Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0004271

Physical Location & Seq

Genomic Coordinates Reverse (-)

34906640 .. 34925956

Gene Structure 19317 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG195000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

ATGGGGAGAGCATCATTTCCGTCTGGTTTTCGGTTTTCTCCAACTGATGTTGAGCTTGTGAAATACTATTTGAAGAGGAAAGTAATGGGGAAAAGACTTCATGTTAAAGTCATTGCCGAGGTTGACATTTACAAGTACGCTCCTTGGGATCTTCCAGACAAATCTTGTTGGCGATTTGGAGACCTAAAATGGTACTTCTTTTCTCCTATAGAAAAGAAATATGCAACTGGGGCTAGAGTGAATCGTGCCACTGAAGCTGGGTACTGGAAAATGTCAGGAAAGGATAGATCTGTTAATTACAATGGTGAACTGGTCGGCTGGATCAAGACTTTAGTTTTTTACACAGGTCGACCTTCACGAGGAGAACGGACAGATTGGGTTTTGCATGAGTATAGGCTTGAAGATAAGGGCGTGCCTCAGGAATCATATGTTTTATGTGTACTTTTCCAAAAGGAAGGGCAAGGGCCAAAAAATGGTGCACAATATGGTGCACCCTTTAAAGAGGAAGATTGGACTGATGATGAGGTTGAAATCTGTTTAGACACTGTCCCACATGCAAATAGGCCTGAGCCAGACCTTGTTCTGCCTAGGGGATATAATAGTTCCAGTCTTACTAGCACAGATTGCCCTGACGGTATGTGCATAGGCCCTTCATCTGAATCCTGCATATCAGATGTTGTACCACCTTCTTGCAATATTTTCCACTCAGTTCCCAGTAATTCTGTTACAACAGAGAAGCAGTCGGTTTCAGCCAATGCTGATATCCTGTCCATGTTAGATTGCTTTGTGGAAGAAAGCACTTTCCTTATCAATGGCAATGACAAAAGTAAGAAGCTTGATAGCCTGATTCATTCTGGAAATACAAGTACTACACAGAAGCTTGATATTCTGAATCCTAGAAATGCAAATGCTACAGAAGGGCGTGATAATATTCCTCATTCTGGAAATGCAAATGCTACAGATCATTTTAATAGAAGTGATATTTATAGAGATTTAGCAGACTTGGGCAACTTGGGTAGAGTTGAAGACGGGCATAATTTATCGATCTTTAACTCTCGAACCTTGTCAAGTGCTCGCCGCTGCCGCTCTCTCAAGCTCAGGAGAAGGAGGAGGAGAATGTCTCACAGGAAGTTTGAGCACCCCAGGCATGGATCCCTTGGATTTCTTCCAAGGAAGCGAGCTGCTCGTCACAGAGGAAAAGTGAAGGCTTTCCCCAAGGATGACCCATCCAAGCCCTGCAAGCTCACTGCTTTCCTTGGTTACAAGGCTGGGATGACTCACATTGTCAGGGATGTCGAGAAACCTGGATCAAAGCTGCACAAGAAGGAGACATGTGAGGCTGTCACTATCATTGAGGCTCCTCCAATGGTCGTTGTTGGTGTTGTGGGTTATGTGAAGACACCCCGCGGCCTTCGTTCTTTGAACACAGTGTGGGCTCAGCATCTCAGTGAGGAGGTTAAGAGGAGGTTTTACAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCGCAAAGTACTCCAAGACCTATGAAACTGACGAAGGAAAGAAGAATATTGAAGGGCAGTTTGAGAAACTGATTAAATATGCTACTGTTATTCGAGTTTTGGCTCACACTCAGATCAGGAAGATGAAGGGTTTGAAGCAGAAGAAAGCACATCTCATGGAGATCCAGGTGAATGGTGGCACAATTGCTCAAAAGGTTGAATTTGCAAAAAGCTTCTTTGAGAAGCAAATCCCTATTGATGCCGTCTTCCAGAAAGATGAAATGATTGACATCATTGGTGTGACAAAGGGTAAGGGTTATGAAGGTGTTGTTACTCGTTGGGGTGTCACCCGGCTTCCCCGTAAGACCCATAGGGGTCTGCGTAAGGTTGCTTGTATTGGTGCATGGCATCCTGCCAGAGTTTCATTTACAGTTGCCAGGGCTGGTCAAAATGGATACCATCACCGTACTGAAATGAACAAGAAAATTTACAAGCTTGGAAAGGCTGGACAAGAGTCACACACTGCTGTCACTGAGTTTGACAGGACTGAGAAGGACATCACTCCAATTGGTGGCTTCCCTCATTATGGTGTGGTGAAAGATGACTACATTCTGATCAAGGGATGCTGTGTTGGACCCAAGAAGAGGGTTGTTACCCTTCGCCAGTCCCTGCTCAAGCAGACCTCCCGTCTTGCTCTTGAGGATATCAAGCTCAAGTTCATTGATACCTCCTCAAAGTTCGGGCATGGTCGCTTCCAGACTACACAGGAGAAACAGAAGTACTATGGACGACTCAAGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000027 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015934 GO:0016043 GO:0019538 GO:0022607 GO:0022613 GO:0022618 GO:0022625 GO:0022626 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0042254 GO:0042255 GO:0042273 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0065003 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L3

