Rh7BG319700

GPI ethanolamine phosphate transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0002335
Physical Location & Seq
Reverse (-)
31138401 .. 31141756
3356 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG319700.1

Sequence Viewer

Length: 768 bp
ATGCTCTTTCAATTACAGGCTCTTTTGGTTGGATTATCATCTGTGATGGTGTCAATATCAACATCTCATAGAACAGAGAACCAAGAATTGCATGTCTGGCACCAGATTATAAATTGGTCCATTGCCGGTCCCTCGATGGTACTTCCATTATTTTCAGCAAATGGTCTCTTGTCCCGGCTTACGTCCATATTTCTTGGCTTTGCGCCCACATTTCTTCTATTATCTATCGGATATGAAGCTGTCGTCTATGGTGCTTTTGCTCTTGTACTCATGGCTTGGATACTATTTGAAAACACTCTTATTTACTCAAGTAAGCTGTCTGACATCAGAATTCCTTTAATATTTATGGTCTTGTTTAATGTTGCCTTCTTCGGAACGGGAAATTTTGCAAGTATCGCAAGTTTCGAAATCTCATCAGTCTATCGGTTCATTACTGTCTTCAGCCCTTTTCTTTTGGCAGCGTTACTCATCTTCAAGCTATTCATTCCATTTCTGCTTGTCATATGCGTATTCAGTGCAATAACAAAGCTGAACCGATTTCCACGATTGGGATGCTATTTTCTCGTTATATCGTTTTCAGACGTTATGACTATGCATTTCTTCTTCCTGAATACAGGAAGTTGGATGGAAATTGGTAACAGCATCAGCCATTTTGGAATCATGAGTGCTCAAGTTGTCTTTGTTCTGTTGCTTTTCGCACTCACAAACATATACACGAAGGATATCTGTATTGGTTCTGTGGAGCGGTCTTCTCGGAAAGCAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00563 ko01100 map00563 map01100
Pfam Domains
Protein Families
Phosphodiest PigN Sulfatase

Protein Analysis

255

Amino Acids

28.59

Weight (kDa)

8.86

Isoelectric Point (pI)

