Rh7CG318400

cysteine-type peptidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0008890
Physical Location & Seq
Reverse (-)
34039128 .. 34040389
1262 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG318400.1

Sequence Viewer

Length: 879 bp
ATGGCTATTGTACCCTGCACCTTCTCTTCTCTCTTGTTCATCACCATCATGCTTGGAACTATGGCAACTGCATCATCCCACATTACGCAAAAGTTTGAAGAGTGGATGGTAAAGCATAACCGCGTCTACTCCAATAATTCAGAAAAGGAGAGGCGATACAAAATTTTCAAGGAAAACTTTAAGCAAAGGCGAGCCAGGTATAACACTGAACCTAAGCTGAATATATTTGGTGATCACACCGATGATGAACTCCCCAAAGGCTGCGTGAGACTACCCTTAGAACCACTGGAGATTTCCTACAATCCTGCTTTCATTGATGAATTTGCTCCTGACTACAAAAATTGGGCATATGAAGGAGCTGTCACTGAAGTTAGAGACCAGCGGGGCGATACTTGTTGGGCTTTTACAACAGCAGCAGCAATCGAAGGAATTGTAAAAATTAAAAAAGGCGAATTAGTTACATTGTCTCCTCAACAAATTGTAGACTGTACTCTGGCCCGAGAAAAGTATAGAGAGCTCTGGGGACTCAATGGCACAATTGGCAATGGTCACCCAGAAGCGGGGTTTGAATATGCAGCGGACTACGGAATCAACCGGGAGATCACTTATCCATTCATCGGGCGGGACCAACCATGCAACGCCAAATTGGAAAGATATCCTTATACAAAGATAAGTGGTTACATAGGCATACCTCCAAATGATGAAAATCTTGTGAAGAAATATGTGGCTAGCCAACCGATTGCAGCCGTAATGGAAATCACAAGGACATTCCATCATTACACAGATGGTGTATACCAAGATGAATTTGGGGAATGTGGAAGGTTACCAATGAGAAACCGTAGCTATCACGTTGTTACAGTTCTTGGGTATGACAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04140 ko04142 ko04210 ko04612 ko04621 ko04924 map04140 map04142 map04210 map04612 map04621 map04924
Pfam Domains
Protein Families
Granulin Inhibitor_I29 Peptidase_C1

Protein Analysis

292

Amino Acids

33.55

Weight (kDa)

6.41

Isoelectric Point (pI)

