No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0349621 RchiOBHm_Chr2g0097751 RchiOBHm_Chr2g0174501 RchiOBHm_Chr5g0079771 RchiOBHm_Chr6g0277391 |
| rosa_laevigata | RLG00000028020 |
| rosa_roxburghii | Rroxscaffold_2G00118550 |
| rosa_rugosa | Rorug04G0139100 |
| rosa_samantha | Rh2BG337100 Rh2BG669400 Rh3AG337900 Rh3BG074300 Rh3CG073800 Rh3CG372100 Rh3DG372700 Rh4AG102200 Rh4BG325700 Rh4CG340700 Rh5BG287600 Rh5DG383600 Rh7BG440800 Rh7CG197700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 94 |
| AccI | GTMKAC | 1 cut(s) | 22 |
| AcsI | RAATTY | 1 cut(s) | 192 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 94 |
| AgsI | TTSAA | 2 cut(s) | 149, 160 |
| AjnI | CCWGG | 1 cut(s) | 75 |
| AluBI | AGCT | 2 cut(s) | 145, 225 |
| AluI | AGCT | 2 cut(s) | 145, 225 |
| ApeKI | GCWGC | 1 cut(s) | 142 |
| ApoI | RAATTY | 1 cut(s) | 192 |
| BbvI | GCAGC | 1 cut(s) | 154 |
| BccI | CCATC | 1 cut(s) | 178 |
| BciT130I | CCWGG | 1 cut(s) | 77 |
| BglII | AGATCT | 1 cut(s) | 51 |
| BisI | GCNGC | 1 cut(s) | 143 |
| BlsI | GCNGC | 1 cut(s) | 144 |
| Bme1390I | CCNGG | 1 cut(s) | 77 |
| BmrFI | CCNGG | 1 cut(s) | 77 |
| BpmI | CTGGAG | 2 cut(s) | 76, 116 |
| BsaJI | CCNNGG | 1 cut(s) | 175 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 94 |
| Bse3DI | GCAATG | 1 cut(s) | 137 |
| BseBI | CCWGG | 1 cut(s) | 77 |
| BseDI | CCNNGG | 1 cut(s) | 175 |
| BseGI | GGATG | 2 cut(s) | 10, 189 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 94 |
| BseMI | GCAATG | 1 cut(s) | 137 |
| BseXI | GCAGC | 1 cut(s) | 154 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 94 |
| BsmI | GAATGC | 1 cut(s) | 152 |
| Bsp143I | GATC | 2 cut(s) | 51, 91 |
| Bsp19I | CCATGG | 1 cut(s) | 175 |
| BsrDI | GCAATG | 1 cut(s) | 137 |
| BssECI | CCNNGG | 1 cut(s) | 175 |
| BssMI | GATC | 2 cut(s) | 51, 91 |
| BssT1I | CCWWGG | 1 cut(s) | 175 |
| Bst2UI | CCWGG | 1 cut(s) | 77 |
| BstDSI | CCRYGG | 1 cut(s) | 175 |
| BstF5I | GGATG | 2 cut(s) | 10, 189 |
| BstKTI | GATC | 2 cut(s) | 54, 94 |
| BstMBI | GATC | 2 cut(s) | 51, 91 |
| BstNI | CCWGG | 1 cut(s) | 77 |
| BstSCI | CCNGG | 1 cut(s) | 75 |
| BstV1I | GCAGC | 1 cut(s) | 154 |
| BstX2I | RGATCY | 1 cut(s) | 51 |
| BstYI | RGATCY | 1 cut(s) | 51 |
| BtgI | CCRYGG | 1 cut(s) | 175 |
| BtsCI | GGATG | 2 cut(s) | 10, 189 |
| CviAII | CATG | 3 cut(s) | 10, 89, 176 |
| CviJI | RGCY | 3 cut(s) | 145, 180, 225 |
| CviKI_1 | RGCY | 3 cut(s) | 145, 180, 225 |
| DpnI | GATC | 2 cut(s) | 53, 93 |
| DpnII | GATC | 2 cut(s) | 51, 91 |
| Eco130I | CCWWGG | 1 cut(s) | 175 |
| EcoRII | CCWGG | 1 cut(s) | 75 |
| EcoT14I | CCWWGG | 1 cut(s) | 175 |
