DNA polymerase III, delta subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g27010 |
| rosa_chinensis | RchiOBHm_Chr7g0217971 |
| rosa_laevigata | RLG00000002428 |
| rosa_multiflora | Rmu_co8458853.1_g000001 Rmu_sc0014729.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00241570 Rroxscaffold_3G00241580 Rroxscaffold_3G00241590 |
| rosa_rugosa | Rorug07G0172500 |
| rosa_samantha | Rh7AG314700 Rh7AG314800 Rh7AG314900 Rh7BG305000 Rh7BG305100 Rh7BG305200 Rh7BG305300 Rh7CG332200 Rh7CG332300 Rh7CG332400 Rh7DG312900 Rh7DG313000 Rh7DG313100 |
| rosa_wichuraiana | Rw0G017310 Rw7G026610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 237 |
| AccIII | TCCGGA | 1 cut(s) | 11 |
| AclWI | GGATC | 1 cut(s) | 202 |
| AgsI | TTSAA | 1 cut(s) | 68 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 101, 133 |
| AluBI | AGCT | 2 cut(s) | 49, 211 |
| AluI | AGCT | 2 cut(s) | 49, 211 |
| Alw21I | GWGCWC | 1 cut(s) | 204 |
| Alw26I | GTCTC | 1 cut(s) | 9 |
| AlwI | GGATC | 1 cut(s) | 202 |
| Aor13HI | TCCGGA | 1 cut(s) | 11 |
| ApeKI | GCWGC | 2 cut(s) | 46, 211 |
| AsuHPI | GGTGA | 1 cut(s) | 97 |
| Bbv12I | GWGCWC | 1 cut(s) | 204 |
| BbvI | GCAGC | 2 cut(s) | 58, 198 |
| BcoDI | GTCTC | 1 cut(s) | 9 |
| BfmI | CTRYAG | 1 cut(s) | 168 |
| BisI | GCNGC | 2 cut(s) | 47, 212 |
| BlsI | GCNGC | 2 cut(s) | 48, 213 |
| BmsI | GCATC | 2 cut(s) | 121, 223 |
| BsaWI | WCCGGW | 1 cut(s) | 11 |
| Bse1I | ACTGG | 1 cut(s) | 64 |
| BseAI | TCCGGA | 1 cut(s) | 11 |
| BseGI | GGATG | 1 cut(s) | 214 |
| BseMII | CTCAG | 1 cut(s) | 23 |
| BseNI | ACTGG | 1 cut(s) | 64 |
| BseXI | GCAGC | 2 cut(s) | 58, 198 |
| BsiHKAI | GWGCWC | 1 cut(s) | 204 |
| BsiSI | CCGG | 1 cut(s) | 12 |
| BsmAI | GTCTC | 1 cut(s) | 9 |
| Bsp1286I | GDGCHC | 1 cut(s) | 204 |
| Bsp13I | TCCGGA | 1 cut(s) | 11 |
| Bsp143I | GATC | 1 cut(s) | 194 |
| BspCNI | CTCAG | 1 cut(s) | 24 |
| BspEI | TCCGGA | 1 cut(s) | 11 |
| BspPI | GGATC | 1 cut(s) | 202 |
| BsrI | ACTGG | 1 cut(s) | 64 |
| BssMI | GATC | 1 cut(s) | 194 |
| BssNAI | GTATAC | 1 cut(s) | 238 |
| Bst1107I | GTATAC | 1 cut(s) | 238 |
| Bst4CI | ACNGT | 2 cut(s) | 206, 297 |
| Bst6I | CTCTTC | 1 cut(s) | 154 |
| BstDEI | CTNAG | 1 cut(s) | 32 |
| BstF5I | GGATG | 1 cut(s) | 214 |
| BstKTI | GATC | 1 cut(s) | 197 |
| BstMAI | GTCTC | 1 cut(s) | 9 |
| BstMBI | GATC | 1 cut(s) | 194 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 208 |
| BstNSI | RCATGY | 1 cut(s) | 115 |
| BstSFI | CTRYAG | 1 cut(s) | 168 |
| BstV1I | GCAGC | 2 cut(s) | 58, 198 |
| BstZ17I | GTATAC | 1 cut(s) | 238 |
| BtsCI | GGATG | 1 cut(s) | 214 |
| BtsIMutI | CAGTG | 1 cut(s) | 127 |
