Rh7AG330100

GPI ethanolamine phosphate transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0002335
Physical Location & Seq
Reverse (-)
37887224 .. 37893683
6460 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG330100.1

Sequence Viewer

Length: 1446 bp
ATGCTCGGCCGCCGACTCAGTCGAGGCCGGGACACGTGGCGATTATTGCTGGCTTCTATGAGGATCCGAGTGCTGTTACGAAAGGGTGGAAAGCTAATCCTGTTGAATTTGATTCGTTATCCTCATGATTTTGAAGACTTTGCTACTGATACCTCCTTTCTGGATGAGTGGTCGTTTGATCAATTTCAGAGCCTAATGAATAGGTCCAAAGAGGACCCAAAGTTGAAGGAGTTACTTTTACAGGATAATCTTGTTGTGTTTTTGCACCTACTTGGTTGTGATTCAAATGGTCATGCACATCGGCCCTTTTCCTCCATCTGTCTCAATAATGTTGCGGTTGTTGACAGTATAGCTGAAAGGGTTTATAATCTTCTTGAAGATTACTACAAGGACAATTGTACAGCATACGTATTTACTGGTGATCATGGAATGCATGATAAAGGCCACGGAGATGGACATCCTTCAAACACCGATACTCCCCTTGTTGTTTGGGGAGCAGGTGTTAAACACCCAAAGCCTATTTCCAGCAGCAGCCATGGAGATGGACATTCTGATTGTGGTACTTGTTTTGTTGATGACCATATGCATGACATGCCAATGCCTAAAGAATGGGGCCTTCATGGCATTGAAAGGGTGGATGTCAATCAAGCTGATATCGCACCTCTCATGGCTTCAACACTTCTTGGATTGCCATGTCCTGTACACTCGGTGGGGAGTTTACCCCTTGATTACATAGACATGAAAAAGACAGATGAAGTTGAAGCTGTTCTAGCCAATACAAAGCACGTTCTCAATCAATTTGTTTGGAAATCACAAACCAAGGAGGCAACTTCATTATATTTTAAGCCTTTCAAACCGTTGGGCCATTATTCAACCCTCTTGGATCAGATTGAGGATCATATATCTAATGGAGACTATGAAGCTTCAAGGAAACCATCTGAAAATCTCCGAGACTTGGCACTGCAAGGACTTCATTATTTTCAAACTTATGATTGGCTGATGCTCATGACTGTAATTATTCTTGGGTATATTGGTTGGATGACCTATATTGTTCTCCATGTGTTGCAATCTTACATGTCATTGGCAGGGGATATATTGACAAAGGAGCATGCAGATCACTGGACAGATTATACCAGAAAGGTACAACTTTGTGGATGCTTGTTTCTGGGACTACTTAGCATCATACTGTTCATGGAGCAGTCTCCTCCTCTTTACCATGCATACACAACAATGACAGTATTTTTGTGGACACAAATATCTAGTGAATATCGGTTCATAAAAGCATTATGGAAACAGTTACATGGAAGAGAAATAAATTATTTCACAAAAGTTGGAGCCGCCTGTGCTGTCTCAGTATTCATACTTGAATATCTGGTGAATAGCTTCACCGAGAGGGAGCTCTACACATGGTGTTTTCTGACTGTGGGGGTTCTTATCAGTATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00563 ko01100 map00563 map01100
Pfam Domains
Protein Families
Phosphodiest PigN Sulfatase

Protein Analysis

481

Amino Acids

54.94

Weight (kDa)

5.97

Isoelectric Point (pI)

