Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0006429

Physical Location & Seq

Genomic Coordinates Forward (+)

10499300 .. 10501547

Gene Structure 2248 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG115700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

ATGTCTTACGAAGGCTTGGAAGGAATCACAGTATCTTTGAACATGATCGATGTGAAACCATACATCCCAATGGGTGAGAAAAACAAAAACCAGGAGGACCAAAATGCTGAAGGTTATAATTCCAAAAGGATTTTTGTGGGAGGTTTACCACATGATCTAAGAGATGAAGAATTCAAGAACTACTTTGAGAATTTTGGTAAAATTACAGACTGGGTTGTAATGTATGATAGGGAAAGCAACATGCCTAGGGGATTTGGATTCGTCACTTTTGATTCAGAGGAGGCTGTGGATGATGTGTTGCGCAAGAGGTTTCATGAATTGAATTATAAGTCTGTGGAGGCAAAGAGGGCTCACCCTAAGAATAGGAATAACATGATGATGAAACCTTATGATTGCTATAATCTTGGGACTTTCGGGCATTGTAATCCGTATTGCTTTAGTTATGGAGCTTCTTATGGGTATGGATACCGTTTAGGGTATACGTCTGATAATAATATTCAAAATTTTGGGCAGTATAATCCTTATTGCATTAGTTATGGAGCTCATTATGGGTATGGATACACTGGAGGGTTTGTGTATGTTCCAAATCCTTATAGTGACCTTCGGACTCCTATTTCTTGGGCACATTCAATTGATTATGGTGTATGGGGTAGGGAAGTTGCTAACAGCCCCAAGTCAACTAGCCGAAACTGGACGGAGCTCCCAGATGAAGTTACCGCGTTGATATTGTCACGTCTAGGAGCAATCGAGATCTTAGGGACTGTTCAGAAGGTTTGCATGAGTTGGCGCAAAATATGCAAGGACAGTCTTATGTGGCACACAATTGACATGCGCAATGATGGTTATTCTGGAGTTTTTTTCTCCCTAAAGATGGAGAAGATATGCCGCCAGGCCATTGATCGTAGCTCTGGCAATCTGGTTGATATCAGTGTGCAGAACTTTGGTAGCGATGAACTTCTCAAGTATATCACTAATAGTTCACCTGGAATCAAACGTCTCCGTTTGGAAAATTGCTATGTGACAAACAAGGGATTAATTGAAGCCGCTTCCAAACTTCAGCTGCTAGAGCACCTTGAAATTTCAAGATCACCAAACCCATACTCGCGTCAAAGTGGTCAAACTCTAGAAGTGATTGGGCGCTCTTGCCCTCTTTTAACAACATTCAAGTATAATGGCAGCTGGCAGAGATTTTACAAACGTAGGGCTACTAATGAAGATGCACTTGCCATAGCGGAAACAATGCATGGTTTACGCCAATTACAGCTTTTTGGGAATGCAGTGACTAATGATGGCTTGGCGAAGATTCTTGATTGTTGCCCTCATCTTGAGTCACTTGATCTGCGGGATTGTTTCAATCTTAATCTGGGAGGAGATTTGGAAATAAGATGTTCTAAACAAATTAAAAGACTGCAGCTTCCAGATGATTGTCCTGATGATGATTCTGAATCAACTGAGTCTTTTGGAGCATATGATCGTGAAGCGAGCGACTTTAACTTTTGTTCAGGTCACGACATTACTTCCGATTCTGATACCGAATATGATGACTATGACGTCGATGATGACTACGAATTCTCAATTGGAAAAGCTAAAGGTCAATTTTTCGACTTCTATTTGAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box F-box-like LRR_6

Protein Analysis

539

Amino Acids

61.66

Weight (kDa)

5.21

Isoelectric Point (pI)

