Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0003002

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG074500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGGTGTTTTACAGACTGGGATTTCTTCTGGGTTTTCTTGCTTTTATTGGAGTGCAGCTAATCCCTCTAACAATGGCTGACTGTCCATTAAATTTAAGTGGATCAAATGCTACTCTAGTAGCCTCTTTGTGCTCGAATAGAGATGACAGAGGGAAATGTTGCCGCTACATAAATGCTTTCGTGGCAGTATCTATTGCTCAGTATGCAAATGCAACAAGCAACTTAGGGGTACCTTCAAATTTATCCAACGCATGCCTCGATTTCATATCACAAACCTTAGAATTGCATGGAATTCCCCAAAATGCAACAGCTTTCTGTGGTTTGGGGACAAAAATCCCAGTAAATTATGAGTGTAAGGGTCGAACAACTGTTACACAGATGGTGCAGTCTCCGAAATTCCCTGATGTCGTGGAAAATTGCAAAGTACCACTGTCAGGGGAAAGTAATTGCAAGAAGTGTATAAATGCTGGCATTGTATATCTTCATAACCTATTAGGAACTGAAAATAACATTACATTCAGTACCTGCCGTGATGCAACTTTTGCTGCAGTAGCAAGCCAAGTTGATAATGCTTCAGCTGTTGGCATTGCAAGCTGTTTCTTTCAAGTCCAGGGGCTTAACATCCTACCAGTTGCAGAGCCATCACCATCATCCACCCCAAAGGCATCTCCAAGTCCATTGGTGGCTGCTAGCCCAAATCAACACTTGTCAGGTGTAGATTTAAGTGAAACACATCATCCCTACCATCTGACCCTGGTTCCAGGTATCGGCATTGCAGTAACTGCTGTTGCTGTAATGATGCTTTTAGTCCTGATAGTTCTTATTCGTAAGAAAAGCAGAGAGCTAGTGGATTTTGAAGATATAGATAAGACATCAAAATCATTTCCCCCACCTCGTCCTTTAAGGAAATTTCATGAAGGTCCTCCATCTATGTTTCAAAAATTCAGCTACAAGGAGATAAAGAAGGCGACAGACAATTTCAATACTACCATTGGACAAGGGGGATTTGGAACTGTGTACAAAGCTCACTTTAGTGATGGTTTAGTAGCAGCAGTGAAGCGGATGAACAAAGTTTCCGAGCAGGGGGAGCATGAGTTCTGCAGAGAGATAGTGCTTCTTGCCAGGTTGCATCATCGGCATCTTGTTTCTCTTAGGGGCTTCTGCATTGAGAAACATGAGAGGTTTCTGATGTATGAGTACATGGCAAATGGTAGCCTGAAGGATCATCTTCATTCTCCCAATAGAACTCCTCTAAGTTGGCAGACTAGAGTTCAAATTGCCATTGATGTGGCTAATGCTCTGGAGTATCTCCATTTCTATTGTGATCCTCCTCTTTGCCATAGAGATATCAAGTCCAGCAATATCTTACTGGATGAAAATTTTGTGGCCAAGGTTGCAGACTTTGGCCTTGTACATGCATCAAAAGATGGTTCAGTTTTCTTTGAACCGGTAAATACTGATATCCGGGGAACTCCAGGTTATATGGATCCCGAGTATGTCGTTACTCAGGAGTTAACAGAGAAAAGTGATGTATACAGCTATGGTGTCCTATTGTTGGAGATAGTGACTGGGAGACGAGCGATACAAGACAACAGGAATTTGGTTGAATGGTCACAACAATACATGGAATCGGAATCAAGGGTACCTGATTTAGTCGATCCCAGTATAAGGGACTCATTTAACTTGGATCAGCTTCAAACACTCATTTCTGTTGTCAGCTGGTGCACCCAGAGAGAAGGCCAGGACAGGCCTTCTATTAAACAGGTGCTTAGGCTTTTGTATGAGAGTTCGGACCCGATGCATAGTGGATTTATAGCATCTGTAGACGACGAAGAGTACGGAGAGACAGAAGGAAGAGGAAGGAACAGTAAAGGCAAGATGCATAGGAATGACATGATCTGTCACAGTGGGGATGGGAGATATCTGGCTTCTTCTTCAAGTACATCCAGGTCATATTGTAGCAGAAGCTTCTTGCTTGAAACTGGGTCTCCACAATCCCCTCCGAATATTTTTTCTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

673

Amino Acids