33.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I29 PF08246 32 - 84 5.7e-08 Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1 PF00112 110 - 291 2.7e-31 Papain family cysteine protease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 126, 483, 792
AccII CGCG 1 cut(s) 123
AciI CCGC 5 cut(s) 121, 382, 560, 578, 622
AcsI RAATTY 3 cut(s) 162, 320, 803
AcuI CTGAAG 1 cut(s) 387
AfaI GTAC 2 cut(s) 12, 490
AfiI CCNNNNNNNGG 3 cut(s) 559, 560, 617
AgsI TTSAA 3 cut(s) 98, 169, 569
AjnI CCWGG 1 cut(s) 194
AluBI AGCT 4 cut(s) 217, 359, 517, 843
AluI AGCT 4 cut(s) 217, 359, 517, 843
Alw21I GWGCWC 1 cut(s) 519
Alw26I GTCTC 3 cut(s) 262, 369, 471
Ama87I CYCGRG 1 cut(s) 498
AoxI GGCC 1 cut(s) 495
ApeKI GCWGC 5 cut(s) 261, 413, 416, 575, 743
ApoI RAATTY 3 cut(s) 162, 320, 803
AspS9I GGNCC 2 cut(s) 496, 625
AsuC2I CCSGG 1 cut(s) 596
AsuHPI GGTGA 3 cut(s) 34, 242, 542
AsuNHI GCTAGC 1 cut(s) 728
AvaI CYCGRG 1 cut(s) 498
AvaII GGWCC 1 cut(s) 625
BanII GRGCYC 1 cut(s) 519
Bbv12I GWGCWC 1 cut(s) 519
BbvI GCAGC 5 cut(s) 248, 425, 428, 587, 755
BccI CCATC 4 cut(s) 53, 100, 779, 780
BceAI ACGGC 1 cut(s) 731
BciT130I CCWGG 1 cut(s) 196
BclI TGATCA 1 cut(s) 232
BcnI CCSGG 1 cut(s) 596
BcoDI GTCTC 3 cut(s) 262, 369, 471
BfaI CTAG 1 cut(s) 729
BisI GCNGC 5 cut(s) 262, 414, 417, 576, 744
BlsI GCNGC 5 cut(s) 263, 415, 418, 577, 745
Bme1390I CCNGG 2 cut(s) 196, 596
Bme18I GGWCC 1 cut(s) 625
BmeT110I CYCGRG 1 cut(s) 498
BmgT120I GGNCC 2 cut(s) 496, 625
BmiI GGNNCC 1 cut(s) 626
BmrFI CCNGG 2 cut(s) 196, 596
BmsI GCATC 1 cut(s) 80
BmtI GCTAGC 1 cut(s) 732
BpmI CTGGAG 1 cut(s) 308
Bpu10I CCTNAGC 1 cut(s) 213
BpuMI CCSGG 1 cut(s) 596
BsaBI GATNNNNATC 1 cut(s) 705
BsaI GGTCTC 1 cut(s) 369
BsaXI ACNNNNNCTCC 2 cut(s) 451, 481
Bsc4I CCNNNNNNNGG 3 cut(s) 559, 560, 617
Bse1I ACTGG 1 cut(s) 291
Bse3DI GCAATG 1 cut(s) 550
Bse8I GATNNNNATC 1 cut(s) 705
BseBI CCWGG 1 cut(s) 196
BseGI GGATG 2 cut(s) 74, 111
BseJI GATNNNNATC 1 cut(s) 705
BseLI CCNNNNNNNGG 3 cut(s) 559, 560, 617
BseMI GCAATG 1 cut(s) 550
BseNI ACTGG 1 cut(s) 291
BseRI GAGGAG 1 cut(s) 459
BseXI GCAGC 5 cut(s) 248, 425, 428, 587, 755
Bsh1236I CGCG 1 cut(s) 123
BshFI GGCC 1 cut(s) 497
BsiHKAI GWGCWC 1 cut(s) 519
BsiHKCI CYCGRG 1 cut(s) 498
BsiSI CCGG 1 cut(s) 595
BslFI GGGAC 2 cut(s) 537, 638
BslI CCNNNNNNNGG 3 cut(s) 559, 560, 617
BsmAI GTCTC 3 cut(s) 262, 369, 471
BsmFI GGGAC 2 cut(s) 537, 638
BsnI GGCC 1 cut(s) 497
Bso31I GGTCTC 1 cut(s) 369
BsoBI CYCGRG 1 cut(s) 498
Bsp1286I GDGCHC 1 cut(s) 519
Bsp143I GATC 2 cut(s) 232, 600
BspACI CCGC 5 cut(s) 121, 382, 560, 578, 622
