3 cut(s) 24, 1093, 1131
BssT1I CCWWGG 1 cut(s) 163
Bst2UI CCWGG 4 cut(s) 431, 519, 732, 1473
Bst4CI ACNGT 5 cut(s) 31, 345, 995, 1012, 1548
Bst6I CTCTTC 1 cut(s) 188
BstAFI CTTAAG 1 cut(s) 736
BstAPI GCANNNNNTGC 1 cut(s) 1427
BstAUI TGTACA 1 cut(s) 1291
BstC8I GCNNGC 2 cut(s) 1002, 1396
BstDEI CTNAG 4 cut(s) 318, 652, 1148, 1320
BstDSI CCRYGG 1 cut(s) 163
BstF5I GGATG 2 cut(s) 528, 943
BstFNI CGCG 1 cut(s) 108
BstH2I RGCGCY 1 cut(s) 1453
BstHHI GCGC 1 cut(s) 1452
BstKTI GATC 3 cut(s) 27, 1096, 1134
BstMAI GTCTC 2 cut(s) 9, 533
BstMBI GATC 3 cut(s) 24, 1093, 1131
BstMWI GCNNNNNNNGC 3 cut(s) 482, 1267, 1427
BstNI CCWGG 4 cut(s) 431, 519, 732, 1473
BstSCI CCNGG 4 cut(s) 429, 517, 730, 1471
BstSFI CTRYAG 2 cut(s) 1445, 1453
BstSLI GKGCMC 1 cut(s) 1242
BstUI CGCG 1 cut(s) 108
BstV1I GCAGC 2 cut(s) 654, 657
BsuRI GGCC 5 cut(s) 144, 429, 476, 1104, 1381
BtgI CCRYGG 1 cut(s) 163
BtsCI GGATG 2 cut(s) 528, 943
BtsI GCAGTG 1 cut(s) 1256
BtsIMutI CAGTG 4 cut(s) 305, 538, 1256, 1544
BveI ACCTGC 1 cut(s) 201
Cac8I GCNNGC 2 cut(s) 1002, 1396
CciI TCATGA 2 cut(s) 565, 904
CfoI GCGC 1 cut(s) 1452
Cfr13I GGNCC 4 cut(s) 143, 270, 1063, 1379
Csp6I GTAC 1 cut(s) 1292
CviAII CATG 8 cut(s) 164, 230, 482, 491, 566, 905, 1265, 1520
CviQI GTAC 1 cut(s) 1292
DdeI CTNAG 4 cut(s) 318, 652, 1148, 1320
DpnI GATC 3 cut(s) 26, 1095, 1133
DpnII GATC 3 cut(s) 24, 1093, 1131
EaeI YGGCCR 1 cut(s) 474
Eam1104I CTCTTC 1 cut(s) 188
EarI CTCTTC 1 cut(s) 188
Eco130I CCWWGG 1 cut(s) 163
Eco147I AGGCCT 1 cut(s) 429
Eco31I GGTCTC 1 cut(s) 9
Eco47I GGWCC 2 cut(s) 270, 1063
Eco47III AGCGCT 1 cut(s) 1451
Eco57I CTGAAG 2 cut(s) 281, 597
EcoO109I RGGNCCY 3 cut(s) 143, 1063, 1379
EcoRI GAATTC 1 cut(s) 709
EcoRII CCWGG 4 cut(s) 429, 517, 730, 1471
EcoT14I CCWWGG 1 cut(s) 163
ErhI CCWWGG 1 cut(s) 163
FaeI CATG 8 cut(s) 167, 233, 485, 494, 569, 908, 1268, 1523
FalI AAGNNNNNCTT 2 cut(s) 698, 730
FatI CATG 8 cut(s) 163, 229, 481, 490, 565, 904, 1264, 1519
FbaI TGATCA 2 cut(s) 24, 1131
Fnu4HI GCNGC 2 cut(s) 643, 646
FokI GGATG 2 cut(s) 535, 950
Fsp4HI GCNGC 2 cut(s) 643, 646
FspBI CTAG 5 cut(s) 20, 419, 548, 1205, 1253
