No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23080 AT2G23080 |
| fragaria_vesca | FvH4_1g17250 FvH4_1g17250 FvH4_6g05990 |
| malus_domestica | MD02G1182400.v1.1 MD15G1293600.v1.1 |
| prunus_persica | Prupe.6G223900_v2.0.a1 |
| pyrus_communis | pycom15g25650 |
| rosa_chinensis | RchiOBHm_Chr2g0107441 RchiOBHm_Chr4g0408851 RchiOBHm_Chr5g0055571 RchiOBHm_Chr6g0286251 |
| rosa_laevigata | RLG00000017579 RLG00000022601 RLG00000025400 |
| rosa_multiflora | Rmu_co8110362.1_g000001 Rmu_sc0002169.1_g000006 Rmu_sc0025013.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00136340 Rroxscaffold_4G00301400 |
| rosa_rugosa | Rorug02G0143600 Rorug02G0143600 |
| rosa_samantha | Rh2AG193800 Rh2BG206000 Rh2CG199000 Rh2DG125100 Rh2DG201000 Rh5CG397800 Rh6BG117600 Rh6CG295200 Rh6DG104300 Rh6DG287100 |
| rosa_wichuraiana | Rw2G015350 Rw3G004930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 227 |
| AcvI | CACGTG | 1 cut(s) | 152 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 206 |
| AgsI | TTSAA | 2 cut(s) | 133, 266 |
| AjnI | CCWGG | 1 cut(s) | 231 |
| AluBI | AGCT | 2 cut(s) | 78, 92 |
| AluI | AGCT | 2 cut(s) | 78, 92 |
| AoxI | GGCC | 1 cut(s) | 234 |
| ApeKI | GCWGC | 1 cut(s) | 102 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 78 |
| BbrPI | CACGTG | 1 cut(s) | 152 |
| BbvI | GCAGC | 1 cut(s) | 114 |
| BciT130I | CCWGG | 1 cut(s) | 233 |
| BfaI | CTAG | 2 cut(s) | 71, 89 |
| BisI | GCNGC | 1 cut(s) | 103 |
| BlsI | GCNGC | 1 cut(s) | 104 |
| Bme1390I | CCNGG | 1 cut(s) | 233 |
| BmrFI | CCNGG | 1 cut(s) | 233 |
| BsaAI | YACGTR | 1 cut(s) | 152 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 206 |
| BseBI | CCWGG | 1 cut(s) | 233 |
| BseGI | GGATG | 1 cut(s) | 262 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 206 |
| BseRI | GAGGAG | 1 cut(s) | 155 |
| BseXI | GCAGC | 1 cut(s) | 114 |
| BshFI | GGCC | 1 cut(s) | 236 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 206 |
| BsnI | GGCC | 1 cut(s) | 236 |
| BspANI | GGCC | 1 cut(s) | 236 |
| Bst2UI | CCWGG | 1 cut(s) | 233 |
| Bst4CI | ACNGT | 1 cut(s) | 201 |
| BstBAI | YACGTR | 1 cut(s) | 152 |
| BstC8I | GCNNGC | 1 cut(s) | 124 |
| BstF5I | GGATG | 1 cut(s) | 262 |
| BstNI | CCWGG | 1 cut(s) | 233 |
| BstSCI | CCNGG | 1 cut(s) | 231 |
| BstV1I | GCAGC | 1 cut(s) | 114 |
| BsuRI | GGCC | 1 cut(s) | 236 |
| BtsCI | GGATG | 1 cut(s) | 262 |
| Cac8I | GCNNGC | 1 cut(s) | 124 |
| CseI | GACGC | 1 cut(s) | 161 |
| CviAII | CATG | 2 cut(s) | 169, 244 |
| CviJI | RGCY | 4 cut(s) | 12, 78, 92, 236 |
| CviKI_1 | RGCY | 4 cut(s) | 12, 78, 92, 236 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 227 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 227 |