| ErhI | CCWWGG | 1 cut(s) | 175 |
| FaeI | CATG | 3 cut(s) | 13, 92, 179 |
| FaiI | YATR | 5 cut(s) | 11, 82, 90, 170, 177 |
| FatI | CATG | 3 cut(s) | 9, 88, 175 |
| FblI | GTMKAC | 1 cut(s) | 22 |
| Fnu4HI | GCNGC | 1 cut(s) | 143 |
| FokI | GGATG | 2 cut(s) | 17, 196 |
| Fsp4HI | GCNGC | 1 cut(s) | 143 |
| GluI | GCNGC | 1 cut(s) | 143 |
| GsuI | CTGGAG | 2 cut(s) | 76, 116 |
| Hin1II | CATG | 3 cut(s) | 13, 92, 179 |
| HincII | GTYRAC | 1 cut(s) | 23 |
| HindII | GTYRAC | 1 cut(s) | 23 |
| HinfI | GANTC | 1 cut(s) | 64 |
| Hpy166II | GTNNAC | 1 cut(s) | 23 |
| Hpy188I | TCNGA | 1 cut(s) | 123 |
| Hpy188III | TCNNGA | 2 cut(s) | 55, 95 |
| Hpy8I | GTNNAC | 1 cut(s) | 23 |
| Hpy99I | CGWCG | 1 cut(s) | 24 |
| HpyCH4IV | ACGT | 1 cut(s) | 19 |
| HpyCH4V | TGCA | 2 cut(s) | 142, 168 |
| HpySE526I | ACGT | 1 cut(s) | 19 |
| Hsp92II | CATG | 3 cut(s) | 13, 92, 179 |
| Kzo9I | GATC | 2 cut(s) | 51, 91 |
| LpnPI | CCDG | 5 cut(s) | 40, 62, 80, 89, 166 |
| Lsp1109I | GCAGC | 1 cut(s) | 154 |
| MaeII | ACGT | 1 cut(s) | 19 |
| MaeIII | GTNAC | 1 cut(s) | 131 |
| MalI | GATC | 2 cut(s) | 53, 93 |
| MboI | GATC | 2 cut(s) | 51, 91 |
| MboII | GAAGA | 1 cut(s) | 148 |
| MflI | RGATCY | 1 cut(s) | 51 |
| MluCI | AATT | 1 cut(s) | 192 |
| MmeI | TCCRAC | 2 cut(s) | 41, 81 |
| MseI | TTAA | 1 cut(s) | 30 |
| MspR9I | CCNGG | 1 cut(s) | 77 |
| Mva1269I | GAATGC | 1 cut(s) | 152 |
| MvaI | CCWGG | 1 cut(s) | 77 |
| NcoI | CCATGG | 1 cut(s) | 175 |
| NdeII | GATC | 2 cut(s) | 51, 91 |
| NlaIII | CATG | 3 cut(s) | 13, 92, 179 |
| NmuCI | GTSAC | 1 cut(s) | 131 |
| PctI | GAATGC | 1 cut(s) | 152 |
| PfeI | GAWTC | 1 cut(s) | 64 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 94 |
| PkrI | GCNGC | 1 cut(s) | 144 |
| Psp6I | CCWGG | 1 cut(s) | 75 |
| PspGI | CCWGG | 1 cut(s) | 75 |
| PsuI | RGATCY | 1 cut(s) | 51 |
| SalI | GTCGAC | 1 cut(s) | 21 |
| SaqAI | TTAA | 1 cut(s) | 30 |
| SatI | GCNGC | 1 cut(s) | 143 |
| Sau3AI | GATC | 2 cut(s) | 51, 91 |
| ScrFI | CCNGG | 1 cut(s) | 77 |
| SetI | ASST | 4 cut(s) | 22, 133, 147, 227 |
| Sse9I | AATT | 1 cut(s) | 192 |
| StyD4I | CCNGG | 1 cut(s) | 75 |
| StyI | CCWWGG | 1 cut(s) | 175 |
| TaiI | ACGT | 1 cut(s) | 22 |
| TaqI | TCGA | 1 cut(s) | 22 |
| TasI | AATT | 1 cut(s) | 192 |
| TfiI | GAWTC | 1 cut(s) | 64 |
| Tru1I | TTAA | 1 cut(s) | 30 |
| Tru9I | TTAA | 1 cut(s) | 30 |
| TseFI | GTSAC | 1 cut(s) | 131 |
| TseI | GCWGC | 1 cut(s) | 142 |
| Tsp45I | GTSAC | 1 cut(s) | 131 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 94 |
| XapI | RAATTY | 1 cut(s) | 192 |
| XmiI | GTMKAC | 1 cut(s) | 22 |