74.43

Weight (kDa)

6.41

Isoelectric Point (pI)

43.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPARK	PF19160	25 - 170	2.1e-24	SPARK
PK_Tyr_Ser-Thr	PF07714	327 - 592	1.4e-46	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	328 - 591	1.6e-49	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003002)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49730 AT1G49730 AT1G49730 AT1G49730 AT1G49730 AT3G19300
fragaria_vesca	FvH4_2g05840 FvH4_2g05840 FvH4_2g05840 FvH4_2g05840 FvH4_2g05840
malus_domestica	MD05G1082700.v1.1
prunus_persica	Prupe.8G127400_v2.0.a1 Prupe.8G127400_v2.0.a1 Prupe.8G127400_v2.0.a1 Prupe.8G127400_v2.0.a1 Prupe.8G127400_v2.0.a1
pyrus_communis	pycom05g07770
rosa_chinensis	RchiOBHm_Chr4g0408511 RchiOBHm_Chr6g0257781
rosa_laevigata	RLG00000014723 RLG00000014972
rosa_multiflora	Rmu_co8277925.1_g000001 Rmu_co8468953.1_g000001 Rmu_sc0003520.1_g000001
rosa_roxburghii	Rroxscaffold_5G00352930 Rroxscaffold_7G00208940
rosa_rugosa	Rorug05G0568100 Rorug05G0568200 Rorug05G0568300 Rorug05G0568400
rosa_samantha	Rh2AG563700 Rh6AG085100 Rh6AG085200 Rh6BG079500 Rh6CG074500 Rh6DG071400
rosa_wichuraiana	Rw6G007650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	533
Acc65I	GGTACC	2 cut(s)	229, 1642
AccB1I	GGYRCC	2 cut(s)	229, 1642
AccI	GTMKAC	2 cut(s)	1533, 1824
AciI	CCGC	2 cut(s)	163, 1060
AclWI	GGATC	7 cut(s)	109, 1230, 1319, 1481, 1494, 1652, 1695
AcoI	YGGCCR	1 cut(s)	1386
AcsI	RAATTY	8 cut(s)	91, 238, 291, 395, 908, 941, 1378, 1597
AcuI	CTGAAG	2 cut(s)	558, 1238
AfaI	GTAC	9 cut(s)	231, 426, 523, 1019, 1199, 1413, 1644, 1838, 1942
AfiI	CCNNNNNNNGG	5 cut(s)	434, 767, 1083, 1555, 1668
AgeI	ACCGGT	1 cut(s)	1447
AjnI	CCWGG	7 cut(s)	609, 753, 760, 1121, 1474, 1740, 1946
AleI	CACNNNNGTG	1 cut(s)	1032
AloI	GAACNNNNNNTCC	4 cut(s)	1058, 1079, 1090, 1111
Alw21I	GWGCWC	2 cut(s)	134, 1727
Alw26I	GTCTC	4 cut(s)	393, 1567, 1838, 1992
Alw44I	GTGCAC	1 cut(s)	1723
AlwI	GGATC	7 cut(s)	109, 1230, 1319, 1481, 1494, 1652, 1695
AlwNI	CAGNNNCTG	2 cut(s)	525, 782
Ama87I	CYCGRG	1 cut(s)	1490
AoxI	GGCC	4 cut(s)	1386, 1405, 1738, 1748
ApaLI	GTGCAC	1 cut(s)	1723
ApeKI	GCWGC	4 cut(s)	55, 545, 686, 1049
ApoI	RAATTY	8 cut(s)	91, 238, 291, 395, 908, 941, 1378, 1597
AsiGI	ACCGGT	1 cut(s)	1447
Asp718I	GGTACC	2 cut(s)	229, 1642