24.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PigN PF04987 2 - 206 3.7e-63 Phosphatidylinositolglycan class N (PIG-N)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 110
AccB1I GGYRCC 1 cut(s) 99
AccBSI CCGCTC 1 cut(s) 745
AciI CCGC 1 cut(s) 745
AcsI RAATTY 2 cut(s) 330, 382
AcuI CTGAAG 1 cut(s) 424
AfaI GTAC 2 cut(s) 141, 267
AfiI CCNNNNNNNGG 1 cut(s) 548
AgsI TTSAA 3 cut(s) 11, 290, 475
AluBI AGCT 4 cut(s) 239, 316, 478, 529
AluI AGCT 4 cut(s) 239, 316, 478, 529
Alw21I GWGCWC 1 cut(s) 670
Alw26I GTCTC 1 cut(s) 170
ApeKI GCWGC 1 cut(s) 458
ApoI RAATTY 2 cut(s) 330, 382
AspLEI GCGC 1 cut(s) 205
AspS9I GGNCC 2 cut(s) 117, 128
AsuC2I CCSGG 1 cut(s) 175
AsuII TTCGAA 1 cut(s) 405
AvaII GGWCC 2 cut(s) 117, 128
BanI GGYRCC 1 cut(s) 99
BbsI GAAGAC 2 cut(s) 430, 741
Bbv12I GWGCWC 1 cut(s) 670
BbvI GCAGC 1 cut(s) 470
BccI CCATC 3 cut(s) 40, 130, 619
BcgI CGANNNNNNTGC 2 cut(s) 534, 568
BciVI GTATCC 1 cut(s) 273
BcnI CCSGG 1 cut(s) 175
BcoDI GTCTC 1 cut(s) 170
BfuI GTATCC 1 cut(s) 273
BisI GCNGC 1 cut(s) 459
BlsI GCNGC 1 cut(s) 460
Bme1390I CCNGG 1 cut(s) 175
Bme18I GGWCC 2 cut(s) 117, 128
BmgT120I GGNCC 2 cut(s) 117, 128
BmiI GGNNCC 2 cut(s) 101, 130
BmrFI CCNGG 1 cut(s) 175
BmsI GCATC 2 cut(s) 542, 651
BpiI GAAGAC 2 cut(s) 430, 741
Bpu14I TTCGAA 1 cut(s) 405
BpuEI CTTGAG 2 cut(s) 292, 654
BpuMI CCSGG 1 cut(s) 175
BsaBI GATNNNNATC 1 cut(s) 37
BsaI GGTCTC 1 cut(s) 170
Bsc4I CCNNNNNNNGG 1 cut(s) 548
Bse118I RCCGGY 1 cut(s) 125
Bse3DI GCAATG 1 cut(s) 120
Bse8I GATNNNNATC 1 cut(s) 37
BseGI GGATG 2 cut(s) 557, 630
BseJI GATNNNNATC 1 cut(s) 37
BseLI CCNNNNNNNGG 1 cut(s) 548
BseMI GCAATG 1 cut(s) 120
BseXI GCAGC 1 cut(s) 470
BshNI GGYRCC 1 cut(s) 99
BsiHKAI GWGCWC 1 cut(s) 670
BsiSI CCGG 2 cut(s) 126, 175
BslFI GGGAC 2 cut(s) 114, 157
BslI CCNNNNNNNGG 1 cut(s) 548
BsmAI GTCTC 1 cut(s) 170
BsmFI GGGAC 2 cut(s) 114, 157
Bso31I GGTCTC 1 cut(s) 170
Bsp119I TTCGAA 1 cut(s) 405
Bsp1286I GDGCHC 1 cut(s) 670
BspACI CCGC 1 cut(s) 745
BspHI TCATGA 1 cut(s) 660
BspLI GGNNCC 2 cut(s) 101, 130
BspT104I TTCGAA 1 cut(s) 405
BspT107I GGYRCC 1 cut(s) 99
BspTNI GGTCTC 1 cut(s) 170
BsrBI CCGCTC 1 cut(s) 745
BsrDI GCAATG 1 cut(s) 120
BsrFI RCCGGY 1 cut(s) 125
BssAI RCCGGY 1 cut(s) 125
Bst4CI ACNGT 1 cut(s) 436
BstBI TTCGAA 1 cut(s) 405
BstF5I GGATG 2 cut(s) 557, 630
BstHHI GCGC 1 cut(s) 205
BstMAI GTCTC 1 cut(s) 170
BstMWI GCNNNNNNNGC 2 cut(s) 97, 395
BstNSI RCATGY 1 cut(s) 95
BstSCI CCNGG 1 cut(s) 173
BstV1I GCAGC 1 cut(s) 470
BstV2I GAAGAC 2 cut(s) 430, 741
BsuI GTATCC 1 cut(s) 273
BtsCI GGATG 2 cut(s) 557, 630
BtsIMutI CAGTG 1 cut(s) 520
CciI TCATGA 1 cut(s) 660
CfoI GCGC 1 cut(s) 205
Cfr10I RCCGGY 1 cut(s) 125
Cfr13I GGNCC 2 cut(s) 117, 128
Csp6I GTAC 2 cut(s) 140, 266
CviAII CATG 3 cut(s) 92, 271, 661
CviQI GTAC 2 cut(s) 140, 266
Eco31I GGTCTC 1 cut(s) 170
Eco32I GATATC 1 cut(s) 724
Eco47I GGWCC 2 cut(s) 117, 128