Protein Analysis

761

Amino Acids

86.34

Weight (kDa)

9.73

Isoelectric Point (pI)

40.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	7 - 133	3.6e-43	No apical meristem (NAM) protein
Ribosomal_L3	PF00297	373 - 742	3.5e-194	Ribosomal protein L3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004271)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64060
fragaria_vesca	FvH4_2g13320 FvH4_2g13320 FvH4_2g13320 FvH4_2g13320 FvH4_2g13320 FvH4_2g13320 FvH4_2g13320
malus_domestica	MD04G1043700.v1.1 MD05G1029800.v1.1 MD10G1030400.v1.1
prunus_persica	Prupe.7G092400_v2.0.a1 Prupe.7G092400_v2.0.a1 Prupe.7G092400_v2.0.a1 Prupe.7G092400_v2.0.a1 Prupe.7G092400_v2.0.a1 Prupe.8G035300_v2.0.a1 Prupe.8G035400_v2.0.a1 Prupe.8G035500_v2.0.a1
pyrus_communis	pycom05g02120 pycom10g01970
rosa_chinensis	RchiOBHm_Chr6g0274751
rosa_laevigata	RLG00000013525
rosa_multiflora	Rmu_sc0006223.1_g000007
rosa_roxburghii	Rroxscaffold_7G00193970
rosa_rugosa	Rorug06G0083700 Rorug06G0083800
rosa_samantha	Rh6AG199600 Rh6BG203300 Rh6CG203500 Rh6DG195000
rosa_wichuraiana	Rw6G017350