35.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PigN PF04987 322 - 477 2.9e-33 Phosphatidylinositolglycan class N (PIG-N)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 366
AarI CACCTGC 1 cut(s) 488
Acc36I ACCTGC 1 cut(s) 488
AciI CCGC 3 cut(s) 10, 335, 1338
AclWI GGATC 4 cut(s) 58, 71, 891, 903
AcoI YGGCCR 1 cut(s) 7
AcsI RAATTY 1 cut(s) 106
AcvI CACGTG 1 cut(s) 36
AdeI CACNNNGTG 2 cut(s) 709, 1410
AfaI GTAC 4 cut(s) 400, 562, 702, 1143
AfiI CCNNNNNNNGG 1 cut(s) 955
AflIII ACRYGT 2 cut(s) 33, 1074
AjuI GAANNNNNNNTTGG 2 cut(s) 505, 537
AluBI AGCT 7 cut(s) 94, 353, 650, 764, 923, 1383, 1399
AluI AGCT 7 cut(s) 94, 353, 650, 764, 923, 1383, 1399
Alw21I GWGCWC 1 cut(s) 1401
Alw26I GTCTC 5 cut(s) 326, 906, 945, 1206, 1354
AlwI GGATC 4 cut(s) 58, 71, 891, 903
AlwNI CAGNNNCTG 1 cut(s) 1443
AoxI GGCC 6 cut(s) 7, 25, 302, 442, 613, 862
ApeKI GCWGC 2 cut(s) 528, 531
ApoI RAATTY 1 cut(s) 106
ArsI GACNNNNNNTTYG 2 cut(s) 1225, 1257
Asp700I GAANNNNTTC 2 cut(s) 765, 1382
AspS9I GGNCC 5 cut(s) 204, 214, 303, 613, 862
AsuC2I CCSGG 1 cut(s) 29
AsuHPI GGTGA 3 cut(s) 431, 1378, 1387
AvaII GGWCC 2 cut(s) 204, 214
BamHI GGATCC 1 cut(s) 63
BanII GRGCYC 1 cut(s) 1401
BbrPI CACGTG 1 cut(s) 36
BbsI GAAGAC 1 cut(s) 141
Bbv12I GWGCWC 1 cut(s) 1401
BbvI GCAGC 2 cut(s) 540, 543
BccI CCATC 4 cut(s) 323, 446, 536, 943
BclI TGATCA 2 cut(s) 178, 421
BcnI CCSGG 1 cut(s) 29
BcoDI GTCTC 5 cut(s) 326, 906, 945, 1206, 1354
BfaI CTAG 2 cut(s) 770, 1260
BfuAI ACCTGC 1 cut(s) 488
BglI GCCNNNNNGGC 1 cut(s) 621
BisI GCNGC 4 cut(s) 10, 529, 532, 1338
BlsI GCNGC 4 cut(s) 11, 530, 533, 1339
Bme1390I CCNGG 1 cut(s) 29
Bme18I GGWCC 2 cut(s) 204, 214
BmgT120I GGNCC 5 cut(s) 204, 214, 303, 613, 862
BmiI GGNNCC 4 cut(s) 65, 216, 614, 1336
BmrFI CCNGG 1 cut(s) 29
BmsI GCATC 3 cut(s) 990, 1145, 1188
BpiI GAAGAC 1 cut(s) 141
BpuMI CCSGG 1 cut(s) 29
BsaAI YACGTR 2 cut(s) 36, 409
BsaBI GATNNNNATC 2 cut(s) 456, 642
BsaJI CCNNGG 3 cut(s) 445, 535, 819
BsaXI ACNNNNNCTCC 4 cut(s) 460, 486, 490, 516
Bsc4I CCNNNNNNNGG 1 cut(s) 955
Bse1I ACTGG 2 cut(s) 421, 1124
Bse8I GATNNNNATC 2 cut(s) 456, 642
BseDI CCNNGG 3 cut(s) 445, 535, 819
BseGI GGATG 5 cut(s) 169, 457, 643, 1044, 1160
BseJI GATNNNNATC 2 cut(s) 456, 642
BseLI CCNNNNNNNGG 1 cut(s) 955
BseMII CTCAG 2 cut(s) 31, 1365
BseNI ACTGG 2 cut(s) 421, 1124
BseRI GAGGAG 2 cut(s) 1194, 1197
BseX3I CGGCCG 1 cut(s) 7
BseXI GCAGC 2 cut(s) 540, 543
Bsh1285I CGRYCG 1 cut(s) 10
BshFI GGCC 6 cut(s) 9, 27, 304, 444, 615, 864
