Rh7AG330000

GPI ethanolamine phosphate transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0002335
Physical Location & Seq
Reverse (-)
37884123 .. 37887217
3095 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG330000.1

Sequence Viewer

Length: 1185 bp
ATGCCAGCGGAAATTCCGGATAATAATAATCTAGTAATTTGGAGTGGGGTTATGATTATTTTGATCGGAGCAGCTGGGAGGTTTCTAGATCAGCATATTGATGGAAACAAGTTTTGGCTTACTATCTGTAATAGTGATGCAAAGAAATCCAAGTTCCCCATGCTCTTTCAATTACAGGTTCTTTTGGTTGGATTATCATCTGTGATGGTGTCAATATCAACATCTCATAGAACAGAGAACCAAGAATTGCATGTCTGGCACCAGATTATAAATTGGTCCATTGCCGGTCCCTCGATGGTATTTCCATTATTTTCAGCAAATGGTCTCTTGTCCCGGCTTACATCCATATTTCTTGGCTTTGCGCCCACATTTCTTCTATTATCTATCGGATATGAAGCTGTCTTCTATGGTGCTTTTGCTCTTGTACTCATGGCTTGGATACTATTTGAAAACACTCTTATTTACTCAAGTAAGGTGAAAAGGTTGTCAAGTTCCTTTAACAATATGGAGGACAATGTCATAGTTGATGGTCGATACTTGCAGCTGTCTGACATCAGAATTCCTTTAATATTTATGGTCTTGTTTAATGTTGCCTTCTTCGGAAGTATCGCAAGTTTCAAAATCTCATCAGTCTATCGGTTCATTACTGTCTTCAGTCCTTTTCTTATGGCAGCGTTACTCATCTTCAAGCTATTCATTCCATTTTTGCTTGTCATATGCGTATTCAGTGCAATAACAAAGTTGAACCGACTTCCACGATTGGGATGCTATTTTCTCGTTATATTGTTTTCAGACGTTATGACTATGCATTTCTTCTTCCTGGTCCAGAATACAGGGAGTTGGATGGAAATTGGTAACAGCATCAGCCATTTTGGAATCGTGAGTGCTCAAGTTGTCTTTGTTCTGTTGCTTTTCGCACTCACAAACGTATACACGAAGGATATCTGTATTGGTTCTGTGGAGCGGTCTTCTCGGAAAAGCAAATTAAAGCATGTTAAATTAGGATATTGCGCTCATCAGTTTTCCTTAAAGCTGAGCTTTATGTTCGAAGGCCACCTGTTACAGCTTCTCATTTTTTCTGATAATTGGTCTTGCTTCGCTATCTGCGATATTCAGAGCAAGGGGATTTTCCAAGTGTTCCCCAAAGGTTGTACAAATTCGATGGAAATTTTGGCACACCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00563 ko01100 map00563 map01100
Pfam Domains
Protein Families
Phosphodiest PigN Sulfatase

Protein Analysis

394

Amino Acids

44.49

Weight (kDa)

8.97

Isoelectric Point (pI)