AspS9I	GGNCC	2 cut(s)	920, 1792
AsuC2I	CCSGG	1 cut(s)	1466
AsuHPI	GGTGA	1 cut(s)	636
AsuNHI	GCTAGC	1 cut(s)	689
AvaI	CYCGRG	1 cut(s)	1490
AvaII	GGWCC	2 cut(s)	920, 1792
BaeGI	GKGCMC	1 cut(s)	1727
BalI	TGGCCA	1 cut(s)	1388
BamHI	GGATCC	1 cut(s)	1486
BanI	GGYRCC	2 cut(s)	229, 1642
Bbv12I	GWGCWC	2 cut(s)	134, 1727
BbvI	GCAGC	4 cut(s)	67, 532, 673, 1061
BccI	CCATC	8 cut(s)	373, 649, 655, 753, 934, 1031, 1421, 1907
BceAI	ACGGC	1 cut(s)	513
BciT130I	CCWGG	7 cut(s)	611, 755, 762, 1123, 1476, 1742, 1948
BcnI	CCSGG	1 cut(s)	1466
BcoDI	GTCTC	4 cut(s)	393, 1567, 1838, 1992
BfaI	CTAG	4 cut(s)	116, 690, 845, 1266
BfmI	CTRYAG	3 cut(s)	546, 1099, 1821
BfuAI	ACCTGC	1 cut(s)	533
BisI	GCNGC	5 cut(s)	56, 163, 546, 687, 1050
BlsI	GCNGC	5 cut(s)	57, 164, 547, 688, 1051
Bme1390I	CCNGG	8 cut(s)	611, 755, 762, 1123, 1466, 1476, 1742, 1948
Bme18I	GGWCC	2 cut(s)	920, 1792
BmeT110I	CYCGRG	1 cut(s)	1490
BmgT120I	GGNCC	2 cut(s)	920, 1792
BmiI	GGNNCC	5 cut(s)	231, 759, 1488, 1644, 1794
BmrFI	CCNGG	8 cut(s)	611, 755, 762, 1123, 1466, 1476, 1742, 1948
BmrI	ACTGGG	5 cut(s)	26, 332, 1578, 1656, 1992
BmsI	GCATC	9 cut(s)	523, 674, 789, 1138, 1147, 1427, 1788, 1826, 1869
BmtI	GCTAGC	1 cut(s)	693
BmuI	ACTGGG	5 cut(s)	26, 332, 1578, 1656, 1992
BpmI	CTGGAG	2 cut(s)	1322, 1458
Bpu10I	CCTNAGC	1 cut(s)	1769
BpuMI	CCSGG	1 cut(s)	1466
BsaI	GGTCTC	1 cut(s)	1992
BsaJI	CCNNGG	4 cut(s)	610, 753, 1389, 1465
BsaWI	WCCGGW	1 cut(s)	1447
BsaXI	ACNNNNNCTCC	4 cut(s)	1079, 1109, 1972, 2002
Bsc4I	CCNNNNNNNGG	5 cut(s)	434, 767, 1083, 1555, 1668
Bse118I	RCCGGY	1 cut(s)	1447
Bse1I	ACTGG	7 cut(s)	21, 338, 629, 1374, 1573, 1662, 1987
Bse3DI	GCAATG	2 cut(s)	585, 771
BseBI	CCWGG	7 cut(s)	611, 755, 762, 1123, 1476, 1742, 1948
BseDI	CCNNGG	4 cut(s)	610, 753, 1389, 1465
BseGI	GGATG	7 cut(s)	621, 650, 736, 1068, 1378, 1918, 1943
BseLI	CCNNNNNNNGG	5 cut(s)	434, 767, 1083, 1555, 1668
BseMI	GCAATG	2 cut(s)	585, 771
BseMII	CTCAG	2 cut(s)	212, 1520
BseNI	ACTGG	7 cut(s)	21, 338, 629, 1374, 1573, 1662, 1987
BseRI	GAGGAG	2 cut(s)	1239, 1320
BseSI	GKGCMC	1 cut(s)	1727
BseXI	GCAGC	4 cut(s)	67, 532, 673, 1061
BsgI	GTGCAG	2 cut(s)	74, 404
BshFI	GGCC	4 cut(s)	1388, 1407, 1740, 1750
BshNI	GGYRCC	2 cut(s)	229, 1642
BshTI	ACCGGT	1 cut(s)	1447
BsiHKAI	GWGCWC	2 cut(s)	134, 1727
BsiHKCI	CYCGRG	1 cut(s)	1490