BsiEI CGRYCG 1 cut(s) 10
BsiHKAI GWGCWC 1 cut(s) 1401
BsiSI CCGG 1 cut(s) 28
BslFI GGGAC 2 cut(s) 44, 1182
BslI CCNNNNNNNGG 1 cut(s) 955
BsmAI GTCTC 5 cut(s) 326, 906, 945, 1206, 1354
BsmFI GGGAC 2 cut(s) 44, 1182
BsmI GAATGC 1 cut(s) 435
BsnI GGCC 6 cut(s) 9, 27, 304, 444, 615, 864
Bsp1286I GDGCHC 1 cut(s) 1401
Bsp1407I TGTACA 2 cut(s) 398, 700
Bsp143I GATC 6 cut(s) 63, 178, 421, 883, 895, 1114
Bsp19I CCATGG 1 cut(s) 535
BspACI CCGC 3 cut(s) 10, 335, 1338
BspANI GGCC 6 cut(s) 9, 27, 304, 444, 615, 864
BspCNI CTCAG 2 cut(s) 30, 1364
BspHI TCATGA 2 cut(s) 124, 1005
BspLI GGNNCC 4 cut(s) 65, 216, 614, 1336
BspMI ACCTGC 1 cut(s) 488
BspPI GGATC 4 cut(s) 58, 71, 891, 903
BsrGI TGTACA 2 cut(s) 398, 700
BsrI ACTGG 2 cut(s) 421, 1124
BssECI CCNNGG 3 cut(s) 445, 535, 819
BssMI GATC 6 cut(s) 63, 178, 421, 883, 895, 1114
BssT1I CCWWGG 2 cut(s) 535, 819
Bst4CI ACNGT 7 cut(s) 347, 858, 1012, 1188, 1237, 1296, 1423
Bst6I CTCTTC 1 cut(s) 1300
BstAPI GCANNNNNTGC 1 cut(s) 592
BstAUI TGTACA 2 cut(s) 398, 700
BstBAI YACGTR 2 cut(s) 36, 409
BstC8I GCNNGC 2 cut(s) 51, 1110
BstDEI CTNAG 3 cut(s) 17, 1175, 1351
BstDSI CCRYGG 2 cut(s) 445, 535
BstF5I GGATG 5 cut(s) 169, 457, 643, 1044, 1160
BstKTI GATC 6 cut(s) 66, 181, 424, 886, 898, 1117
BstMAI GTCTC 5 cut(s) 326, 906, 945, 1206, 1354
BstMBI GATC 6 cut(s) 63, 178, 421, 883, 895, 1114
BstMCI CGRYCG 1 cut(s) 10
BstMWI GCNNNNNNNGC 6 cut(s) 46, 592, 621, 656, 770, 1343
BstNSI RCATGY 3 cut(s) 595, 1078, 1112
BstSCI CCNGG 1 cut(s) 27
BstSNI TACGTA 1 cut(s) 409
BstV1I GCAGC 2 cut(s) 540, 543
BstV2I GAAGAC 1 cut(s) 141
BstX2I RGATCY 1 cut(s) 63
BstXI CCANNNNNNTGG 2 cut(s) 452, 542
BstYI RGATCY 1 cut(s) 63
BstZI CGGCCG 1 cut(s) 7
BsuRI GGCC 6 cut(s) 9, 27, 304, 444, 615, 864
BtgI CCRYGG 2 cut(s) 445, 535
BtsCI GGATG 5 cut(s) 169, 457, 643, 1044, 1160
BtsI GCAGTG 1 cut(s) 959
BtsIMutI CAGTG 2 cut(s) 959, 1117
BveI ACCTGC 1 cut(s) 488
Cac8I GCNNGC 2 cut(s) 51, 1110
CaiI CAGNNNCTG 1 cut(s) 1443
CciI TCATGA 2 cut(s) 124, 1005
Cfr13I GGNCC 5 cut(s) 204, 214, 303, 613, 862
Csp6I GTAC 4 cut(s) 399, 561, 701, 1142
CviQI GTAC 4 cut(s) 399, 561, 701, 1142
DdeI CTNAG 3 cut(s) 17, 1175, 1351
DpnI GATC 6 cut(s) 65, 180, 423, 885, 897, 1116
DpnII GATC 6 cut(s) 63, 178, 421, 883, 895, 1114
DraIII CACNNNGTG 2 cut(s) 709, 1410
EaeI YGGCCR 1 cut(s) 7
EagI CGGCCG 1 cut(s) 7
Eam1104I CTCTTC 1 cut(s) 1300
EarI CTCTTC 1 cut(s) 1300
Ecl136II GAGCTC 1 cut(s) 1399
EclXI CGGCCG 1 cut(s) 7