GlaI GCGC 1 cut(s) 1451
GluI GCNGC 2 cut(s) 643, 646
HaeII RGCGCY 1 cut(s) 1453
HaeIII GGCC 5 cut(s) 144, 429, 476, 1104, 1381
HhaI GCGC 1 cut(s) 1452
Hin1II CATG 8 cut(s) 167, 233, 485, 494, 569, 908, 1268, 1523
Hin6I GCGC 1 cut(s) 1450
HinP1I GCGC 1 cut(s) 1450
HindIII AAGCTT 2 cut(s) 37, 1112
HinfI GANTC 7 cut(s) 97, 135, 514, 770, 1142, 1314, 1441
HphI GGTGA 3 cut(s) 458, 469, 1543
Hpy166II GTNNAC 4 cut(s) 96, 609, 1240, 1483
Hpy188I TCNGA 3 cut(s) 616, 775, 1321
Hpy188III TCNNGA 8 cut(s) 73, 409, 566, 706, 905, 1091, 1097, 1286
Hpy8I GTNNAC 4 cut(s) 96, 609, 1240, 1483
HpyAV CCTTC 8 cut(s) 156, 419, 437, 545, 563, 650, 724, 1369
HpyCH4III ACNGT 5 cut(s) 31, 345, 995, 1012, 1548
HpyF10VI GCNNNNNNNGC 3 cut(s) 482, 1267, 1427
HpyF3I CTNAG 4 cut(s) 318, 652, 1148, 1320
Hsp92II CATG 8 cut(s) 167, 233, 485, 494, 569, 908, 1268, 1523
HspAI GCGC 1 cut(s) 1450
Ksp22I TGATCA 2 cut(s) 24, 1131
Kzo9I GATC 3 cut(s) 24, 1093, 1131
LmnI GCTCC 2 cut(s) 374, 1542
Lsp1109I GCAGC 2 cut(s) 654, 657
LweI GCATC 2 cut(s) 402, 1524
MaeI CTAG 5 cut(s) 20, 419, 548, 1205, 1253
MaeIII GTNAC 1 cut(s) 1143
MalI GATC 3 cut(s) 26, 1095, 1133
MboI GATC 3 cut(s) 24, 1093, 1131
MboII GAAGA 6 cut(s) 47, 205, 287, 790, 866, 1010
MhlI GDGCHC 2 cut(s) 901, 1242
MlsI TGGCCA 1 cut(s) 476
MluCI AATT 8 cut(s) 102, 115, 324, 461, 593, 709, 1189, 1386
MluNI TGGCCA 1 cut(s) 476
MlyI GAGTC 4 cut(s) 91, 144, 779, 1151
MmeI TCCRAC 2 cut(s) 210, 1271
MnlI CCTC 9 cut(s) 264, 327, 577, 1054, 1170, 1173, 1281, 1315, 1392
Mox20I TGGCCA 1 cut(s) 476
MroXI GAANNNNTTC 1 cut(s) 713
MscI TGGCCA 1 cut(s) 476
MseI TTAA 8 cut(s) 81, 323, 503, 737, 893, 1116, 1188, 1200
MslI CAYNNNNRTG 1 cut(s) 932
Msp20I TGGCCA 1 cut(s) 476
MspCI CTTAAG 1 cut(s) 736
MspR9I CCNGG 4 cut(s) 431, 519, 732, 1473
MvaI CCWGG 4 cut(s) 431, 519, 732, 1473
MvnI CGCG 1 cut(s) 108
MwoI GCNNNNNNNGC 3 cut(s) 482, 1267, 1427
NcoI CCATGG 1 cut(s) 163
NdeII GATC 3 cut(s) 24, 1093, 1131
NlaIII CATG 8 cut(s) 167, 233, 485, 494, 569, 908, 1268, 1523
NlaIV GGNNCC 3 cut(s) 336, 1357, 1380
NmuCI GTSAC 1 cut(s) 1143
PagI TCATGA 2 cut(s) 565, 904
PceI AGGCCT 1 cut(s) 429