38.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_7	PF16367	41 - 107	3.5e-09	RNA recognition motif
RRM_1	PF00076	44 - 101	3.7e-14	RNA recognition motif
F-box-like	PF12937	231 - 277	3.2e-09	F-box-like
F-box	PF00646	231 - 273	5.2e-06	F-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006429)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr5g0015111 RchiOBHm_Chr6g0277551
rosa_laevigata	RLG00000013293 RLG00000032172
rosa_multiflora	Rmu_co8060368.1_g000001 Rmu_co8498617.1_g000001 Rmu_sc0001846.1_g000030 Rmu_sc0002209.1_g000005 Rmu_sc0002209.1_g000006 Rmu_sc0003910.1_g000002
rosa_roxburghii	Rroxscaffold_1G00061410 Rroxscaffold_1G00061420 Rroxscaffold_7G00191220
rosa_rugosa	Rorug05G0024500 Rorug05G0024500 Rorug06G0109600 Rorug06G0109600
rosa_samantha	Rh5AG118800 Rh5BG116700 Rh5BG116800 Rh5CG127800 Rh5DG115700 Rh6AG220000 Rh6BG223900 Rh6CG226200 Rh6DG216800
rosa_wichuraiana	Rw6G019260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	117, 327
AasI	GACNNNNNNGTC	1 cut(s)	1550
AatII	GACGTC	1 cut(s)	1554
Acc16I	TGCGCA	2 cut(s)	302, 833
AccI	GTMKAC	1 cut(s)	479
AccII	CGCG	2 cut(s)	719, 1105
AciI	CCGC	5 cut(s)	717, 886, 1044, 1232, 1342
AcsI	RAATTY	5 cut(s)	170, 190, 502, 1077, 1568
AcuI	CTGAAG	2 cut(s)	129, 1040
AcyI	GRCGYC	1 cut(s)	1551
AfiI	CCNNNNNNNGG	1 cut(s)	871
AjiI	CACGTC	1 cut(s)	734
AjnI	CCWGG	3 cut(s)	90, 888, 982
AjuI	GAANNNNNNNTTGG	2 cut(s)	1560, 1592
AluBI	AGCT	9 cut(s)	449, 542, 700, 906, 1060, 1179, 1264, 1414, 1586
AluI	AGCT	9 cut(s)	449, 542, 700, 906, 1060, 1179, 1264, 1414, 1586
Alw21I	GWGCWC	3 cut(s)	544, 702, 1071
Alw26I	GTCTC	1 cut(s)	1001
AoxI	GGCC	1 cut(s)	891
ApeKI	GCWGC	3 cut(s)	1060, 1176, 1411
ApoI	RAATTY	5 cut(s)	170, 190, 502, 1077, 1568
AseI	ATTAAT	1 cut(s)	1034
AspA2I	CCTAGG	1 cut(s)	245
AspLEI	GCGC	4 cut(s)	303, 789, 834, 1140
AspS9I	GGNCC	1 cut(s)	97
AsuHPI	GGTGA	4 cut(s)	86, 344, 972, 1080
AvaII	GGWCC	1 cut(s)	97
AvrII	CCTAGG	1 cut(s)	245
BaeGI	GKGCMC	1 cut(s)	625
BanII	GRGCYC	3 cut(s)	352, 544, 702
Bbv12I	GWGCWC	3 cut(s)	544, 702, 1071
BbvI	GCAGC	3 cut(s)	1047, 1188, 1423
BccI	CCATC	3 cut(s)	833, 865, 1283
BciT130I	CCWGG	3 cut(s)	92, 890, 984
BciVI	GTATCC	2 cut(s)	458, 551
BcoDI	GTCTC	1 cut(s)	1001
BfaI	CTAG	5 cut(s)	246, 681, 737, 1064, 1124
BfmI	CTRYAG	1 cut(s)	1409
BfoI	RGCGCY	1 cut(s)	1141