BspANI GGCC 1 cut(s) 497
BspFNI CGCG 1 cut(s) 123
BspLI GGNNCC 1 cut(s) 626
BspOI GCTAGC 1 cut(s) 732
BspTNI GGTCTC 1 cut(s) 369
BsrDI GCAATG 1 cut(s) 550
BsrI ACTGG 1 cut(s) 291
BssMI GATC 2 cut(s) 232, 600
BssNAI GTATAC 1 cut(s) 793
Bst1107I GTATAC 1 cut(s) 793
Bst2UI CCWGG 1 cut(s) 196
Bst4CI ACNGT 3 cut(s) 488, 839, 859
Bst6I CTCTTC 2 cut(s) 31, 93
BstC8I GCNNGC 2 cut(s) 192, 730
BstDEI CTNAG 2 cut(s) 213, 277
BstEII GGTNACC 2 cut(s) 548, 822
BstF5I GGATG 2 cut(s) 74, 111
BstFNI CGCG 1 cut(s) 123
BstKTI GATC 2 cut(s) 235, 603
BstMAI GTCTC 3 cut(s) 262, 369, 471
BstMBI GATC 2 cut(s) 232, 600
BstMWI GCNNNNNNNGC 1 cut(s) 540
BstNI CCWGG 1 cut(s) 196
BstPI GGTNACC 2 cut(s) 548, 822
BstSCI CCNGG 2 cut(s) 194, 594
BstUI CGCG 1 cut(s) 123
BstV1I GCAGC 5 cut(s) 248, 425, 428, 587, 755
BstZ17I GTATAC 1 cut(s) 793
BsuRI GGCC 1 cut(s) 497
BtsCI GGATG 2 cut(s) 74, 111
BtsIMutI CAGTG 3 cut(s) 204, 284, 363
Cac8I GCNNGC 2 cut(s) 192, 730
Cfr13I GGNCC 2 cut(s) 496, 625
CseI GACGC 1 cut(s) 112
Csp6I GTAC 2 cut(s) 11, 489
CviAII CATG 2 cut(s) 49, 633
CviQI GTAC 2 cut(s) 11, 489
DdeI CTNAG 2 cut(s) 213, 277
DpnI GATC 2 cut(s) 234, 602
DpnII GATC 2 cut(s) 232, 600
Eam1104I CTCTTC 2 cut(s) 31, 93
EarI CTCTTC 2 cut(s) 31, 93
Ecl136II GAGCTC 1 cut(s) 517
Eco24I GRGCYC 1 cut(s) 519
Eco31I GGTCTC 1 cut(s) 369
Eco32I GATATC 1 cut(s) 656
Eco47I GGWCC 1 cut(s) 625
Eco53kI GAGCTC 1 cut(s) 517
Eco57I CTGAAG 1 cut(s) 387
Eco88I CYCGRG 1 cut(s) 498
Eco91I GGTNACC 2 cut(s) 548, 822
EcoICRI GAGCTC 1 cut(s) 517
EcoO65I GGTNACC 2 cut(s) 548, 822
EcoRII CCWGG 1 cut(s) 194
EcoRV GATATC 1 cut(s) 656
EcoT38I GRGCYC 1 cut(s) 519
FaeI CATG 2 cut(s) 52, 636
FalI AAGNNNNNCTT 4 cut(s) 161, 193, 643, 675
FaqI GGGAC 2 cut(s) 537, 638
FatI CATG 2 cut(s) 48, 632
FauI CCCGC 3 cut(s) 375, 553, 615
FauNDI CATATG 1 cut(s) 349
FbaI TGATCA 1 cut(s) 232
FblI GTMKAC 3 cut(s) 126, 483, 792
Fnu4HI GCNGC 5 cut(s) 262, 414, 417, 576, 744
FokI GGATG 2 cut(s) 61, 118
FriOI GRGCYC 1 cut(s) 519
Fsp4HI GCNGC 5 cut(s) 262, 414, 417, 576, 744
FspBI CTAG 1 cut(s) 729
GluI GCNGC 5 cut(s) 262, 414, 417, 576, 744
GsuI CTGGAG 1 cut(s) 308
HaeIII GGCC 1 cut(s) 497
HapII CCGG 1 cut(s) 595
HgaI GACGC 1 cut(s) 112
Hin1II CATG 2 cut(s) 52, 636
HinfI GANTC 2 cut(s) 525, 588
HpaII CCGG 1 cut(s) 595
HphI GGTGA 3 cut(s) 34, 242, 542
Hpy166II GTNNAC 3 cut(s) 127, 484, 793
Hpy188I TCNGA 1 cut(s) 142
Hpy188III TCNNGA 1 cut(s) 329
Hpy8I GTNNAC 3 cut(s) 127, 484, 793
HpyAV CCTTC 4 cut(s) 31, 347, 419, 813
HpyCH4III ACNGT 3 cut(s) 488, 839, 859
HpyCH4IV ACGT 1 cut(s) 849