| Eco147I | AGGCCT | 1 cut(s) | 236 |
| Eco72I | CACGTG | 1 cut(s) | 152 |
| EcoRII | CCWGG | 1 cut(s) | 231 |
| FaeI | CATG | 2 cut(s) | 172, 247 |
| FaiI | YATR | 5 cut(s) | 39, 128, 170, 224, 245 |
| FatI | CATG | 2 cut(s) | 168, 243 |
| Fnu4HI | GCNGC | 1 cut(s) | 103 |
| FokI | GGATG | 1 cut(s) | 269 |
| Fsp4HI | GCNGC | 1 cut(s) | 103 |
| FspBI | CTAG | 2 cut(s) | 71, 89 |
| GluI | GCNGC | 1 cut(s) | 103 |
| HaeIII | GGCC | 1 cut(s) | 236 |
| HgaI | GACGC | 1 cut(s) | 161 |
| Hin1II | CATG | 2 cut(s) | 172, 247 |
| HindIII | AAGCTT | 1 cut(s) | 76 |
| HinfI | GANTC | 2 cut(s) | 25, 54 |
| Hpy188I | TCNGA | 3 cut(s) | 24, 30, 53 |
| Hpy188III | TCNNGA | 1 cut(s) | 65 |
| HpyAV | CCTTC | 1 cut(s) | 71 |
| HpyCH4III | ACNGT | 1 cut(s) | 201 |
| HpyCH4IV | ACGT | 1 cut(s) | 151 |
| HpyCH4V | TGCA | 2 cut(s) | 41, 122 |
| HpySE526I | ACGT | 1 cut(s) | 151 |
| Hsp92II | CATG | 2 cut(s) | 172, 247 |
| LmnI | GCTCC | 1 cut(s) | 247 |
| LpnPI | CCDG | 3 cut(s) | 108, 218, 245 |
| Lsp1109I | GCAGC | 1 cut(s) | 114 |
| MaeI | CTAG | 2 cut(s) | 71, 89 |
| MaeII | ACGT | 1 cut(s) | 151 |
| MaeIII | GTNAC | 2 cut(s) | 152, 218 |
| MfeI | CAATTG | 1 cut(s) | 133 |
| MluCI | AATT | 1 cut(s) | 133 |
| MnlI | CCTC | 3 cut(s) | 109, 173, 176 |
| MroXI | GAANNNNTTC | 1 cut(s) | 78 |
| MspR9I | CCNGG | 1 cut(s) | 233 |
| MunI | CAATTG | 1 cut(s) | 133 |
| MvaI | CCWGG | 1 cut(s) | 233 |
| NlaIII | CATG | 2 cut(s) | 172, 247 |
| NmuCI | GTSAC | 2 cut(s) | 152, 218 |
| PceI | AGGCCT | 1 cut(s) | 236 |
| PdmI | GAANNNNTTC | 1 cut(s) | 78 |
| PfeI | GAWTC | 2 cut(s) | 25, 54 |
| PkrI | GCNGC | 1 cut(s) | 104 |
| PmaCI | CACGTG | 1 cut(s) | 152 |
| PmlI | CACGTG | 1 cut(s) | 152 |
| Ppu21I | YACGTR | 1 cut(s) | 152 |
| Psp6I | CCWGG | 1 cut(s) | 231 |
| PspCI | CACGTG | 1 cut(s) | 152 |
| PspGI | CCWGG | 1 cut(s) | 231 |
| SatI | GCNGC | 1 cut(s) | 103 |
| ScrFI | CCNGG | 1 cut(s) | 233 |
| SetI | ASST | 6 cut(s) | 63, 80, 94, 120, 154, 159 |
| Sse9I | AATT | 1 cut(s) | 133 |
| SseBI | AGGCCT | 1 cut(s) | 236 |
| SspMI | CTAG | 2 cut(s) | 71, 89 |
| StuI | AGGCCT | 1 cut(s) | 236 |
| StyD4I | CCNGG | 1 cut(s) | 231 |
| TaaI | ACNGT | 1 cut(s) | 201 |
| TaiI | ACGT | 1 cut(s) | 154 |
| TasI | AATT | 1 cut(s) | 133 |
| TfiI | GAWTC | 2 cut(s) | 25, 54 |
| TseFI | GTSAC | 2 cut(s) | 152, 218 |
| TseI | GCWGC | 1 cut(s) | 102 |
| Tsp45I | GTSAC | 2 cut(s) | 152, 218 |
| TspDTI | ATGAA | 1 cut(s) | 273 |
| TspGWI | ACGGA | 1 cut(s) | 37 |
| XmnI | GAANNNNTTC | 1 cut(s) | 78 |
| XspI | CTAG | 2 cut(s) | 71, 89 |