BfuI	GTATCC	2 cut(s)	458, 551
BglII	AGATCT	1 cut(s)	750
BisI	GCNGC	5 cut(s)	886, 1044, 1061, 1177, 1412
BlnI	CCTAGG	1 cut(s)	245
BlsI	GCNGC	5 cut(s)	887, 1045, 1062, 1178, 1413
Bme1390I	CCNGG	3 cut(s)	92, 890, 984
Bme18I	GGWCC	1 cut(s)	97
BmgBI	CACGTC	1 cut(s)	734
BmgT120I	GGNCC	1 cut(s)	97
BmrFI	CCNGG	3 cut(s)	92, 890, 984
BmrI	ACTGGG	1 cut(s)	220
BmsI	GCATC	1 cut(s)	1207
BmuI	ACTGGG	1 cut(s)	220
BpmI	CTGGAG	2 cut(s)	585, 870
BpuEI	CTTGAG	2 cut(s)	944, 1346
Bsa29I	ATCGAT	1 cut(s)	48
BsaHI	GRCGYC	1 cut(s)	1551
BsaJI	CCNNGG	1 cut(s)	245
BsaXI	ACNNNNNCTCC	2 cut(s)	558, 588
Bsc4I	CCNNNNNNNGG	1 cut(s)	871
Bse1I	ACTGG	3 cut(s)	215, 568, 695
Bse3DI	GCAATG	1 cut(s)	841
BseBI	CCWGG	3 cut(s)	92, 890, 984
BseCI	ATCGAT	1 cut(s)	48
BseDI	CCNNGG	1 cut(s)	245
BseGI	GGATG	2 cut(s)	63, 295
BseLI	CCNNNNNNNGG	1 cut(s)	871
BseMI	GCAATG	1 cut(s)	841
BseMII	CTCAG	1 cut(s)	1443
BseNI	ACTGG	3 cut(s)	215, 568, 695
BseRI	GAGGAG	2 cut(s)	293, 1383
BseSI	GKGCMC	1 cut(s)	625
BseXI	GCAGC	3 cut(s)	1047, 1188, 1423
BsgI	GTGCAG	1 cut(s)	953
Bsh1236I	CGCG	2 cut(s)	719, 1105
BshFI	GGCC	1 cut(s)	893
BshVI	ATCGAT	1 cut(s)	48
BsiHKAI	GWGCWC	3 cut(s)	544, 702, 1071
BslFI	GGGAC	2 cut(s)	421, 772
BslI	CCNNNNNNNGG	1 cut(s)	871
BsmAI	GTCTC	1 cut(s)	1001
BsmBI	CGTCTC	1 cut(s)	1001
BsmFI	GGGAC	2 cut(s)	421, 772
BsmI	GAATGC	1 cut(s)	1279
BsnI	GGCC	1 cut(s)	893
Bsp1286I	GDGCHC	5 cut(s)	352, 544, 625, 702, 1071
Bsp143I	GATC	7 cut(s)	45, 154, 750, 898, 1085, 1336, 1471
BspACI	CCGC	5 cut(s)	717, 886, 1044, 1232, 1342
BspANI	GGCC	1 cut(s)	893
BspCNI	CTCAG	1 cut(s)	1444
BspDI	ATCGAT	1 cut(s)	48
BspFNI	CGCG	2 cut(s)	719, 1105
BspHI	TCATGA	1 cut(s)	313
BspMAI	CTGCAG	1 cut(s)	1413
BsrDI	GCAATG	1 cut(s)	841
BsrI	ACTGG	3 cut(s)	215, 568, 695
BssECI	CCNNGG	1 cut(s)	245
BssMI	GATC	7 cut(s)	45, 154, 750, 898, 1085, 1336, 1471
BssNAI	GTATAC	1 cut(s)	480
BssNI	GRCGYC	1 cut(s)	1551
BssT1I	CCWWGG	1 cut(s)	245
Bst1107I	GTATAC	1 cut(s)	480
Bst2UI	CCWGG	3 cut(s)	92, 890, 984
Bst4CI	ACNGT	4 cut(s)	31, 470, 763, 806
BstACI	GRCGYC	1 cut(s)	1551
BstAPI	GCANNNNNTGC	1 cut(s)	795
BstC8I	GCNNGC	2 cut(s)	1181, 1483
BstDEI	CTNAG	4 cut(s)	158, 357, 754, 1452
BstF5I	GGATG	2 cut(s)	63, 295
BstFNI	CGCG	2 cut(s)	719, 1105
BstH2I	RGCGCY	1 cut(s)	1141
BstHHI	GCGC	4 cut(s)	303, 789, 834, 1140