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	473, 2054
AccBSI	CCGCTC	1 cut(s)	1086
AccI	GTMKAC	1 cut(s)	349
AccII	CGCG	1 cut(s)	1407
AciI	CCGC	4 cut(s)	1078, 1084, 1405, 1407
AclWI	GGATC	6 cut(s)	156, 329, 1146, 1159, 1315, 1660
AcsI	RAATTY	2 cut(s)	1703, 1968
AcuI	CTGAAG	1 cut(s)	273
AdeI	CACNNNGTG	1 cut(s)	1431
AfaI	GTAC	9 cut(s)	137, 194, 263, 441, 681, 868, 1514, 1951, 2264
AfiI	CCNNNNNNNGG	7 cut(s)	359, 473, 941, 1148, 2054, 2069, 2127
AflIII	ACRYGT	1 cut(s)	1331
AgsI	TTSAA	8 cut(s)	73, 401, 530, 1025, 1423, 1556, 1639, 1703
AhdI	GACNNNNNGTC	1 cut(s)	2169
AjnI	CCWGG	4 cut(s)	1142, 1303, 1668, 1919
Alw21I	GWGCWC	4 cut(s)	481, 493, 1075, 1140
Alw26I	GTCTC	3 cut(s)	174, 1125, 1322
Alw44I	GTGCAC	2 cut(s)	477, 489
AlwI	GGATC	6 cut(s)	156, 329, 1146, 1159, 1315, 1660
AlwNI	CAGNNNCTG	1 cut(s)	2152
AoxI	GGCC	4 cut(s)	464, 563, 646, 1408
ApaLI	GTGCAC	2 cut(s)	477, 489
ApeKI	GCWGC	3 cut(s)	1080, 1181, 1315
ApoI	RAATTY	2 cut(s)	1703, 1968
Asp700I	GAANNNNTTC	2 cut(s)	1208, 1502
AspA2I	CCTAGG	1 cut(s)	587
AspS9I	GGNCC	3 cut(s)	464, 647, 2117
AsuC2I	CCSGG	1 cut(s)	1834
AsuHPI	GGTGA	5 cut(s)	317, 1684, 1822, 1937, 2089
AvaII	GGWCC	1 cut(s)	2117
AvrII	CCTAGG	1 cut(s)	587
AxyI	CCTNAGG	1 cut(s)	417
BaeGI	GKGCMC	2 cut(s)	481, 493
BamHI	GGATCC	1 cut(s)	1151
BanII	GRGCYC	1 cut(s)	1438
BauI	CACGAG	1 cut(s)	357
BbsI	GAAGAC	3 cut(s)	1032, 1403, 1741
Bbv12I	GWGCWC	4 cut(s)	481, 493, 1075, 1140
BbvI	GCAGC	3 cut(s)	1067, 1168, 1302
BccI	CCATC	2 cut(s)	1234, 1950
BceAI	ACGGC	1 cut(s)	1730
BciT130I	CCWGG	4 cut(s)	1144, 1305, 1670, 1921
BciVI	GTATCC	1 cut(s)	1931
BclI	TGATCA	1 cut(s)	2097
BcnI	CCSGG	1 cut(s)	1834
BcoDI	GTCTC	3 cut(s)	174, 1125, 1322
BfaI	CTAG	4 cut(s)	234, 588, 615, 897
BfmI	CTRYAG	3 cut(s)	207, 912, 957
BfuI	GTATCC	1 cut(s)	1931
BglII	AGATCT	1 cut(s)	287
BisI	GCNGC	6 cut(s)	1078, 1081, 1084, 1182, 1316, 1408
BlnI	CCTAGG	1 cut(s)	587
BlpI	GCTNAGC	1 cut(s)	1437
BlsI	GCNGC	6 cut(s)	1079, 1082, 1085, 1183, 1317, 1409
BmcAI	AGTACT	3 cut(s)	868, 1514, 2264
Bme1390I	CCNGG	5 cut(s)	1144, 1305, 1670, 1834, 1921
Bme18I	GGWCC	1 cut(s)	2117
BmeRI	GACNNNNNGTC	1 cut(s)	2169