Eco57I CTGAAG 1 cut(s) 424
EcoRI GAATTC 1 cut(s) 330
EcoRV GATATC 1 cut(s) 724
EcoT22I ATGCAT 1 cut(s) 597
FaeI CATG 3 cut(s) 95, 274, 664
FaqI GGGAC 2 cut(s) 114, 157
FatI CATG 3 cut(s) 91, 270, 660
FauNDI CATATG 1 cut(s) 503
Fnu4HI GCNGC 1 cut(s) 459
FokI GGATG 2 cut(s) 564, 637
Fsp4HI GCNGC 1 cut(s) 459
GlaI GCGC 1 cut(s) 204
GluI GCNGC 1 cut(s) 459
HapII CCGG 2 cut(s) 126, 175
HhaI GCGC 1 cut(s) 205
Hin1II CATG 3 cut(s) 95, 274, 664
Hin6I GCGC 1 cut(s) 203
HinP1I GCGC 1 cut(s) 203
HinfI GANTC 1 cut(s) 657
HpaII CCGG 2 cut(s) 126, 175
Hpy188I TCNGA 6 cut(s) 230, 322, 329, 374, 580, 756
Hpy188III TCNNGA 2 cut(s) 607, 661
HpyAV CCTTC 2 cut(s) 376, 712
HpyCH4III ACNGT 1 cut(s) 436
HpyCH4IV ACGT 2 cut(s) 182, 582
HpyCH4V TGCA 4 cut(s) 91, 389, 518, 595
HpyF10VI GCNNNNNNNGC 2 cut(s) 97, 395
HpySE526I ACGT 2 cut(s) 182, 582
Hsp92II CATG 3 cut(s) 95, 274, 664
HspAI GCGC 1 cut(s) 203
LmnI GCTCC 1 cut(s) 742
LpnPI CCDG 7 cut(s) 2, 82, 116, 139, 188, 600, 620
Lsp1109I GCAGC 1 cut(s) 470
LweI GCATC 2 cut(s) 542, 651
MaeII ACGT 2 cut(s) 182, 582
MaeIII GTNAC 2 cut(s) 462, 635
MbiI CCGCTC 1 cut(s) 745
MboII GAAGA 7 cut(s) 206, 361, 430, 463, 592, 595, 741
MhlI GDGCHC 1 cut(s) 670
MluCI AATT 7 cut(s) 11, 86, 112, 330, 382, 630, 762
MmeI TCCRAC 2 cut(s) 10, 602
MnlI CCTC 1 cut(s) 142
Mph1103I ATGCAT 1 cut(s) 597
MseI TTAA 3 cut(s) 338, 357, 766
MspI CCGG 2 cut(s) 126, 175
MspR9I CCNGG 1 cut(s) 175
MwoI GCNNNNNNNGC 2 cut(s) 97, 395
NciI CCSGG 1 cut(s) 175
NdeI CATATG 1 cut(s) 503
NlaIII CATG 3 cut(s) 95, 274, 664
NlaIV GGNNCC 2 cut(s) 101, 130
NsiI ATGCAT 1 cut(s) 597
NspI RCATGY 1 cut(s) 95
NspV TTCGAA 1 cut(s) 405
PagI TCATGA 1 cut(s) 660
PcsI WCGNNNNNNNCGW 1 cut(s) 402
PfeI GAWTC 1 cut(s) 657
PkrI GCNGC 1 cut(s) 460
PsiI TTATAA 1 cut(s) 110
PspN4I GGNNCC 2 cut(s) 101, 130
PspPI GGNCC 2 cut(s) 117, 128
RsaI GTAC 2 cut(s) 141, 267
RsaNI GTAC 2 cut(s) 140, 266
SaqAI TTAA 3 cut(s) 338, 357, 766
SatI GCNGC 1 cut(s) 459
Sau96I GGNCC 2 cut(s) 117, 128
ScrFI CCNGG 1 cut(s) 175
SduI GDGCHC 1 cut(s) 670
SetI ASST 6 cut(s) 185, 241, 318, 480, 531, 585
SfaNI GCATC 2 cut(s) 542, 651
SfuI TTCGAA 1 cut(s) 405
SinI GGWCC 2 cut(s) 117, 128
SmlI CTYRAG 2 cut(s) 307, 669
SmoI CTYRAG 2 cut(s) 307, 669
Sse9I AATT 7 cut(s) 11, 86, 112, 330, 382, 630, 762
SsiI CCGC 1 cut(s) 745
SspI AATATT 1 cut(s) 342
StyD4I CCNGG 1 cut(s) 173
TaaI ACNGT 1 cut(s) 436
TaiI ACGT 2 cut(s) 185, 585
TaqI TCGA 2 cut(s) 134, 405
TasI AATT 7 cut(s) 11, 86, 112, 330, 382, 630, 762
TatI WGTACW 1 cut(s) 265
TfiI GAWTC 1 cut(s) 657
Tru1I TTAA 3 cut(s) 338, 357, 766
Tru9I TTAA 3 cut(s) 338, 357, 766
TscAI CASTG 1 cut(s) 520
TseI GCWGC 1 cut(s) 458
TspDTI ATGAA 3 cut(s) 249, 418, 472
TspRI CASTG 1 cut(s) 520
VpaK11BI GGWCC 2 cut(s) 117, 128
XapI RAATTY 2 cut(s) 330, 382
XceI RCATGY 1 cut(s) 95
Zsp2I ATGCAT 1 cut(s) 597
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.