26.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PigN PF04987 2 - 280 5.8e-74 Phosphatidylinositolglycan class N (PIG-N)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 269
AccB1I GGYRCC 1 cut(s) 258
AccBSI CCGCTC 1 cut(s) 964
AccI GTMKAC 1 cut(s) 930
AccIII TCCGGA 1 cut(s) 16
AciI CCGC 2 cut(s) 8, 964
AcsI RAATTY 4 cut(s) 12, 558, 1156, 1167
AcuI CTGAAG 1 cut(s) 637
AfaI GTAC 2 cut(s) 426, 1153
AfiI CCNNNNNNNGG 1 cut(s) 761
AgsI TTSAA 5 cut(s) 170, 449, 619, 688, 745
AjnI CCWGG 1 cut(s) 819
AjuI GAANNNNNNNTTGG 2 cut(s) 97, 129
AluBI AGCT 7 cut(s) 74, 398, 544, 691, 1033, 1038, 1066
AluI AGCT 7 cut(s) 74, 398, 544, 691, 1033, 1038, 1066
Alw21I GWGCWC 1 cut(s) 889
Alw26I GTCTC 1 cut(s) 329
Aor13HI TCCGGA 1 cut(s) 16
AoxI GGCC 1 cut(s) 1051
ApeKI GCWGC 3 cut(s) 71, 541, 671
ApoI RAATTY 4 cut(s) 12, 558, 1156, 1167
AspLEI GCGC 2 cut(s) 364, 1013
AspS9I GGNCC 3 cut(s) 276, 287, 823
AsuC2I CCSGG 1 cut(s) 334
AsuHPI GGTGA 1 cut(s) 487
AsuII TTCGAA 1 cut(s) 1047
AvaII GGWCC 3 cut(s) 276, 287, 823
BanI GGYRCC 1 cut(s) 258
BbsI GAAGAC 3 cut(s) 394, 643, 960
Bbv12I GWGCWC 1 cut(s) 889
BbvI GCAGC 3 cut(s) 83, 553, 683
BccI CCATC 6 cut(s) 95, 199, 289, 521, 838, 1156
BcgI CGANNNNNNTGC 2 cut(s) 747, 781
BciT130I CCWGG 1 cut(s) 821
BciVI GTATCC 1 cut(s) 432
BcnI CCSGG 1 cut(s) 334
BcoDI GTCTC 1 cut(s) 329
BfaI CTAG 2 cut(s) 32, 86
BfuI GTATCC 1 cut(s) 432
BisI GCNGC 3 cut(s) 72, 542, 672
BlpI GCTNAGC 1 cut(s) 1034
BlsI GCNGC 3 cut(s) 73, 543, 673
Bme1390I CCNGG 2 cut(s) 334, 821
Bme18I GGWCC 3 cut(s) 276, 287, 823
BmgT120I GGNCC 3 cut(s) 276, 287, 823
BmiI GGNNCC 2 cut(s) 260, 289
BmrFI CCNGG 2 cut(s) 334, 821
BmsI GCATC 3 cut(s) 127, 755, 870
BpiI GAAGAC 3 cut(s) 394, 643, 960
Bpu1102I GCTNAGC 1 cut(s) 1034
Bpu14I TTCGAA 1 cut(s) 1047
BpuEI CTTGAG 2 cut(s) 451, 873
BpuMI CCSGG 1 cut(s) 334
BsaBI GATNNNNATC 1 cut(s) 196
BsaI GGTCTC 1 cut(s) 329
BsaWI WCCGGW 1 cut(s) 16
Bsc4I CCNNNNNNNGG 1 cut(s) 761
Bse118I RCCGGY 1 cut(s) 284
Bse3DI GCAATG 1 cut(s) 279
Bse8I GATNNNNATC 1 cut(s) 196
BseAI TCCGGA 1 cut(s) 16
BseBI CCWGG 1 cut(s) 821
BseGI GGATG 3 cut(s) 341, 770, 849
BseJI GATNNNNATC 1 cut(s) 196
BseLI CCNNNNNNNGG 1 cut(s) 761
BseMI GCAATG 1 cut(s) 279
BseMII CTCAG 1 cut(s) 1025
BseXI GCAGC 3 cut(s) 83, 553, 683
BseYI CCCAGC 1 cut(s) 74
BshFI GGCC 1 cut(s) 1053
BshNI GGYRCC 1 cut(s) 258
BsiHKAI GWGCWC 1 cut(s) 889
BsiSI CCGG 3 cut(s) 17, 285, 334
BslFI GGGAC 2 cut(s) 273, 316
BslI CCNNNNNNNGG 1 cut(s) 761
BsmAI GTCTC 1 cut(s) 329
BsmFI GGGAC 2 cut(s) 273, 316
BsnI GGCC 1 cut(s) 1053
Bso31I GGTCTC 1 cut(s) 329
Bsp119I TTCGAA 1 cut(s) 1047
Bsp1286I GDGCHC 1 cut(s) 889
Bsp13I TCCGGA 1 cut(s) 16
Bsp1407I TGTACA 1 cut(s) 1151
Bsp143I GATC 2 cut(s) 63, 88