BmgT120I	GGNCC	3 cut(s)	464, 647, 2117
BmiI	GGNNCC	3 cut(s)	1153, 1359, 2119
BmrFI	CCNGG	5 cut(s)	1144, 1305, 1670, 1834, 1921
BmrI	ACTGGG	2 cut(s)	237, 708
BmsI	GCATC	5 cut(s)	20, 1450, 1732, 1900, 2096
BmuI	ACTGGG	2 cut(s)	237, 708
BoxI	GACNNNNGTC	1 cut(s)	1996
BpiI	GAAGAC	3 cut(s)	1032, 1403, 1741
BplI	GAGNNNNNCTC	2 cut(s)	1105, 1137
Bpu10I	CCTNAGC	2 cut(s)	567, 1097
Bpu1102I	GCTNAGC	1 cut(s)	1437
BpuEI	CTTGAG	5 cut(s)	1076, 2141, 2180, 2201, 2261
BpuMI	CCSGG	1 cut(s)	1834
Bsa29I	ATCGAT	1 cut(s)	1043
BsaBI	GATNNNNATC	1 cut(s)	1772
BsaI	GGTCTC	1 cut(s)	174
Bsc4I	CCNNNNNNNGG	7 cut(s)	359, 473, 941, 1148, 2054, 2069, 2127
Bse1I	ACTGG	7 cut(s)	232, 269, 315, 606, 714, 1484, 2146
Bse21I	CCTNAGG	1 cut(s)	417
Bse3DI	GCAATG	2 cut(s)	111, 823
Bse8I	GATNNNNATC	1 cut(s)	1772
BseBI	CCWGG	4 cut(s)	1144, 1305, 1670, 1921
BseCI	ATCGAT	1 cut(s)	1043
BseGI	GGATG	6 cut(s)	1225, 1226, 1278, 1297, 1891, 2111
BseJI	GATNNNNATC	1 cut(s)	1772
BseLI	CCNNNNNNNGG	7 cut(s)	359, 473, 941, 1148, 2054, 2069, 2127
BseMI	GCAATG	2 cut(s)	111, 823
BseMII	CTCAG	9 cut(s)	431, 558, 720, 1111, 1451, 1459, 1628, 2007, 2022
BseNI	ACTGG	7 cut(s)	232, 269, 315, 606, 714, 1484, 2146
BseRI	GAGGAG	7 cut(s)	375, 1123, 1126, 1350, 1466, 1477, 2203
BseSI	GKGCMC	2 cut(s)	481, 493
BseXI	GCAGC	3 cut(s)	1067, 1168, 1302
BseYI	CCCAGC	2 cut(s)	257, 1268
BsgI	GTGCAG	1 cut(s)	1301
Bsh1236I	CGCG	1 cut(s)	1407
BshFI	GGCC	4 cut(s)	466, 565, 648, 1410
BshVI	ATCGAT	1 cut(s)	1043
BsiHKAI	GWGCWC	4 cut(s)	481, 493, 1075, 1140
BsiSI	CCGG	1 cut(s)	1834
BslFI	GGGAC	2 cut(s)	533, 2134
BslI	CCNNNNNNNGG	7 cut(s)	359, 473, 941, 1148, 2054, 2069, 2127
BsmAI	GTCTC	3 cut(s)	174, 1125, 1322
BsmFI	GGGAC	2 cut(s)	533, 2134
BsnI	GGCC	4 cut(s)	466, 565, 648, 1410
Bso31I	GGTCTC	1 cut(s)	174
Bsp1286I	GDGCHC	5 cut(s)	481, 493, 1075, 1140, 1438
Bsp1720I	GCTNAGC	1 cut(s)	1437
BspACI	CCGC	4 cut(s)	1078, 1084, 1405, 1407
BspANI	GGCC	4 cut(s)	466, 565, 648, 1410
BspCNI	CTCAG	9 cut(s)	430, 559, 719, 1110, 1450, 1458, 1627, 2008, 2023
BspDI	ATCGAT	1 cut(s)	1043
BspFNI	CGCG	1 cut(s)	1407
BspLI	GGNNCC	3 cut(s)	1153, 1359, 2119