BstKTI	GATC	7 cut(s)	48, 157, 753, 901, 1088, 1339, 1474
BstMAI	GTCTC	1 cut(s)	1001
BstMBI	GATC	7 cut(s)	45, 154, 750, 898, 1085, 1336, 1471
BstMWI	GCNNNNNNNGC	3 cut(s)	347, 795, 1066
BstNI	CCWGG	3 cut(s)	92, 890, 984
BstNSI	RCATGY	2 cut(s)	244, 832
BstSCI	CCNGG	3 cut(s)	90, 888, 982
BstSFI	CTRYAG	1 cut(s)	1409
BstSLI	GKGCMC	1 cut(s)	625
BstUI	CGCG	2 cut(s)	719, 1105
BstV1I	GCAGC	3 cut(s)	1047, 1188, 1423
BstX2I	RGATCY	1 cut(s)	750
BstYI	RGATCY	1 cut(s)	750
BstZ17I	GTATAC	1 cut(s)	480
Bsu15I	ATCGAT	1 cut(s)	48
BsuI	GTATCC	2 cut(s)	458, 551
BsuRI	GGCC	1 cut(s)	893
BsuTUI	ATCGAT	1 cut(s)	48
BtgZI	GCGATG	1 cut(s)	963
BtrI	CACGTC	1 cut(s)	734
BtsCI	GGATG	2 cut(s)	63, 295
BtsI	GCAGTG	1 cut(s)	1284
BtsIMutI	CAGTG	3 cut(s)	561, 934, 1284
Cac8I	GCNNGC	2 cut(s)	1181, 1483
CciI	TCATGA	1 cut(s)	313
CfoI	GCGC	4 cut(s)	303, 789, 834, 1140
Cfr13I	GGNCC	1 cut(s)	97
ClaI	ATCGAT	1 cut(s)	48
CseI	GACGC	1 cut(s)	1094
CviAII	CATG	8 cut(s)	43, 152, 241, 314, 373, 778, 829, 1244
DdeI	CTNAG	4 cut(s)	158, 357, 754, 1452
DpnI	GATC	7 cut(s)	47, 156, 752, 900, 1087, 1338, 1473
DpnII	GATC	7 cut(s)	45, 154, 750, 898, 1085, 1336, 1471
DrdI	GACNNNNNNGTC	1 cut(s)	1550
DseDI	GACNNNNNNGTC	1 cut(s)	1550
Ecl136II	GAGCTC	2 cut(s)	542, 700
Eco130I	CCWWGG	1 cut(s)	245
Eco24I	GRGCYC	3 cut(s)	352, 544, 702
Eco32I	GATATC	1 cut(s)	925
Eco47I	GGWCC	1 cut(s)	97
Eco53kI	GAGCTC	2 cut(s)	542, 700
Eco57I	CTGAAG	2 cut(s)	129, 1040
EcoICRI	GAGCTC	2 cut(s)	542, 700
EcoRI	GAATTC	2 cut(s)	170, 1568
EcoRII	CCWGG	3 cut(s)	90, 888, 982
EcoRV	GATATC	1 cut(s)	925
EcoT14I	CCWWGG	1 cut(s)	245
EcoT22I	ATGCAT	1 cut(s)	1245
EcoT38I	GRGCYC	3 cut(s)	352, 544, 702
ErhI	CCWWGG	1 cut(s)	245
Esp3I	CGTCTC	1 cut(s)	1001
FaeI	CATG	8 cut(s)	46, 155, 244, 317, 376, 781, 832, 1247
FalI	AAGNNNNNCTT	4 cut(s)	167, 199, 1206, 1238
FaqI	GGGAC	2 cut(s)	421, 772
FatI	CATG	8 cut(s)	42, 151, 240, 313, 372, 777, 828, 1243
FauI	CCCGC	1 cut(s)	1335
FauNDI	CATATG	1 cut(s)	1468
FblI	GTMKAC	1 cut(s)	479
Fnu4HI	GCNGC	5 cut(s)	886, 1044, 1061, 1177, 1412
FokI	GGATG	2 cut(s)	50, 302
FriOI	GRGCYC	3 cut(s)	352, 544, 702
Fsp4HI	GCNGC	5 cut(s)	886, 1044, 1061, 1177, 1412
FspBI	CTAG	5 cut(s)	246, 681, 737, 1064, 1124
FspI	TGCGCA	2 cut(s)	302, 833
GlaI	GCGC	4 cut(s)	302, 788, 833, 1139
GluI	GCNGC	5 cut(s)	886, 1044, 1061, 1177, 1412
