Rh7BG382600

Proteinase inhibitor type-2 CEVI57-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
41324412 .. 41327453
3042 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG382600.1

Sequence Viewer

Length: 510 bp
ATGGCTAGAGACAAGAGTATGGGTGCAATAGTTCTTCTGCTTATTTGTGGTTCAATCCTACTGGGTATGAATCCAACTGAGGCCAAAGTTTGCCTTCAAATTTGCTACGAGGCAGCTTATATGACTTGCCCGTCTTCAGGCTCTACGCATCTTTCGCCATCTTGCAACTGTTGCTTAGCTCCGGAGGTCGGCTGCAAAATTTACAACTCTGACGGAACTCAAATCTGTACTAGCTTGTGTTCACAGCCTCAAAACTCAAAGAAAAACATGGCTAGAGACAAAAGTATTATTGCAATAGTTCTTCTCCTTGTTTGTGGTTCAATCATACTGGGAGTGATTCCAACTGAAGCCAAAGTTTGCCCTCTAATTTGCTATGATGCAGCTGCTTATATGACTTGCCCGTCTTCAGGAAACGAGCATCTTTCACCACTCTGCAACTGTTGCTTAGCCTCGGAACCAGGCTGCGCCCTTTACCTGTCCGATGGAACTCGCCTCTGTACTAGTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

169

Amino Acids

17.73

Weight (kDa)

6.05

Isoelectric Point (pI)