Eco105I TACGTA 1 cut(s) 409
Eco130I CCWWGG 2 cut(s) 535, 819
Eco24I GRGCYC 1 cut(s) 1401
Eco32I GATATC 1 cut(s) 655
Eco47I GGWCC 2 cut(s) 204, 214
Eco52I CGGCCG 1 cut(s) 7
Eco53kI GAGCTC 1 cut(s) 1399
Eco72I CACGTG 1 cut(s) 36
EcoICRI GAGCTC 1 cut(s) 1399
EcoO109I RGGNCCY 2 cut(s) 214, 613
EcoRV GATATC 1 cut(s) 655
EcoT14I CCWWGG 2 cut(s) 535, 819
EcoT22I ATGCAT 3 cut(s) 435, 588, 1222
EcoT38I GRGCYC 1 cut(s) 1401
ErhI CCWWGG 2 cut(s) 535, 819
FaqI GGGAC 2 cut(s) 44, 1182
FauNDI CATATG 1 cut(s) 582
FbaI TGATCA 2 cut(s) 178, 421
Fnu4HI GCNGC 4 cut(s) 10, 529, 532, 1338
FokI GGATG 5 cut(s) 176, 444, 650, 1051, 1167
FriOI GRGCYC 1 cut(s) 1401
Fsp4HI GCNGC 4 cut(s) 10, 529, 532, 1338
FspBI CTAG 2 cut(s) 770, 1260
GluI GCNGC 4 cut(s) 10, 529, 532, 1338
HaeIII GGCC 6 cut(s) 9, 27, 304, 444, 615, 864
HapII CCGG 1 cut(s) 28
HincII GTYRAC 1 cut(s) 343
HindII GTYRAC 1 cut(s) 343
HindIII AAGCTT 1 cut(s) 921
HinfI GANTC 3 cut(s) 15, 112, 281
HpaII CCGG 1 cut(s) 28
HphI GGTGA 3 cut(s) 431, 1378, 1387
Hpy166II GTNNAC 4 cut(s) 343, 703, 719, 1248
Hpy188I TCNGA 8 cut(s) 68, 189, 553, 888, 940, 950, 1419, 1445
Hpy188III TCNNGA 4 cut(s) 125, 161, 374, 1006
Hpy8I GTNNAC 4 cut(s) 343, 703, 719, 1248
HpyAV CCTTC 3 cut(s) 220, 471, 626
HpyCH4III ACNGT 7 cut(s) 347, 858, 1012, 1188, 1237, 1296, 1423
HpyCH4IV ACGT 3 cut(s) 35, 408, 786
HpyCH4V TGCA 8 cut(s) 265, 296, 433, 586, 964, 1066, 1112, 1220
HpyF10VI GCNNNNNNNGC 6 cut(s) 46, 592, 621, 656, 770, 1343
HpyF3I CTNAG 3 cut(s) 17, 1175, 1351
HpySE526I ACGT 3 cut(s) 35, 408, 786
Ksp22I TGATCA 2 cut(s) 178, 421
Kzo9I GATC 6 cut(s) 63, 178, 421, 883, 895, 1114
LmnI GCTCC 5 cut(s) 494, 1105, 1195, 1334, 1396
Lsp1109I GCAGC 2 cut(s) 540, 543
LweI GCATC 3 cut(s) 990, 1145, 1188
MaeI CTAG 2 cut(s) 770, 1260
MaeII ACGT 3 cut(s) 35, 408, 786
MaeIII GTNAC 3 cut(s) 75, 231, 1296
MalI GATC 6 cut(s) 65, 180, 423, 885, 897, 1116
MboI GATC 6 cut(s) 63, 178, 421, 883, 895, 1114
MboII GAAGA 4 cut(s) 146, 362, 389, 1317
MfeI CAATTG 1 cut(s) 394
MflI RGATCY 1 cut(s) 63
MhlI GDGCHC 1 cut(s) 1401
MluCI AATT 6 cut(s) 106, 182, 394, 797, 1014, 1315
MlyI GAGTC 1 cut(s) 9
MmeI TCCRAC 2 cut(s) 1016, 1312
Mph1103I ATGCAT 3 cut(s) 435, 588, 1222
MroXI GAANNNNTTC 2 cut(s) 765, 1382
MseI TTAA 2 cut(s) 504, 843
MslI CAYNNNNRTG 6 cut(s) 450, 540, 585, 596, 737, 1229
MspI CCGG 1 cut(s) 28
MspR9I CCNGG 1 cut(s) 29
MunI CAATTG 1 cut(s) 394
Mva1269I GAATGC 1 cut(s) 435
MwoI GCNNNNNNNGC 6 cut(s) 46, 592, 621, 656, 770, 1343