| CviAII | CATG | 1 cut(s) | 112 |
| CviJI | RGCY | 3 cut(s) | 49, 128, 211 |
| CviKI_1 | RGCY | 3 cut(s) | 49, 128, 211 |
| DdeI | CTNAG | 1 cut(s) | 32 |
| DpnI | GATC | 1 cut(s) | 196 |
| DpnII | GATC | 1 cut(s) | 194 |
| Eam1104I | CTCTTC | 1 cut(s) | 154 |
| EarI | CTCTTC | 1 cut(s) | 154 |
| FaeI | CATG | 1 cut(s) | 115 |
| FatI | CATG | 1 cut(s) | 111 |
| FblI | GTMKAC | 1 cut(s) | 237 |
| Fnu4HI | GCNGC | 2 cut(s) | 47, 212 |
| FokI | GGATG | 1 cut(s) | 201 |
| Fsp4HI | GCNGC | 2 cut(s) | 47, 212 |
| GluI | GCNGC | 2 cut(s) | 47, 212 |
| HapII | CCGG | 1 cut(s) | 12 |
| Hin1II | CATG | 1 cut(s) | 115 |
| HpaII | CCGG | 1 cut(s) | 12 |
| HphI | GGTGA | 1 cut(s) | 97 |
| Hpy166II | GTNNAC | 1 cut(s) | 238 |
| Hpy188I | TCNGA | 1 cut(s) | 199 |
| Hpy188III | TCNNGA | 2 cut(s) | 12, 140 |
| Hpy8I | GTNNAC | 1 cut(s) | 238 |
| HpyCH4III | ACNGT | 2 cut(s) | 206, 297 |
| HpyCH4V | TGCA | 4 cut(s) | 25, 41, 187, 214 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 208 |
| HpyF3I | CTNAG | 1 cut(s) | 32 |
| Hsp92II | CATG | 1 cut(s) | 115 |
| Kpn2I | TCCGGA | 1 cut(s) | 11 |
| Kzo9I | GATC | 1 cut(s) | 194 |
| LpnPI | CCDG | 4 cut(s) | 25, 44, 45, 153 |
| Lsp1109I | GCAGC | 2 cut(s) | 58, 198 |
| LweI | GCATC | 2 cut(s) | 121, 223 |
| MalI | GATC | 1 cut(s) | 196 |
| MboI | GATC | 1 cut(s) | 194 |
| MboII | GAAGA | 2 cut(s) | 141, 144 |
| MfeI | CAATTG | 1 cut(s) | 89 |
| MhlI | GDGCHC | 1 cut(s) | 204 |
| MluCI | AATT | 2 cut(s) | 89, 222 |
| MnlI | CCTC | 4 cut(s) | 118, 157, 185, 311 |
| MroI | TCCGGA | 1 cut(s) | 11 |
| MslI | CAYNNNNRTG | 1 cut(s) | 110 |
| MspA1I | CMGCKG | 1 cut(s) | 49 |
| MspI | CCGG | 1 cut(s) | 12 |
| MunI | CAATTG | 1 cut(s) | 89 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 208 |
| NdeII | GATC | 1 cut(s) | 194 |
| NlaIII | CATG | 1 cut(s) | 115 |
| NspI | RCATGY | 1 cut(s) | 115 |
| PkrI | GCNGC | 2 cut(s) | 48, 213 |
| PvuII | CAGCTG | 1 cut(s) | 49 |
| RseI | CAYNNNNRTG | 1 cut(s) | 110 |
| SatI | GCNGC | 2 cut(s) | 47, 212 |
| Sau3AI | GATC | 1 cut(s) | 194 |
| SduI | GDGCHC | 1 cut(s) | 204 |
| SetI | ASST | 3 cut(s) | 51, 149, 213 |
| SfaNI | GCATC | 2 cut(s) | 121, 223 |
| SfcI | CTRYAG | 1 cut(s) | 168 |
| SgeI | CNNG | 7 cut(s) | 24, 43, 54, 72, 124, 152, 200 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 110 |
| Sse9I | AATT | 2 cut(s) | 89, 222 |
| TaaI | ACNGT | 2 cut(s) | 206, 297 |
| TasI | AATT | 2 cut(s) | 89, 222 |
| TscAI | CASTG | 1 cut(s) | 127 |
| TseI | GCWGC | 2 cut(s) | 46, 211 |
| TspDTI | ATGAA | 1 cut(s) | 217 |
| TspRI | CASTG | 1 cut(s) | 127 |
| XceI | RCATGY | 1 cut(s) | 115 |
| XmiI | GTMKAC | 1 cut(s) | 237 |