HpyCH4V TGCA 5 cut(s) 18, 71, 575, 636, 743
HpyF10VI GCNNNNNNNGC 1 cut(s) 540
HpyF3I CTNAG 2 cut(s) 213, 277
HpySE526I ACGT 1 cut(s) 849
Hsp92II CATG 2 cut(s) 52, 636
Ksp22I TGATCA 1 cut(s) 232
Kzo9I GATC 2 cut(s) 232, 600
LmnI GCTCC 2 cut(s) 331, 356
Lsp1109I GCAGC 5 cut(s) 248, 425, 428, 587, 755
LweI GCATC 1 cut(s) 80
MaeI CTAG 1 cut(s) 729
MaeII ACGT 1 cut(s) 849
MaeIII GTNAC 6 cut(s) 361, 457, 548, 677, 822, 853
MalI GATC 2 cut(s) 234, 602
MboI GATC 2 cut(s) 232, 600
MboII GAAGA 3 cut(s) 18, 110, 727
MfeI CAATTG 1 cut(s) 537
MhlI GDGCHC 1 cut(s) 519
MlyI GAGTC 1 cut(s) 519
MnlI CCTC 3 cut(s) 144, 480, 702
MseI TTAA 2 cut(s) 180, 441
MslI CAYNNNNRTG 2 cut(s) 47, 240
MspA1I CMGCKG 2 cut(s) 382, 578
MspI CCGG 1 cut(s) 595
MspR9I CCNGG 2 cut(s) 196, 596
MunI CAATTG 1 cut(s) 537
MvaI CCWGG 1 cut(s) 196
MvnI CGCG 1 cut(s) 123
MwoI GCNNNNNNNGC 1 cut(s) 540
NciI CCSGG 1 cut(s) 596
NdeI CATATG 1 cut(s) 349
NdeII GATC 2 cut(s) 232, 600
NheI GCTAGC 1 cut(s) 728
NlaIII CATG 2 cut(s) 52, 636
NlaIV GGNNCC 1 cut(s) 626
NmuCI GTSAC 2 cut(s) 361, 548
PfeI GAWTC 1 cut(s) 588
PkrI GCNGC 5 cut(s) 263, 415, 418, 577, 745
PleI GAGTC 1 cut(s) 519
PpsI GAGTC 1 cut(s) 519
Psp124BI GAGCTC 1 cut(s) 519
Psp6I CCWGG 1 cut(s) 194
PspEI GGTNACC 2 cut(s) 548, 822
PspGI CCWGG 1 cut(s) 194
PspN4I GGNNCC 1 cut(s) 626
PspPI GGNCC 2 cut(s) 496, 625
RsaI GTAC 2 cut(s) 12, 490
RsaNI GTAC 2 cut(s) 11, 489
RseI CAYNNNNRTG 2 cut(s) 47, 240
SacI GAGCTC 1 cut(s) 519
SaqAI TTAA 2 cut(s) 180, 441
SatI GCNGC 5 cut(s) 262, 414, 417, 576, 744
Sau3AI GATC 2 cut(s) 232, 600
Sau96I GGNCC 2 cut(s) 496, 625
SchI GAGTC 1 cut(s) 519
ScrFI CCNGG 2 cut(s) 196, 596
SduI GDGCHC 1 cut(s) 519
SfaNI GCATC 1 cut(s) 80
SinI GGWCC 1 cut(s) 625
SmiMI CAYNNNNRTG 2 cut(s) 47, 240
SsiI CCGC 5 cut(s) 121, 382, 560, 578, 622
SspMI CTAG 1 cut(s) 729
SstI GAGCTC 1 cut(s) 519
StyD4I CCNGG 2 cut(s) 194, 594
TaaI ACNGT 3 cut(s) 488, 839, 859
TaiI ACGT 1 cut(s) 852
TaqI TCGA 1 cut(s) 423
TatI WGTACW 1 cut(s) 488
TfiI GAWTC 1 cut(s) 588
Tru1I TTAA 2 cut(s) 180, 441
Tru9I TTAA 2 cut(s) 180, 441
TscAI CASTG 3 cut(s) 211, 291, 370
TseFI GTSAC 2 cut(s) 361, 548
TseI GCWGC 5 cut(s) 261, 413, 416, 575, 743
Tsp45I GTSAC 2 cut(s) 361, 548
TspDTI ATGAA 8 cut(s) 28, 261, 301, 333, 366, 604, 717, 816
TspGWI ACGGA 1 cut(s) 600
TspRI CASTG 3 cut(s) 211, 291, 370
VpaK11BI GGWCC 1 cut(s) 625
XapI RAATTY 3 cut(s) 162, 320, 803
XcmI CCANNNNNNNNNTGG 1 cut(s) 803
XmiI GTMKAC 3 cut(s) 126, 483, 792
XspI CTAG 1 cut(s) 729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.