BsiSI	CCGG	2 cut(s)	1448, 1465
BslFI	GGGAC	2 cut(s)	340, 1685
BslI	CCNNNNNNNGG	5 cut(s)	434, 767, 1083, 1555, 1668
BsmAI	GTCTC	4 cut(s)	393, 1567, 1838, 1992
BsmBI	CGTCTC	1 cut(s)	1567
BsmFI	GGGAC	2 cut(s)	340, 1685
BsnI	GGCC	4 cut(s)	1388, 1407, 1740, 1750
Bso31I	GGTCTC	1 cut(s)	1992
BsoBI	CYCGRG	1 cut(s)	1490
Bsp1286I	GDGCHC	2 cut(s)	134, 1727
Bsp1407I	TGTACA	2 cut(s)	1017, 1411
Bsp143I	GATC	7 cut(s)	101, 1222, 1324, 1486, 1657, 1687, 1896
BspACI	CCGC	2 cut(s)	163, 1060
BspANI	GGCC	4 cut(s)	1388, 1407, 1740, 1750
BspCNI	CTCAG	2 cut(s)	211, 1519
BspHI	TCATGA	1 cut(s)	913
BspLI	GGNNCC	5 cut(s)	231, 759, 1488, 1644, 1794
BspMAI	CTGCAG	2 cut(s)	550, 1103
BspMI	ACCTGC	1 cut(s)	533
BspOI	GCTAGC	1 cut(s)	693
BspPI	GGATC	7 cut(s)	109, 1230, 1319, 1481, 1494, 1652, 1695
BspT107I	GGYRCC	2 cut(s)	229, 1642
BspTNI	GGTCTC	1 cut(s)	1992
BsrDI	GCAATG	2 cut(s)	585, 771
BsrFI	RCCGGY	1 cut(s)	1447
BsrGI	TGTACA	2 cut(s)	1017, 1411
BsrI	ACTGG	7 cut(s)	21, 338, 629, 1374, 1573, 1662, 1987
BssAI	RCCGGY	1 cut(s)	1447
BssECI	CCNNGG	4 cut(s)	610, 753, 1389, 1465
BssMI	GATC	7 cut(s)	101, 1222, 1324, 1486, 1657, 1687, 1896
BssNAI	GTATAC	1 cut(s)	1534
BssT1I	CCWWGG	1 cut(s)	1389
Bst1107I	GTATAC	1 cut(s)	1534
Bst2UI	CCWGG	7 cut(s)	611, 755, 762, 1123, 1476, 1742, 1948
Bst4CI	ACNGT	6 cut(s)	83, 370, 432, 1015, 1868, 1907
Bst6I	CTCTTC	2 cut(s)	1827, 1849
BstAPI	GCANNNNNTGC	2 cut(s)	542, 782
BstAUI	TGTACA	2 cut(s)	1017, 1411
BstC8I	GCNNGC	5 cut(s)	253, 469, 556, 592, 691
BstDEI	CTNAG	7 cut(s)	198, 223, 277, 1151, 1253, 1506, 1769
BstF5I	GGATG	7 cut(s)	621, 650, 736, 1068, 1378, 1918, 1943
BstKTI	GATC	7 cut(s)	104, 1225, 1327, 1489, 1660, 1690, 1899
BstMAI	GTCTC	4 cut(s)	393, 1567, 1838, 1992
BstMBI	GATC	7 cut(s)	101, 1222, 1324, 1486, 1657, 1687, 1896
BstMWI	GCNNNNNNNGC	9 cut(s)	182, 203, 542, 551, 591, 782, 1087, 1135, 1394
BstNI	CCWGG	7 cut(s)	611, 755, 762, 1123, 1476, 1742, 1948
BstNSI	RCATGY	2 cut(s)	255, 1418
BstSCI	CCNGG	8 cut(s)	609, 753, 760, 1121, 1464, 1474, 1740, 1946
BstSFI	CTRYAG	3 cut(s)	546, 1099, 1821
BstSLI	GKGCMC	1 cut(s)	1727
BstV1I	GCAGC	4 cut(s)	67, 532, 673, 1061
BstX2I	RGATCY	1 cut(s)	1486
BstXI	CCANNNNNNTGG	1 cut(s)	1288
BstYI	RGATCY	1 cut(s)	1486
BstZ17I	GTATAC	1 cut(s)	1534
BsuRI	GGCC	4 cut(s)	1388, 1407, 1740, 1750