GsuI	CTGGAG	2 cut(s)	585, 870
HaeII	RGCGCY	1 cut(s)	1141
HaeIII	GGCC	1 cut(s)	893
HgaI	GACGC	1 cut(s)	1094
HhaI	GCGC	4 cut(s)	303, 789, 834, 1140
Hin1I	GRCGYC	1 cut(s)	1551
Hin1II	CATG	8 cut(s)	46, 155, 244, 317, 376, 781, 832, 1247
Hin6I	GCGC	4 cut(s)	301, 787, 832, 1138
HinP1I	GCGC	4 cut(s)	301, 787, 832, 1138
HincII	GTYRAC	1 cut(s)	678
HindII	GTYRAC	1 cut(s)	678
HphI	GGTGA	4 cut(s)	86, 344, 972, 1080
Hpy166II	GTNNAC	5 cut(s)	146, 480, 678, 980, 1250
Hpy188I	TCNGA	7 cut(s)	277, 487, 606, 768, 1444, 1522, 1528
Hpy8I	GTNNAC	5 cut(s)	146, 480, 678, 980, 1250
Hpy99I	CGWCG	1 cut(s)	1556
HpyAV	CCTTC	5 cut(s)	5, 14, 104, 611, 763
HpyCH4III	ACNGT	4 cut(s)	31, 470, 763, 806
HpyCH4IV	ACGT	5 cut(s)	482, 733, 994, 1198, 1551
HpyCH4V	TGCA	8 cut(s)	528, 777, 798, 934, 1220, 1243, 1277, 1411
HpyF10VI	GCNNNNNNNGC	3 cut(s)	347, 795, 1066
HpyF3I	CTNAG	4 cut(s)	158, 357, 754, 1452
HpySE526I	ACGT	5 cut(s)	482, 733, 994, 1198, 1551
Hsp92I	GRCGYC	1 cut(s)	1551
Hsp92II	CATG	8 cut(s)	46, 155, 244, 317, 376, 781, 832, 1247
HspAI	GCGC	4 cut(s)	301, 787, 832, 1138
Kzo9I	GATC	7 cut(s)	45, 154, 750, 898, 1085, 1336, 1471
LmnI	GCTCC	6 cut(s)	446, 539, 697, 705, 740, 1463
Lsp1109I	GCAGC	3 cut(s)	1047, 1188, 1423
LweI	GCATC	1 cut(s)	1207
MaeI	CTAG	5 cut(s)	246, 681, 737, 1064, 1124
MaeII	ACGT	5 cut(s)	482, 733, 994, 1198, 1551
MaeIII	GTNAC	8 cut(s)	262, 596, 712, 729, 1018, 1279, 1329, 1505
MalI	GATC	7 cut(s)	47, 156, 752, 900, 1087, 1338, 1473
MboI	GATC	7 cut(s)	45, 154, 750, 898, 1085, 1336, 1471
MboII	GAAGA	4 cut(s)	179, 889, 1226, 1312
MfeI	CAATTG	3 cut(s)	630, 822, 1575
MflI	RGATCY	1 cut(s)	750
MhlI	GDGCHC	5 cut(s)	352, 544, 625, 702, 1071
MlyI	GAGTC	3 cut(s)	601, 1337, 1463
Mph1103I	ATGCAT	1 cut(s)	1245
MseI	TTAA	5 cut(s)	1034, 1154, 1359, 1401, 1491
MslI	CAYNNNNRTG	2 cut(s)	68, 377
MspA1I	CMGCKG	2 cut(s)	1060, 1179
MspR9I	CCNGG	3 cut(s)	92, 890, 984
MunI	CAATTG	3 cut(s)	630, 822, 1575
Mva1269I	GAATGC	1 cut(s)	1279
MvaI	CCWGG	3 cut(s)	92, 890, 984
MvnI	CGCG	2 cut(s)	719, 1105
MwoI	GCNNNNNNNGC	3 cut(s)	347, 795, 1066
NdeI	CATATG	1 cut(s)	1468
NdeII	GATC	7 cut(s)	45, 154, 750, 898, 1085, 1336, 1471
NlaIII	CATG	8 cut(s)	46, 155, 244, 317, 376, 781, 832, 1247
NmuCI	GTSAC	7 cut(s)	262, 596, 729, 1018, 1279, 1329, 1505
NsbI	TGCGCA	2 cut(s)	302, 833
NsiI	ATGCAT	1 cut(s)	1245