BspPI	GGATC	6 cut(s)	156, 329, 1146, 1159, 1315, 1660
BspTNI	GGTCTC	1 cut(s)	174
BsrBI	CCGCTC	1 cut(s)	1086
BsrDI	GCAATG	2 cut(s)	111, 823
BsrI	ACTGG	7 cut(s)	232, 269, 315, 606, 714, 1484, 2146
BssSI	CACGAG	1 cut(s)	357
BssT1I	CCWWGG	6 cut(s)	143, 587, 1156, 1169, 1215, 1255
Bst2BI	CACGAG	1 cut(s)	357
Bst2UI	CCWGG	4 cut(s)	1144, 1305, 1670, 1921
Bst4CI	ACNGT	6 cut(s)	547, 635, 1429, 1591, 1915, 1949
Bst6I	CTCTTC	2 cut(s)	68, 2120
BstAPI	GCANNNNNTGC	1 cut(s)	624
BstC8I	GCNNGC	4 cut(s)	413, 1075, 1179, 1241
BstDEI	CTNAG	9 cut(s)	417, 567, 706, 1097, 1437, 1445, 1614, 2016, 2031
BstDSI	CCRYGG	1 cut(s)	1405
BstENI	CCTNNNNNAGG	1 cut(s)	357
BstF5I	GGATG	6 cut(s)	1225, 1226, 1278, 1297, 1891, 2111
BstFNI	CGCG	1 cut(s)	1407
BstMAI	GTCTC	3 cut(s)	174, 1125, 1322
BstMWI	GCNNNNNNNGC	6 cut(s)	230, 254, 624, 1083, 1144, 1240
BstNI	CCWGG	4 cut(s)	1144, 1305, 1670, 1921
BstNSI	RCATGY	2 cut(s)	557, 1335
BstPAI	GACNNNNGTC	1 cut(s)	1996
BstSCI	CCNGG	5 cut(s)	1142, 1303, 1668, 1832, 1919
BstSFI	CTRYAG	3 cut(s)	207, 912, 957
BstSLI	GKGCMC	2 cut(s)	481, 493
BstUI	CGCG	1 cut(s)	1407
BstV1I	GCAGC	3 cut(s)	1067, 1168, 1302
BstV2I	GAAGAC	3 cut(s)	1032, 1403, 1741
BstX2I	RGATCY	4 cut(s)	148, 287, 1151, 1665
BstXI	CCANNNNNNTGG	1 cut(s)	1676
BstYI	RGATCY	4 cut(s)	148, 287, 1151, 1665
Bsu15I	ATCGAT	1 cut(s)	1043
Bsu36I	CCTNAGG	1 cut(s)	417
BsuI	GTATCC	1 cut(s)	1931
BsuRI	GGCC	4 cut(s)	466, 565, 648, 1410
BsuTUI	ATCGAT	1 cut(s)	1043
BtgI	CCRYGG	1 cut(s)	1405
BtsCI	GGATG	6 cut(s)	1225, 1226, 1278, 1297, 1891, 2111
BtsI	GCAGTG	2 cut(s)	1245, 2004
BtsIMutI	CAGTG	7 cut(s)	249, 543, 1245, 1434, 1453, 2004, 2013
Cac8I	GCNNGC	4 cut(s)	413, 1075, 1179, 1241
CaiI	CAGNNNCTG	1 cut(s)	2152
Cfr13I	GGNCC	3 cut(s)	464, 647, 2117
Cfr42I	CCGCGG	1 cut(s)	1408
ClaI	ATCGAT	1 cut(s)	1043
Csp6I	GTAC	9 cut(s)	136, 193, 262, 440, 680, 867, 1513, 1950, 2263
CviAII	CATG	9 cut(s)	101, 386, 554, 772, 1148, 1332, 1660, 1887, 2228
CviQI	GTAC	9 cut(s)	136, 193, 262, 440, 680, 867, 1513, 1950, 2263
DdeI	CTNAG	9 cut(s)	417, 567, 706, 1097, 1437, 1445, 1614, 2016, 2031
DraI	TTTAAA	1 cut(s)	499
DraIII	CACNNNGTG	1 cut(s)	1431