BtsCI	GGATG	7 cut(s)	621, 650, 736, 1068, 1378, 1918, 1943
BtsI	GCAGTG	1 cut(s)	1059
BtsIMutI	CAGTG	3 cut(s)	428, 1059, 1912
BveI	ACCTGC	1 cut(s)	533
Cac8I	GCNNGC	5 cut(s)	253, 469, 556, 592, 691
CaiI	CAGNNNCTG	2 cut(s)	525, 782
CciI	TCATGA	1 cut(s)	913
Cfr10I	RCCGGY	1 cut(s)	1447
Cfr13I	GGNCC	2 cut(s)	920, 1792
Csp6I	GTAC	9 cut(s)	230, 425, 522, 1018, 1198, 1412, 1643, 1837, 1941
CspAI	ACCGGT	1 cut(s)	1447
CviAII	CATG	9 cut(s)	252, 287, 914, 1091, 1175, 1201, 1415, 1624, 1894
CviQI	GTAC	9 cut(s)	230, 425, 522, 1018, 1198, 1412, 1643, 1837, 1941
DdeI	CTNAG	7 cut(s)	198, 223, 277, 1151, 1253, 1506, 1769
DpnI	GATC	7 cut(s)	103, 1224, 1326, 1488, 1659, 1689, 1898
DpnII	GATC	7 cut(s)	101, 1222, 1324, 1486, 1657, 1687, 1896
EaeI	YGGCCR	1 cut(s)	1386
Eam1104I	CTCTTC	2 cut(s)	1827, 1849
EarI	CTCTTC	2 cut(s)	1827, 1849
Eco130I	CCWWGG	1 cut(s)	1389
Eco147I	AGGCCT	1 cut(s)	1750
Eco31I	GGTCTC	1 cut(s)	1992
Eco32I	GATATC	3 cut(s)	1348, 1462, 1922
Eco47I	GGWCC	2 cut(s)	920, 1792
Eco57I	CTGAAG	2 cut(s)	558, 1238
Eco88I	CYCGRG	1 cut(s)	1490
EcoO109I	RGGNCCY	1 cut(s)	920
EcoRI	GAATTC	1 cut(s)	291
EcoRII	CCWGG	7 cut(s)	609, 753, 760, 1121, 1474, 1740, 1946
EcoRV	GATATC	3 cut(s)	1348, 1462, 1922
EcoT14I	CCWWGG	1 cut(s)	1389
EcoT22I	ATGCAT	3 cut(s)	1420, 1803, 1884
ErhI	CCWWGG	1 cut(s)	1389
Esp3I	CGTCTC	1 cut(s)	1567
FaeI	CATG	9 cut(s)	255, 290, 917, 1094, 1178, 1204, 1418, 1627, 1897
FaqI	GGGAC	2 cut(s)	340, 1685
FatI	CATG	9 cut(s)	251, 286, 913, 1090, 1174, 1200, 1414, 1623, 1893
FblI	GTMKAC	2 cut(s)	1533, 1824
Fnu4HI	GCNGC	5 cut(s)	56, 163, 546, 687, 1050
FokI	GGATG	7 cut(s)	608, 637, 723, 1075, 1385, 1925, 1930
Fsp4HI	GCNGC	5 cut(s)	56, 163, 546, 687, 1050
FspBI	CTAG	4 cut(s)	116, 690, 845, 1266
GluI	GCNGC	5 cut(s)	56, 163, 546, 687, 1050
GsuI	CTGGAG	2 cut(s)	1322, 1458
HaeIII	GGCC	4 cut(s)	1388, 1407, 1740, 1750
HapII	CCGG	2 cut(s)	1448, 1465
Hin1II	CATG	9 cut(s)	255, 290, 917, 1094, 1178, 1204, 1418, 1627, 1897
HincII	GTYRAC	1 cut(s)	1515
HindII	GTYRAC	1 cut(s)	1515
HindIII	AAGCTT	1 cut(s)	1966
HinfI	GANTC	3 cut(s)	1628, 1634, 1673
HpaI	GTTAAC	1 cut(s)	1515
HpaII	CCGG	2 cut(s)	1448, 1465
HphI	GGTGA	1 cut(s)	636
Hpy166II	GTNNAC	5 cut(s)	1018, 1515, 1534, 1725, 1825
Hpy188I	TCNGA	7 cut(s)	393, 750, 1078, 1188, 1633, 1792, 2004
Hpy188III	TCNNGA	5 cut(s)	811, 914, 1301, 1490, 1508