Bsp1720I GCTNAGC 1 cut(s) 1034
BspACI CCGC 2 cut(s) 8, 964
BspANI GGCC 1 cut(s) 1053
BspCNI CTCAG 1 cut(s) 1026
BspEI TCCGGA 1 cut(s) 16
BspLI GGNNCC 2 cut(s) 260, 289
BspT104I TTCGAA 1 cut(s) 1047
BspT107I GGYRCC 1 cut(s) 258
BspTNI GGTCTC 1 cut(s) 329
BsrBI CCGCTC 1 cut(s) 964
BsrDI GCAATG 1 cut(s) 279
BsrFI RCCGGY 1 cut(s) 284
BsrGI TGTACA 1 cut(s) 1151
BssAI RCCGGY 1 cut(s) 284
BssMI GATC 2 cut(s) 63, 88
BssNAI GTATAC 1 cut(s) 931
Bst1107I GTATAC 1 cut(s) 931
Bst2UI CCWGG 1 cut(s) 821
Bst4CI ACNGT 1 cut(s) 649
BstAUI TGTACA 1 cut(s) 1151
BstBI TTCGAA 1 cut(s) 1047
BstC8I GCNNGC 1 cut(s) 6
BstDEI CTNAG 1 cut(s) 1034
BstF5I GGATG 3 cut(s) 341, 770, 849
BstHHI GCGC 2 cut(s) 364, 1013
BstKTI GATC 2 cut(s) 66, 91
BstMAI GTCTC 1 cut(s) 329
BstMBI GATC 2 cut(s) 63, 88
BstMWI GCNNNNNNNGC 1 cut(s) 256
BstNI CCWGG 1 cut(s) 821
BstNSI RCATGY 2 cut(s) 254, 995
BstSCI CCNGG 2 cut(s) 332, 819
BstV1I GCAGC 3 cut(s) 83, 553, 683
BstV2I GAAGAC 3 cut(s) 394, 643, 960
BstZ17I GTATAC 1 cut(s) 931
BsuI GTATCC 1 cut(s) 432
BsuRI GGCC 1 cut(s) 1053
BtsCI GGATG 3 cut(s) 341, 770, 849
BtsIMutI CAGTG 1 cut(s) 733
Cac8I GCNNGC 1 cut(s) 6
CfoI GCGC 2 cut(s) 364, 1013
Cfr10I RCCGGY 1 cut(s) 284
Cfr13I GGNCC 3 cut(s) 276, 287, 823
Csp6I GTAC 2 cut(s) 425, 1152
CviAII CATG 4 cut(s) 160, 251, 430, 992
CviQI GTAC 2 cut(s) 425, 1152
DdeI CTNAG 1 cut(s) 1034
DpnI GATC 2 cut(s) 65, 90
DpnII GATC 2 cut(s) 63, 88
Eco31I GGTCTC 1 cut(s) 329
Eco32I GATATC 1 cut(s) 943
Eco47I GGWCC 3 cut(s) 276, 287, 823
Eco57I CTGAAG 1 cut(s) 637
EcoRI GAATTC 1 cut(s) 558
EcoRII CCWGG 1 cut(s) 819
EcoRV GATATC 1 cut(s) 943
EcoT22I ATGCAT 1 cut(s) 810
FaeI CATG 4 cut(s) 163, 254, 433, 995
FalI AAGNNNNNCTT 2 cut(s) 1022, 1054
FaqI GGGAC 2 cut(s) 273, 316
FatI CATG 4 cut(s) 159, 250, 429, 991
FauNDI CATATG 1 cut(s) 716
FblI GTMKAC 1 cut(s) 930
Fnu4HI GCNGC 3 cut(s) 72, 542, 672
FokI GGATG 3 cut(s) 328, 777, 856
Fsp4HI GCNGC 3 cut(s) 72, 542, 672
FspBI CTAG 2 cut(s) 32, 86
GlaI GCGC 2 cut(s) 363, 1012
GluI GCNGC 3 cut(s) 72, 542, 672
GsaI CCCAGC 1 cut(s) 78
HaeIII GGCC 1 cut(s) 1053
HapII CCGG 3 cut(s) 17, 285, 334
HhaI GCGC 2 cut(s) 364, 1013
Hin1II CATG 4 cut(s) 163, 254, 433, 995
Hin6I GCGC 2 cut(s) 362, 1011
HinP1I GCGC 2 cut(s) 362, 1011
HinfI GANTC 1 cut(s) 876
HpaII CCGG 3 cut(s) 17, 285, 334
HphI GGTGA 1 cut(s) 487
Hpy166II GTNNAC 1 cut(s) 931
Hpy188I TCNGA 9 cut(s) 68, 389, 550, 557, 602, 793, 975, 1081, 1116
Hpy188III TCNNGA 4 cut(s) 17, 86, 826, 880
Hpy8I GTNNAC 1 cut(s) 931
HpyAV CCTTC 3 cut(s) 604, 931, 1043
HpyCH4III ACNGT 1 cut(s) 649
HpyCH4IV ACGT 2 cut(s) 795, 927
HpyCH4V TGCA 5 cut(s) 140, 250, 541, 731, 808
HpyF10VI GCNNNNNNNGC 1 cut(s) 256
HpyF3I CTNAG 1 cut(s) 1034