NciI CCSGG 1 cut(s) 29
NcoI CCATGG 1 cut(s) 535
NdeI CATATG 1 cut(s) 582
NdeII GATC 6 cut(s) 63, 178, 421, 883, 895, 1114
NlaIV GGNNCC 4 cut(s) 65, 216, 614, 1336
NsiI ATGCAT 3 cut(s) 435, 588, 1222
NspI RCATGY 3 cut(s) 595, 1078, 1112
PaeI GCATGC 1 cut(s) 1112
PagI TCATGA 2 cut(s) 124, 1005
PaqCI CACCTGC 1 cut(s) 488
PciI ACATGT 1 cut(s) 1074
PctI GAATGC 1 cut(s) 435
PdmI GAANNNNTTC 2 cut(s) 765, 1382
PfeI GAWTC 2 cut(s) 112, 281
PflFI GACNNNGTC 1 cut(s) 18
PkrI GCNGC 4 cut(s) 11, 530, 533, 1339
PleI GAGTC 1 cut(s) 9
PmaCI CACGTG 1 cut(s) 36
PmlI CACGTG 1 cut(s) 36
PpsI GAGTC 1 cut(s) 9
Ppu21I YACGTR 2 cut(s) 36, 409
PpuMI RGGWCCY 1 cut(s) 214
PscI ACATGT 1 cut(s) 1074
PsiI TTATAA 1 cut(s) 366
Psp124BI GAGCTC 1 cut(s) 1401
Psp5II RGGWCCY 1 cut(s) 214
PspCI CACGTG 1 cut(s) 36
PspN4I GGNNCC 4 cut(s) 65, 216, 614, 1336
PspPI GGNCC 5 cut(s) 204, 214, 303, 613, 862
PspPPI RGGWCCY 1 cut(s) 214
PstNI CAGNNNCTG 1 cut(s) 1443
PsuI RGATCY 1 cut(s) 63
PsyI GACNNNGTC 1 cut(s) 18
RsaI GTAC 4 cut(s) 400, 562, 702, 1143
RsaNI GTAC 4 cut(s) 399, 561, 701, 1142
RseI CAYNNNNRTG 6 cut(s) 450, 540, 585, 596, 737, 1229
SacI GAGCTC 1 cut(s) 1401
SaqAI TTAA 2 cut(s) 504, 843
SatI GCNGC 4 cut(s) 10, 529, 532, 1338
Sau3AI GATC 6 cut(s) 63, 178, 421, 883, 895, 1114
Sau96I GGNCC 5 cut(s) 204, 214, 303, 613, 862
SchI GAGTC 1 cut(s) 9
ScrFI CCNGG 1 cut(s) 29
SduI GDGCHC 1 cut(s) 1401
SfaNI GCATC 3 cut(s) 990, 1145, 1188
SinI GGWCC 2 cut(s) 204, 214
SmiMI CAYNNNNRTG 6 cut(s) 450, 540, 585, 596, 737, 1229
SnaBI TACGTA 1 cut(s) 409
SphI GCATGC 1 cut(s) 1112
Sse9I AATT 6 cut(s) 106, 182, 394, 797, 1014, 1315
SsiI CCGC 3 cut(s) 10, 335, 1338
SspMI CTAG 2 cut(s) 770, 1260
SstI GAGCTC 1 cut(s) 1401
StyD4I CCNGG 1 cut(s) 27
StyI CCWWGG 2 cut(s) 535, 819
TaaI ACNGT 7 cut(s) 347, 858, 1012, 1188, 1237, 1296, 1423
TaiI ACGT 3 cut(s) 38, 411, 789
TaqI TCGA 1 cut(s) 22
TasI AATT 6 cut(s) 106, 182, 394, 797, 1014, 1315
TatI WGTACW 2 cut(s) 398, 700
TauI GCSGC 2 cut(s) 12, 1340
TfiI GAWTC 2 cut(s) 112, 281
Tru1I TTAA 2 cut(s) 504, 843
Tru9I TTAA 2 cut(s) 504, 843
TscAI CASTG 2 cut(s) 966, 1124
TseI GCWGC 2 cut(s) 528, 531
TspGWI ACGGA 1 cut(s) 462
TspRI CASTG 2 cut(s) 966, 1124
Tth111I GACNNNGTC 1 cut(s) 18
VpaK11BI GGWCC 2 cut(s) 204, 214
XapI RAATTY 1 cut(s) 106
XceI RCATGY 3 cut(s) 595, 1078, 1112
XmnI GAANNNNTTC 2 cut(s) 765, 1382
XspI CTAG 2 cut(s) 770, 1260
Zsp2I ATGCAT 3 cut(s) 435, 588, 1222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.