47.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Prot_inhib_II PF02428 29 - 77 1.7e-13 Potato type II proteinase inhibitor family
Prot_inhib_II PF02428 118 - 167 6.4e-15 Potato type II proteinase inhibitor family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 130, 400
AccIII TCCGGA 1 cut(s) 181
AcsI RAATTY 2 cut(s) 99, 198
AcuI CTGAAG 3 cut(s) 120, 366, 390
AfaI GTAC 3 cut(s) 229, 499, 505
AfiI CCNNNNNNNGG 3 cut(s) 137, 188, 407
AgsI TTSAA 3 cut(s) 54, 98, 321
AhlI ACTAGT 1 cut(s) 500
AjnI CCWGG 1 cut(s) 457
AluBI AGCT 4 cut(s) 116, 179, 234, 383
AluI AGCT 4 cut(s) 116, 179, 234, 383
Alw26I GTCTC 2 cut(s) 3, 270
Aor13HI TCCGGA 1 cut(s) 181
AoxI GGCC 1 cut(s) 81
ApeKI GCWGC 5 cut(s) 113, 192, 380, 383, 462
ApoI RAATTY 2 cut(s) 99, 198
AspLEI GCGC 1 cut(s) 467
AsuHPI GGTGA 1 cut(s) 417
BbsI GAAGAC 2 cut(s) 126, 396
BbvI GCAGC 5 cut(s) 125, 179, 370, 392, 449
BccI CCATC 2 cut(s) 166, 476
BciT130I CCWGG 1 cut(s) 459
BcoDI GTCTC 2 cut(s) 3, 270
BcuI ACTAGT 1 cut(s) 500
BfaI CTAG 4 cut(s) 6, 231, 273, 501
BisI GCNGC 5 cut(s) 114, 193, 381, 384, 463
BlpI GCTNAGC 2 cut(s) 175, 445
BlsI GCNGC 5 cut(s) 115, 194, 382, 385, 464
BmcAI AGTACT 1 cut(s) 505
Bme1390I CCNGG 1 cut(s) 459
BmiI GGNNCC 1 cut(s) 456
BmrFI CCNGG 1 cut(s) 459
BmrI ACTGGG 2 cut(s) 71, 338
BmsI GCATC 3 cut(s) 157, 367, 427
BmuI ACTGGG 2 cut(s) 71, 338
BpiI GAAGAC 2 cut(s) 126, 396
Bpu1102I GCTNAGC 2 cut(s) 175, 445
BsaJI CCNNGG 1 cut(s) 450
BsaWI WCCGGW 1 cut(s) 181
Bsc4I CCNNNNNNNGG 3 cut(s) 137, 188, 407
Bse1I ACTGG 2 cut(s) 66, 333
BseAI TCCGGA 1 cut(s) 181
BseBI CCWGG 1 cut(s) 459
BseDI CCNNGG 1 cut(s) 450
BseLI CCNNNNNNNGG 3 cut(s) 137, 188, 407
BseMII CTCAG 1 cut(s) 69
BseNI ACTGG 2 cut(s) 66, 333
BseXI GCAGC 5 cut(s) 125, 179, 370, 392, 449
BshFI GGCC 1 cut(s) 83
BsiSI CCGG 1 cut(s) 182
BslI CCNNNNNNNGG 3 cut(s) 137, 188, 407
BsmAI GTCTC 2 cut(s) 3, 270
BsnI GGCC 1 cut(s) 83
Bsp13I TCCGGA 1 cut(s) 181
Bsp1720I GCTNAGC 2 cut(s) 175, 445
BspANI GGCC 1 cut(s) 83
BspCNI CTCAG 1 cut(s) 70
BspEI TCCGGA 1 cut(s) 181
BspLI GGNNCC 1 cut(s) 456
BsrI ACTGG 2 cut(s) 66, 333
BssECI CCNNGG 1 cut(s) 450
Bst2UI CCWGG 1 cut(s) 459
Bst4CI ACNGT 2 cut(s) 170, 440
BstAPI GCANNNNNTGC 2 cut(s) 171, 441
BstDEI CTNAG 3 cut(s) 78, 175, 445
BstHHI GCGC 1 cut(s) 467
BstMAI GTCTC 2 cut(s) 3, 270
BstMWI GCNNNNNNNGC 3 cut(s) 154, 171, 441
BstNI CCWGG 1 cut(s) 459
BstSCI CCNGG 1 cut(s) 457
BstV1I GCAGC 5 cut(s) 125, 179, 370, 392, 449
BstV2I GAAGAC 2 cut(s) 126, 396
BsuRI GGCC 1 cut(s) 83
CfoI GCGC 1 cut(s) 467
Csp6I GTAC 3 cut(s) 228, 498, 504
CviAII CATG 1 cut(s) 268
CviQI GTAC 3 cut(s) 228, 498, 504
DdeI CTNAG 3 cut(s) 78, 175, 445
DrdI GACNNNNNNGTC 2 cut(s) 130, 400
DseDI GACNNNNNNGTC 2 cut(s) 130, 400
Eco57I CTGAAG 3 cut(s) 120, 366, 390
EcoRII CCWGG 1 cut(s) 457
FaeI CATG 1 cut(s) 271
FaiI YATR 9 cut(s) 20, 68, 120, 122, 269, 326, 375, 390, 392
FalI AAGNNNNNCTT 2 cut(s) 78, 110
FatI CATG 1 cut(s) 267
Fnu4HI GCNGC 5 cut(s) 114, 193, 381, 384, 463
Fsp4HI GCNGC 5 cut(s) 114, 193, 381, 384, 463
FspBI CTAG 4 cut(s) 6, 231, 273, 501
GlaI GCGC 1 cut(s) 466
GluI GCNGC 5 cut(s) 114, 193, 381, 384, 463
HaeIII GGCC 1 cut(s) 83
HapII CCGG 1 cut(s) 182
HhaI GCGC 1 cut(s) 467
Hin1II CATG 1 cut(s) 271
Hin6I GCGC 1 cut(s) 465
HinP1I GCGC 1 cut(s) 465
HinfI GANTC 2 cut(s) 70, 337
HpaII CCGG 1 cut(s) 182
HphI GGTGA 1 cut(s) 417
Hpy166II GTNNAC 1 cut(s) 242
Hpy188I TCNGA 3 cut(s) 211, 454, 481
Hpy188III TCNNGA 2 cut(s) 182, 408
Hpy8I GTNNAC 1 cut(s) 242
HpyAV CCTTC 1 cut(s) 104
HpyCH4III ACNGT 2 cut(s) 170, 440
HpyCH4V TGCA 6 cut(s) 26, 165, 195, 293, 380, 435
HpyF10VI GCNNNNNNNGC 3 cut(s) 154, 171, 441
HpyF3I CTNAG 3 cut(s) 78, 175, 445
Hsp92II CATG 1 cut(s) 271
HspAI GCGC 1 cut(s) 465
Kpn2I TCCGGA 1 cut(s) 181
LmnI GCTCC 1 cut(s) 184
LpnPI CCDG 8 cut(s) 47, 123, 195, 314, 393, 444, 471, 488
Lsp1109I GCAGC 5 cut(s) 125, 179, 370, 392, 449
LweI GCATC 3 cut(s) 157, 367, 427
MaeI CTAG 4 cut(s) 6, 231, 273, 501
MboII GAAGA 4 cut(s) 26, 126, 293, 396
MluCI AATT 3 cut(s) 99, 198, 366
MmeI TCCRAC 2 cut(s) 98, 365
MnlI CCTC 7 cut(s) 73, 103, 178, 258, 372, 460, 503
MroI TCCGGA 1 cut(s) 181
MspA1I CMGCKG 1 cut(s) 383
MspI CCGG 1 cut(s) 182
MspR9I CCNGG 1 cut(s) 459
MvaI CCWGG 1 cut(s) 459
MwoI GCNNNNNNNGC 3 cut(s) 154, 171, 441
NlaIII CATG 1 cut(s) 271
NlaIV GGNNCC 1 cut(s) 456
PfeI GAWTC 2 cut(s) 70, 337
PkrI GCNGC 5 cut(s) 115, 194, 382, 385, 464
Psp6I CCWGG 1 cut(s) 457
PspGI CCWGG 1 cut(s) 457
PspN4I GGNNCC 1 cut(s) 456
PvuII CAGCTG 1 cut(s) 383
RsaI GTAC 3 cut(s) 229, 499, 505
RsaNI GTAC 3 cut(s) 228, 498, 504
SatI GCNGC 5 cut(s) 114, 193, 381, 384, 463
ScaI AGTACT 1 cut(s) 505
ScrFI CCNGG 1 cut(s) 459
SetI ASST 6 cut(s) 118, 181, 189, 236, 385, 477
SfaNI GCATC 3 cut(s) 157, 367, 427
SpeI ACTAGT 1 cut(s) 500
Sse9I AATT 3 cut(s) 99, 198, 366
SspMI CTAG 4 cut(s) 6, 231, 273, 501
StyD4I CCNGG 1 cut(s) 457
TaaI ACNGT 2 cut(s) 170, 440
TasI AATT 3 cut(s) 99, 198, 366
TatI WGTACW 3 cut(s) 227, 497, 503
TfiI GAWTC 2 cut(s) 70, 337
TseI GCWGC 5 cut(s) 113, 192, 380, 383, 462
TspDTI ATGAA 1 cut(s) 83
TspGWI ACGGA 1 cut(s) 228
XapI RAATTY 2 cut(s) 99, 198
XspI CTAG 4 cut(s) 6, 231, 273, 501
ZrmI AGTACT 1 cut(s) 505
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.