Hpy8I	GTNNAC	5 cut(s)	1018, 1515, 1534, 1725, 1825
Hpy99I	CGWCG	1 cut(s)	1832
HpyAV	CCTTC	8 cut(s)	243, 911, 958, 1213, 1730, 1761, 1844, 1854
HpyCH4III	ACNGT	6 cut(s)	83, 370, 432, 1015, 1868, 1907
HpyF10VI	GCNNNNNNNGC	9 cut(s)	182, 203, 542, 551, 591, 782, 1087, 1135, 1394
HpyF3I	CTNAG	7 cut(s)	198, 223, 277, 1151, 1253, 1506, 1769
Hsp92II	CATG	9 cut(s)	255, 290, 917, 1094, 1178, 1204, 1418, 1627, 1897
KpnI	GGTACC	2 cut(s)	233, 1646
KspAI	GTTAAC	1 cut(s)	1515
Kzo9I	GATC	7 cut(s)	101, 1222, 1324, 1486, 1657, 1687, 1896
LmnI	GCTCC	1 cut(s)	1087
Lsp1109I	GCAGC	4 cut(s)	67, 532, 673, 1061
LweI	GCATC	9 cut(s)	523, 674, 789, 1138, 1147, 1427, 1788, 1826, 1869
MaeI	CTAG	4 cut(s)	116, 690, 845, 1266
MaeIII	GTNAC	6 cut(s)	370, 778, 1501, 1564, 1611, 1901
MalI	GATC	7 cut(s)	103, 1224, 1326, 1488, 1659, 1689, 1898
MboI	GATC	7 cut(s)	101, 1222, 1324, 1486, 1657, 1687, 1896
MboII	GAAGA	8 cut(s)	17, 473, 869, 1220, 1844, 1866, 1923, 1926
MflI	RGATCY	1 cut(s)	1486
MhlI	GDGCHC	2 cut(s)	134, 1727
MlsI	TGGCCA	1 cut(s)	1388
MluNI	TGGCCA	1 cut(s)	1388
MlyI	GAGTC	1 cut(s)	1667
MmeI	TCCRAC	2 cut(s)	270, 1536
Mox20I	TGGCCA	1 cut(s)	1388
Mph1103I	ATGCAT	3 cut(s)	1420, 1803, 1884
MscI	TGGCCA	1 cut(s)	1388
MseI	TTAA	8 cut(s)	89, 95, 618, 722, 902, 1514, 1680, 1758
MslI	CAYNNNNRTG	3 cut(s)	1032, 1286, 1887
Msp20I	TGGCCA	1 cut(s)	1388
MspA1I	CMGCKG	2 cut(s)	578, 1719
MspI	CCGG	2 cut(s)	1448, 1465
MspR9I	CCNGG	8 cut(s)	611, 755, 762, 1123, 1466, 1476, 1742, 1948
MvaI	CCWGG	7 cut(s)	611, 755, 762, 1123, 1476, 1742, 1948
MwoI	GCNNNNNNNGC	9 cut(s)	182, 203, 542, 551, 591, 782, 1087, 1135, 1394
NciI	CCSGG	1 cut(s)	1466
NdeII	GATC	7 cut(s)	101, 1222, 1324, 1486, 1657, 1687, 1896
NheI	GCTAGC	1 cut(s)	689
NlaIII	CATG	9 cut(s)	255, 290, 917, 1094, 1178, 1204, 1418, 1627, 1897
NlaIV	GGNNCC	5 cut(s)	231, 759, 1488, 1644, 1794
NmuCI	GTSAC	3 cut(s)	1564, 1611, 1901
NsiI	ATGCAT	3 cut(s)	1420, 1803, 1884
NspI	RCATGY	2 cut(s)	255, 1418
OliI	CACNNNNGTG	1 cut(s)	1032
PaeI	GCATGC	1 cut(s)	255
PagI	TCATGA	1 cut(s)	913
PceI	AGGCCT	1 cut(s)	1750
PcsI	WCGNNNNNNNCGW	1 cut(s)	255
PfeI	GAWTC	2 cut(s)	1628, 1634
PinAI	ACCGGT	1 cut(s)	1447
PkrI	GCNGC	5 cut(s)	57, 164, 547, 688, 1051
PleI	GAGTC	1 cut(s)	1667
PpsI	GAGTC	1 cut(s)	1667
PpuMI	RGGWCCY	1 cut(s)	920