DriI	GACNNNNNGTC	1 cut(s)	2169
Eam1104I	CTCTTC	2 cut(s)	68, 2120
Eam1105I	GACNNNNNGTC	1 cut(s)	2169
EarI	CTCTTC	2 cut(s)	68, 2120
Eco130I	CCWWGG	6 cut(s)	143, 587, 1156, 1169, 1215, 1255
Eco147I	AGGCCT	1 cut(s)	565
Eco24I	GRGCYC	1 cut(s)	1438
Eco31I	GGTCTC	1 cut(s)	174
Eco32I	GATATC	2 cut(s)	763, 2188
Eco47I	GGWCC	1 cut(s)	2117
Eco57I	CTGAAG	1 cut(s)	273
Eco81I	CCTNAGG	1 cut(s)	417
EcoNI	CCTNNNNNAGG	1 cut(s)	357
EcoO109I	RGGNCCY	1 cut(s)	647
EcoRII	CCWGG	4 cut(s)	1142, 1303, 1668, 1919
EcoRV	GATATC	2 cut(s)	763, 2188
EcoT14I	CCWWGG	6 cut(s)	143, 587, 1156, 1169, 1215, 1255
EcoT38I	GRGCYC	1 cut(s)	1438
ErhI	CCWWGG	6 cut(s)	143, 587, 1156, 1169, 1215, 1255
FaeI	CATG	9 cut(s)	104, 389, 557, 775, 1151, 1335, 1663, 1890, 2231
FaqI	GGGAC	2 cut(s)	533, 2134
FatI	CATG	9 cut(s)	100, 385, 553, 771, 1147, 1331, 1659, 1886, 2227
FauI	CCCGC	1 cut(s)	1412
FauNDI	CATATG	1 cut(s)	427
FbaI	TGATCA	1 cut(s)	2097
FblI	GTMKAC	1 cut(s)	349
Fnu4HI	GCNGC	6 cut(s)	1078, 1081, 1084, 1182, 1316, 1408
FokI	GGATG	6 cut(s)	1213, 1232, 1285, 1304, 1878, 2118
FriOI	GRGCYC	1 cut(s)	1438
Fsp4HI	GCNGC	6 cut(s)	1078, 1081, 1084, 1182, 1316, 1408
FspBI	CTAG	4 cut(s)	234, 588, 615, 897
GluI	GCNGC	6 cut(s)	1078, 1081, 1084, 1182, 1316, 1408
GsaI	CCCAGC	2 cut(s)	261, 1272
HaeIII	GGCC	4 cut(s)	466, 565, 648, 1410
HapII	CCGG	1 cut(s)	1834
Hin1II	CATG	9 cut(s)	104, 389, 557, 775, 1151, 1335, 1663, 1890, 2231
HincII	GTYRAC	2 cut(s)	124, 350
HindII	GTYRAC	2 cut(s)	124, 350
HindIII	AAGCTT	4 cut(s)	833, 878, 1714, 1976
HinfI	GANTC	8 cut(s)	241, 422, 659, 847, 892, 1276, 1997, 2274
HpaII	CCGG	1 cut(s)	1834
HphI	GGTGA	5 cut(s)	317, 1684, 1822, 1937, 2089
Hpy166II	GTNNAC	6 cut(s)	124, 308, 350, 440, 479, 491
Hpy188I	TCNGA	5 cut(s)	658, 673, 891, 1617, 2097
Hpy8I	GTNNAC	6 cut(s)	124, 308, 350, 440, 479, 491
HpyCH4III	ACNGT	6 cut(s)	547, 635, 1429, 1591, 1915, 1949
HpyF10VI	GCNNNNNNNGC	6 cut(s)	230, 254, 624, 1083, 1144, 1240
HpyF3I	CTNAG	9 cut(s)	417, 567, 706, 1097, 1437, 1445, 1614, 2016, 2031
Hsp92II	CATG	9 cut(s)	104, 389, 557, 775, 1151, 1335, 1663, 1890, 2231
Ksp22I	TGATCA	1 cut(s)	2097
KspI	CCGCGG	1 cut(s)	1408