NspI	RCATGY	2 cut(s)	244, 832
PagI	TCATGA	1 cut(s)	313
PctI	GAATGC	1 cut(s)	1279
PfeI	GAWTC	8 cut(s)	24, 258, 272, 987, 1303, 1439, 1445, 1523
PkrI	GCNGC	5 cut(s)	887, 1045, 1062, 1178, 1413
PleI	GAGTC	3 cut(s)	601, 1336, 1462
PpsI	GAGTC	3 cut(s)	601, 1336, 1462
PshBI	ATTAAT	1 cut(s)	1034
PsiI	TTATAA	2 cut(s)	117, 327
Psp124BI	GAGCTC	2 cut(s)	544, 702
Psp6I	CCWGG	3 cut(s)	90, 888, 982
PspGI	CCWGG	3 cut(s)	90, 888, 982
PspPI	GGNCC	1 cut(s)	97
PstI	CTGCAG	1 cut(s)	1413
PsuI	RGATCY	1 cut(s)	750
PvuII	CAGCTG	2 cut(s)	1060, 1179
RseI	CAYNNNNRTG	2 cut(s)	68, 377
SacI	GAGCTC	2 cut(s)	544, 702
SaqAI	TTAA	5 cut(s)	1034, 1154, 1359, 1401, 1491
SatI	GCNGC	5 cut(s)	886, 1044, 1061, 1177, 1412
Sau3AI	GATC	7 cut(s)	45, 154, 750, 898, 1085, 1336, 1471
Sau96I	GGNCC	1 cut(s)	97
SchI	GAGTC	3 cut(s)	601, 1337, 1463
ScrFI	CCNGG	3 cut(s)	92, 890, 984
SduI	GDGCHC	5 cut(s)	352, 544, 625, 702, 1071
SfaNI	GCATC	1 cut(s)	1207
SfcI	CTRYAG	1 cut(s)	1409
SinI	GGWCC	1 cut(s)	97
SmiMI	CAYNNNNRTG	2 cut(s)	68, 377
SmlI	CTYRAG	2 cut(s)	959, 1325
SmoI	CTYRAG	2 cut(s)	959, 1325
SsiI	CCGC	5 cut(s)	717, 886, 1044, 1232, 1342
SspI	AATATT	1 cut(s)	496
SspMI	CTAG	5 cut(s)	246, 681, 737, 1064, 1124
SstI	GAGCTC	2 cut(s)	544, 702
StyD4I	CCNGG	3 cut(s)	90, 888, 982
StyI	CCWWGG	1 cut(s)	245
TaaI	ACNGT	4 cut(s)	31, 470, 763, 806
TaiI	ACGT	5 cut(s)	485, 736, 997, 1201, 1554
TaqI	TCGA	4 cut(s)	48, 747, 1554, 1602
TauI	GCSGC	2 cut(s)	888, 1046
TfiI	GAWTC	8 cut(s)	24, 258, 272, 987, 1303, 1439, 1445, 1523
Tru1I	TTAA	5 cut(s)	1034, 1154, 1359, 1401, 1491
Tru9I	TTAA	5 cut(s)	1034, 1154, 1359, 1401, 1491
TscAI	CASTG	3 cut(s)	568, 934, 1284
TseFI	GTSAC	7 cut(s)	262, 596, 729, 1018, 1279, 1329, 1505
TseI	GCWGC	3 cut(s)	1060, 1176, 1411
Tsp45I	GTSAC	7 cut(s)	262, 596, 729, 1018, 1279, 1329, 1505
TspDTI	ATGAA	7 cut(s)	180, 302, 330, 395, 723, 966, 1227
TspGWI	ACGGA	3 cut(s)	417, 710, 989
TspRI	CASTG	3 cut(s)	568, 934, 1284
VpaK11BI	GGWCC	1 cut(s)	97
VspI	ATTAAT	1 cut(s)	1034
XapI	RAATTY	5 cut(s)	170, 190, 502, 1077, 1568
XbaI	TCTAGA	1 cut(s)	1123
XceI	RCATGY	2 cut(s)	244, 832
XmaJI	CCTAGG	1 cut(s)	245
XmiI	GTMKAC	1 cut(s)	479
XspI	CTAG	5 cut(s)	246, 681, 737, 1064, 1124
ZraI	GACGTC	1 cut(s)	1552
Zsp2I	ATGCAT	1 cut(s)	1245

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.