Psp5II	RGGWCCY	1 cut(s)	920
Psp6I	CCWGG	7 cut(s)	609, 753, 760, 1121, 1474, 1740, 1946
PspGI	CCWGG	7 cut(s)	609, 753, 760, 1121, 1474, 1740, 1946
PspN4I	GGNNCC	5 cut(s)	231, 759, 1488, 1644, 1794
PspPI	GGNCC	2 cut(s)	920, 1792
PspPPI	RGGWCCY	1 cut(s)	920
PsrI	GAACNNNNNNTAC	2 cut(s)	355, 387
PstI	CTGCAG	2 cut(s)	550, 1103
PstNI	CAGNNNCTG	2 cut(s)	525, 782
PsuI	RGATCY	1 cut(s)	1486
PvuII	CAGCTG	2 cut(s)	578, 1719
RsaI	GTAC	9 cut(s)	231, 426, 523, 1019, 1199, 1413, 1644, 1838, 1942
RsaNI	GTAC	9 cut(s)	230, 425, 522, 1018, 1198, 1412, 1643, 1837, 1941
RseI	CAYNNNNRTG	3 cut(s)	1032, 1286, 1887
SaqAI	TTAA	8 cut(s)	89, 95, 618, 722, 902, 1514, 1680, 1758
SatI	GCNGC	5 cut(s)	56, 163, 546, 687, 1050
Sau3AI	GATC	7 cut(s)	101, 1222, 1324, 1486, 1657, 1687, 1896
Sau96I	GGNCC	2 cut(s)	920, 1792
SchI	GAGTC	1 cut(s)	1667
ScrFI	CCNGG	8 cut(s)	611, 755, 762, 1123, 1466, 1476, 1742, 1948
SduI	GDGCHC	2 cut(s)	134, 1727
SfaNI	GCATC	9 cut(s)	523, 674, 789, 1138, 1147, 1427, 1788, 1826, 1869
SfcI	CTRYAG	3 cut(s)	546, 1099, 1821
SinI	GGWCC	2 cut(s)	920, 1792
SmiMI	CAYNNNNRTG	3 cut(s)	1032, 1286, 1887
SphI	GCATGC	1 cut(s)	255
SseBI	AGGCCT	1 cut(s)	1750
SsiI	CCGC	2 cut(s)	163, 1060
SspI	AATATT	1 cut(s)	2008
SspMI	CTAG	4 cut(s)	116, 690, 845, 1266
StuI	AGGCCT	1 cut(s)	1750
StyD4I	CCNGG	8 cut(s)	609, 753, 760, 1121, 1464, 1474, 1740, 1946
StyI	CCWWGG	1 cut(s)	1389
TaaI	ACNGT	6 cut(s)	83, 370, 432, 1015, 1868, 1907
TaqI	TCGA	4 cut(s)	134, 258, 361, 1656
TatI	WGTACW	4 cut(s)	1017, 1197, 1411, 1940
TauI	GCSGC	1 cut(s)	165
TfiI	GAWTC	2 cut(s)	1628, 1634
Tru1I	TTAA	8 cut(s)	89, 95, 618, 722, 902, 1514, 1680, 1758
Tru9I	TTAA	8 cut(s)	89, 95, 618, 722, 902, 1514, 1680, 1758
TscAI	CASTG	3 cut(s)	435, 1059, 1912
TseFI	GTSAC	3 cut(s)	1564, 1611, 1901
TseI	GCWGC	4 cut(s)	55, 545, 686, 1049
Tsp45I	GTSAC	3 cut(s)	1564, 1611, 1901
TspDTI	ATGAA	7 cut(s)	253, 473, 902, 930, 1079, 1220, 1389
TspGWI	ACGGA	1 cut(s)	1854
TspRI	CASTG	3 cut(s)	435, 1059, 1912
VneI	GTGCAC	1 cut(s)	1723
VpaK11BI	GGWCC	2 cut(s)	920, 1792
XapI	RAATTY	8 cut(s)	91, 238, 291, 395, 908, 941, 1378, 1597
XceI	RCATGY	2 cut(s)	255, 1418
XmiI	GTMKAC	2 cut(s)	1533, 1824
XspI	CTAG	4 cut(s)	116, 690, 845, 1266
Zsp2I	ATGCAT	3 cut(s)	1420, 1803, 1884

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.