LmnI	GCTCC	2 cut(s)	145, 1363
Lsp1109I	GCAGC	3 cut(s)	1067, 1168, 1302
LweI	GCATC	5 cut(s)	20, 1450, 1732, 1900, 2096
MaeI	CTAG	4 cut(s)	234, 588, 615, 897
MbiI	CCGCTC	1 cut(s)	1086
MfeI	CAATTG	2 cut(s)	1686, 2049
MflI	RGATCY	4 cut(s)	148, 287, 1151, 1665
MhlI	GDGCHC	5 cut(s)	481, 493, 1075, 1140, 1438
MluCI	AATT	7 cut(s)	295, 718, 1036, 1686, 1703, 1968, 2049
MlyI	GAGTC	3 cut(s)	1270, 2006, 2268
MmeI	TCCRAC	2 cut(s)	65, 2095
MroXI	GAANNNNTTC	2 cut(s)	1208, 1502
MseI	TTAA	7 cut(s)	105, 294, 498, 969, 1050, 1458, 1578
MslI	CAYNNNNRTG	3 cut(s)	1446, 1781, 2070
MspA1I	CMGCKG	2 cut(s)	1080, 1407
MspI	CCGG	1 cut(s)	1834
MspR9I	CCNGG	5 cut(s)	1144, 1305, 1670, 1834, 1921
MunI	CAATTG	2 cut(s)	1686, 2049
MvaI	CCWGG	4 cut(s)	1144, 1305, 1670, 1921
MvnI	CGCG	1 cut(s)	1407
MwoI	GCNNNNNNNGC	6 cut(s)	230, 254, 624, 1083, 1144, 1240
NciI	CCSGG	1 cut(s)	1834
NdeI	CATATG	1 cut(s)	427
NlaIII	CATG	9 cut(s)	104, 389, 557, 775, 1151, 1335, 1663, 1890, 2231
NlaIV	GGNNCC	3 cut(s)	1153, 1359, 2119
NmeAIII	GCCGAG	1 cut(s)	142
NmuCI	GTSAC	6 cut(s)	1187, 1342, 1783, 1828, 1998, 2011
NspI	RCATGY	2 cut(s)	557, 1335
PceI	AGGCCT	1 cut(s)	565
PciI	ACATGT	1 cut(s)	1331
PcsI	WCGNNNNNNNCGW	1 cut(s)	355
PdmI	GAANNNNTTC	2 cut(s)	1208, 1502
PfeI	GAWTC	5 cut(s)	241, 422, 659, 847, 892
PflFI	GACNNNGTC	1 cut(s)	545
PflMI	CCANNNNNTGG	2 cut(s)	473, 2054
PkrI	GCNGC	6 cut(s)	1079, 1082, 1085, 1183, 1317, 1409
PleI	GAGTC	3 cut(s)	1270, 2005, 2268
PpsI	GAGTC	3 cut(s)	1270, 2005, 2268
PscI	ACATGT	1 cut(s)	1331
PshAI	GACNNNNGTC	1 cut(s)	1996
Psp6I	CCWGG	4 cut(s)	1142, 1303, 1668, 1919
PspFI	CCCAGC	2 cut(s)	257, 1268
PspGI	CCWGG	4 cut(s)	1142, 1303, 1668, 1919
PspN4I	GGNNCC	3 cut(s)	1153, 1359, 2119
PspPI	GGNCC	3 cut(s)	464, 647, 2117
PstNI	CAGNNNCTG	1 cut(s)	2152
PsuI	RGATCY	4 cut(s)	148, 287, 1151, 1665
PsyI	GACNNNGTC	1 cut(s)	545
RsaI	GTAC	9 cut(s)	137, 194, 263, 441, 681, 868, 1514, 1951, 2264
RsaNI	GTAC	9 cut(s)	136, 193, 262, 440, 680, 867, 1513, 1950, 2263
RseI	CAYNNNNRTG	3 cut(s)	1446, 1781, 2070
SacII	CCGCGG	1 cut(s)	1408
SalI	GTCGAC	1 cut(s)	348
SaqAI	TTAA	7 cut(s)	105, 294, 498, 969, 1050, 1458, 1578