PdmI GAANNNNTTC 1 cut(s) 713
PfeI GAWTC 3 cut(s) 514, 1314, 1441
PflMI CCANNNNNTGG 1 cut(s) 1520
PkrI GCNGC 2 cut(s) 644, 647
PleI GAGTC 4 cut(s) 91, 143, 778, 1150
PpsI GAGTC 4 cut(s) 91, 143, 778, 1150
PpuMI RGGWCCY 1 cut(s) 1063
PsiI TTATAA 1 cut(s) 818
Psp5II RGGWCCY 1 cut(s) 1063
Psp6I CCWGG 4 cut(s) 429, 517, 730, 1471
PspGI CCWGG 4 cut(s) 429, 517, 730, 1471
PspN4I GGNNCC 3 cut(s) 336, 1357, 1380
PspPI GGNCC 4 cut(s) 143, 270, 1063, 1379
PspPPI RGGWCCY 1 cut(s) 1063
RsaI GTAC 1 cut(s) 1293
RsaNI GTAC 1 cut(s) 1292
RseI CAYNNNNRTG 1 cut(s) 932
SaqAI TTAA 8 cut(s) 81, 323, 503, 737, 893, 1116, 1188, 1200
SatI GCNGC 2 cut(s) 643, 646
Sau3AI GATC 3 cut(s) 24, 1093, 1131
Sau96I GGNCC 4 cut(s) 143, 270, 1063, 1379
SchI GAGTC 4 cut(s) 91, 144, 779, 1151
ScrFI CCNGG 4 cut(s) 431, 519, 732, 1473
SduI GDGCHC 2 cut(s) 901, 1242
SfaNI GCATC 2 cut(s) 402, 1524
SfcI CTRYAG 2 cut(s) 1445, 1453
SinI GGWCC 2 cut(s) 270, 1063
SmiMI CAYNNNNRTG 1 cut(s) 932
SmlI CTYRAG 1 cut(s) 736
SmoI CTYRAG 1 cut(s) 736
Sse9I AATT 8 cut(s) 102, 115, 324, 461, 593, 709, 1189, 1386
SseBI AGGCCT 1 cut(s) 429
SspI AATATT 1 cut(s) 1074
SspMI CTAG 5 cut(s) 20, 419, 548, 1205, 1253
StuI AGGCCT 1 cut(s) 429
StyD4I CCNGG 4 cut(s) 429, 517, 730, 1471
StyI CCWWGG 1 cut(s) 163
TaaI ACNGT 5 cut(s) 31, 345, 995, 1012, 1548
TaqI TCGA 2 cut(s) 582, 1384
TasI AATT 8 cut(s) 102, 115, 324, 461, 593, 709, 1189, 1386
TatI WGTACW 1 cut(s) 1291
TfiI GAWTC 3 cut(s) 514, 1314, 1441
Tru1I TTAA 8 cut(s) 81, 323, 503, 737, 893, 1116, 1188, 1200
Tru9I TTAA 8 cut(s) 81, 323, 503, 737, 893, 1116, 1188, 1200
TscAI CASTG 4 cut(s) 305, 538, 1263, 1551
TseFI GTSAC 1 cut(s) 1143
TseI GCWGC 2 cut(s) 642, 645
Tsp45I GTSAC 1 cut(s) 1143
TspDTI ATGAA 3 cut(s) 479, 582, 698
TspRI CASTG 4 cut(s) 305, 538, 1263, 1551
Van91I CCANNNNNTGG 1 cut(s) 1520
Vha464I CTTAAG 1 cut(s) 736
VneI GTGCAC 1 cut(s) 1238
VpaK11BI GGWCC 2 cut(s) 270, 1063
XapI RAATTY 3 cut(s) 115, 709, 1386
XcmI CCANNNNNNNNNTGG 1 cut(s) 488
XmnI GAANNNNTTC 1 cut(s) 713
XspI CTAG 5 cut(s) 20, 419, 548, 1205, 1253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.