HpySE526I ACGT 2 cut(s) 795, 927
Hsp92II CATG 4 cut(s) 163, 254, 433, 995
HspAI GCGC 2 cut(s) 362, 1011
Kpn2I TCCGGA 1 cut(s) 16
Kzo9I GATC 2 cut(s) 63, 88
LmnI GCTCC 2 cut(s) 68, 961
Lsp1109I GCAGC 3 cut(s) 83, 553, 683
LweI GCATC 3 cut(s) 127, 755, 870
MaeI CTAG 2 cut(s) 32, 86
MaeII ACGT 2 cut(s) 795, 927
MaeIII GTNAC 3 cut(s) 675, 854, 1059
MalI GATC 2 cut(s) 65, 90
MbiI CCGCTC 1 cut(s) 964
MboI GATC 2 cut(s) 63, 88
MboII GAAGA 8 cut(s) 365, 394, 589, 643, 676, 805, 808, 960
MhlI GDGCHC 1 cut(s) 889
MmeI TCCRAC 2 cut(s) 169, 821
MnlI CCTC 3 cut(s) 72, 301, 502
Mph1103I ATGCAT 1 cut(s) 810
MroI TCCGGA 1 cut(s) 16
MseI TTAA 7 cut(s) 498, 566, 585, 986, 996, 1028, 1183
MslI CAYNNNNRTG 1 cut(s) 99
MspA1I CMGCKG 3 cut(s) 8, 74, 544
MspI CCGG 3 cut(s) 17, 285, 334
MspR9I CCNGG 2 cut(s) 334, 821
MvaI CCWGG 1 cut(s) 821
MwoI GCNNNNNNNGC 1 cut(s) 256
NciI CCSGG 1 cut(s) 334
NdeI CATATG 1 cut(s) 716
NdeII GATC 2 cut(s) 63, 88
NlaIII CATG 4 cut(s) 163, 254, 433, 995
NlaIV GGNNCC 2 cut(s) 260, 289
NsiI ATGCAT 1 cut(s) 810
NspI RCATGY 2 cut(s) 254, 995
NspV TTCGAA 1 cut(s) 1047
PcsI WCGNNNNNNNCGW 1 cut(s) 1104
PfeI GAWTC 1 cut(s) 876
PflFI GACNNNGTC 1 cut(s) 515
PkrI GCNGC 3 cut(s) 73, 543, 673
PsiI TTATAA 1 cut(s) 269
Psp6I CCWGG 1 cut(s) 819
PspFI CCCAGC 1 cut(s) 74
PspGI CCWGG 1 cut(s) 819
PspN4I GGNNCC 2 cut(s) 260, 289
PspPI GGNCC 3 cut(s) 276, 287, 823
PsyI GACNNNGTC 1 cut(s) 515
PvuII CAGCTG 2 cut(s) 74, 544
RsaI GTAC 2 cut(s) 426, 1153
RsaNI GTAC 2 cut(s) 425, 1152
RseI CAYNNNNRTG 1 cut(s) 99
SaqAI TTAA 7 cut(s) 498, 566, 585, 986, 996, 1028, 1183
SatI GCNGC 3 cut(s) 72, 542, 672
Sau3AI GATC 2 cut(s) 63, 88
Sau96I GGNCC 3 cut(s) 276, 287, 823
ScrFI CCNGG 2 cut(s) 334, 821
SduI GDGCHC 1 cut(s) 889
SfaNI GCATC 3 cut(s) 127, 755, 870
SfuI TTCGAA 1 cut(s) 1047
SinI GGWCC 3 cut(s) 276, 287, 823
SmiMI CAYNNNNRTG 1 cut(s) 99
SmlI CTYRAG 2 cut(s) 466, 888
SmoI CTYRAG 2 cut(s) 466, 888
SsiI CCGC 2 cut(s) 8, 964
SspI AATATT 1 cut(s) 570
SspMI CTAG 2 cut(s) 32, 86
StyD4I CCNGG 2 cut(s) 332, 819
TaaI ACNGT 1 cut(s) 649
TaiI ACGT 2 cut(s) 798, 930
TaqI TCGA 4 cut(s) 293, 532, 1047, 1160
TatI WGTACW 2 cut(s) 424, 1151
TfiI GAWTC 1 cut(s) 876
Tru1I TTAA 7 cut(s) 498, 566, 585, 986, 996, 1028, 1183
Tru9I TTAA 7 cut(s) 498, 566, 585, 986, 996, 1028, 1183
TscAI CASTG 1 cut(s) 733
TseI GCWGC 3 cut(s) 71, 541, 671
TspDTI ATGAA 3 cut(s) 408, 631, 685
TspRI CASTG 1 cut(s) 733
Tth111I GACNNNGTC 1 cut(s) 515
VpaK11BI GGWCC 3 cut(s) 276, 287, 823
XapI RAATTY 4 cut(s) 12, 558, 1156, 1167
XbaI TCTAGA 1 cut(s) 85
XceI RCATGY 2 cut(s) 254, 995
XmiI GTMKAC 1 cut(s) 930
XspI CTAG 2 cut(s) 32, 86
Zsp2I ATGCAT 1 cut(s) 810
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.