SatI	GCNGC	6 cut(s)	1078, 1081, 1084, 1182, 1316, 1408
Sau96I	GGNCC	3 cut(s)	464, 647, 2117
ScaI	AGTACT	3 cut(s)	868, 1514, 2264
SchI	GAGTC	3 cut(s)	1270, 2006, 2268
ScrFI	CCNGG	5 cut(s)	1144, 1305, 1670, 1834, 1921
SduI	GDGCHC	5 cut(s)	481, 493, 1075, 1140, 1438
SfaNI	GCATC	5 cut(s)	20, 1450, 1732, 1900, 2096
SfcI	CTRYAG	3 cut(s)	207, 912, 957
Sfr303I	CCGCGG	1 cut(s)	1408
SgrBI	CCGCGG	1 cut(s)	1408
SinI	GGWCC	1 cut(s)	2117
SmiMI	CAYNNNNRTG	3 cut(s)	1446, 1781, 2070
SmlI	CTYRAG	5 cut(s)	1091, 2156, 2180, 2195, 2276
SmoI	CTYRAG	5 cut(s)	1091, 2156, 2180, 2195, 2276
Sse9I	AATT	7 cut(s)	295, 718, 1036, 1686, 1703, 1968, 2049
SseBI	AGGCCT	1 cut(s)	565
SsiI	CCGC	4 cut(s)	1078, 1084, 1405, 1407
SspI	AATATT	3 cut(s)	697, 931, 1552
SspMI	CTAG	4 cut(s)	234, 588, 615, 897
StuI	AGGCCT	1 cut(s)	565
StyD4I	CCNGG	5 cut(s)	1142, 1303, 1668, 1832, 1919
StyI	CCWWGG	6 cut(s)	143, 587, 1156, 1169, 1215, 1255
TaaI	ACNGT	6 cut(s)	547, 635, 1429, 1591, 1915, 1949
TaqI	TCGA	5 cut(s)	349, 1043, 1057, 1296, 1597
TasI	AATT	7 cut(s)	295, 718, 1036, 1686, 1703, 1968, 2049
TatI	WGTACW	4 cut(s)	439, 866, 1512, 2262
TauI	GCSGC	3 cut(s)	1080, 1086, 1410
TfiI	GAWTC	5 cut(s)	241, 422, 659, 847, 892
Tru1I	TTAA	7 cut(s)	105, 294, 498, 969, 1050, 1458, 1578
Tru9I	TTAA	7 cut(s)	105, 294, 498, 969, 1050, 1458, 1578
TscAI	CASTG	7 cut(s)	256, 550, 1252, 1434, 1453, 2011, 2020
TseFI	GTSAC	6 cut(s)	1187, 1342, 1783, 1828, 1998, 2011
TseI	GCWGC	3 cut(s)	1080, 1181, 1315
Tsp45I	GTSAC	6 cut(s)	1187, 1342, 1783, 1828, 1998, 2011
TspGWI	ACGGA	2 cut(s)	9, 382
TspRI	CASTG	7 cut(s)	256, 550, 1252, 1434, 1453, 2011, 2020
Tth111I	GACNNNGTC	1 cut(s)	545
Van91I	CCANNNNNTGG	2 cut(s)	473, 2054
VneI	GTGCAC	2 cut(s)	477, 489
VpaK11BI	GGWCC	1 cut(s)	2117
XagI	CCTNNNNNAGG	1 cut(s)	357
XapI	RAATTY	2 cut(s)	1703, 1968
XceI	RCATGY	2 cut(s)	557, 1335
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1676
XmaJI	CCTAGG	1 cut(s)	587
XmiI	GTMKAC	1 cut(s)	349
XmnI	GAANNNNTTC	2 cut(s)	1208, 1502
XspI	CTAG	4 cut(s)	234, 588, 615, 897
ZrmI	AGTACT	3 cut(s)	868, 1514, 2264

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.