AT1G03760

Prefoldin subunit

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
941062 .. 943377
2316 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G03760.1

Sequence Viewer

Length: 1176 bp
ATGGAGCCGCCGGCGAAAGGAACGGTGACGCCGTTAGGATTTTCAGAGGAGGATGTTCGAAAAGCAGCAAGTTACATGGAGGAGAAAATCGGAGAGAAGCGAGTAGAGATGAATCGTCTTCAACAGTACGTCGACGAAAACGATAATCTCATCAATCTCGTCAAGAAGCTTCCCGATCAGCTTCATCACAACGTTATGGTTCCATTCGGTAAAATGGCTTTTTTCCCAGGTCGATTGATTCACACCAACGAGTGTTTGGTGTTGTTGGGAGAGAATTACTATACTGATAGATCATCGAAACAAACTGTTGATTTCCTGAAGAGAAGAGACAAGACTTTACAGTCTCAAATTCATTCTCTTAAAGCTGAGATTGAAGATCTTCAAACGGAGGCTTCATTCTTCACTACAACTGCTTCTGAAGTAGCGGATGGACTTGTTGAGATAAGAGAAGAGTATGTAGAAGAAGATTCTTCTGCACCTGTTGTGATACATTCAAGTGAAAAAGAGCCTTGTAATCTTTCTGAAGGAGAGACTGAAGAAGGTGAACTTGAAGACGATGACTTTGCAAGAATCATGGCCAGGTTGAATGAACTTGAAATAGAGGAAGAACTGGAGGGTGAAGATGGGGATAGTAGAGGTGAAGATCCTGATTCTTCAGTAGAAAGTGTGGAACAGATCCAGCATGATTTGGTGAAAGGAAGTAGAGGTGAGACAGACCGTGGTAGGGTTGAATACGGGAAACAAGAAACTACCATATCTGTTCCTAACAAAGCTTCCGGTCATAGCTCTTCACCGAGGGTCTCAGAGCCAAGGGTCGAAGCCAAAATTATTCAAGTGTTACCAGAGACACATCCACACAAAGATCTAGATGATCCGCTGAATCGTATCCGACCAATGGCACAATATCTTTCCAAAGAAGGTCAATCACGTGGCGGAACCCCTCAGCAAAACGCTGAAACATGGAAAGACTTTCGAACGAATGCAAAAACCAATGTTTTAGGACCACAAAAGATTGAGCCACAGAAGCCAGAGCCCGAGTTTGATTCTACCAAGGCTTTTACTGGATCAATCGTAGAGCATGCCCATATTCTAGAGACCAGCGCACACAGCCAAACGCAGTCTTCTACGTCTCAACCGTCTAAACCAGTGTCGAGATTCAGGGCGAAGAGAAGGTAG

Protein Analysis

391

Amino Acids

44.06

Weight (kDa)

4.97

Isoelectric Point (pI)

62.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Prefoldin PF02996 27 - 142 4e-28 Prefoldin subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 340
AccI GTMKAC 1 cut(s) 132
AciI CCGC 4 cut(s) 8, 425, 875, 933
AclI AACGTT 1 cut(s) 192
AclWI GGATC 4 cut(s) 638, 670, 866, 1072
AcoI YGGCCR 1 cut(s) 576
AcsI RAATTY 1 cut(s) 348
AcuI CTGAAG 5 cut(s) 338, 438, 543, 555, 639
AcvI CACGTG 1 cut(s) 929
AcyI GRCGYC 1 cut(s) 29
AfaI GTAC 1 cut(s) 128
AfiI CCNNNNNNNGG 3 cut(s) 17, 724, 895
AgsI TTSAA 9 cut(s) 122, 374, 383, 495, 551, 586, 596, 731, 833
AjnI CCWGG 2 cut(s) 226, 578
AluBI AGCT 5 cut(s) 169, 181, 365, 773, 786
AluI AGCT 5 cut(s) 169, 181, 365, 773, 786
Alw26I GTCTC 8 cut(s) 321, 348, 524, 704, 805, 839, 1088, 1134
AlwI GGATC 4 cut(s) 638, 670, 866, 1072
Ama87I CYCGRG 1 cut(s) 1034
AoxI GGCC 1 cut(s) 576
ApeKI GCWGC 1 cut(s) 65
ApoI RAATTY 1 cut(s) 348
ArsI GACNNNNNNTTYG 2 cut(s) 545, 577
Asp700I GAANNNNTTC 1 cut(s) 378
AspLEI GCGC 1 cut(s) 1103
AspS9I GGNCC 1 cut(s) 1001
AsuHPI GGTGA 7 cut(s) 37, 554, 629, 650, 703, 719, 783
AsuII TTCGAA 2 cut(s) 58, 973
AvaI CYCGRG 1 cut(s) 1034
AvaII GGWCC 1 cut(s) 1001
BalI TGGCCA 1 cut(s) 578
BanII GRGCYC 1 cut(s) 1035
BbrPI CACGTG 1 cut(s) 929
BbsI GAAGAC 3 cut(s) 110, 558, 1113
BbvCI CCTCAGC 1 cut(s) 942
BbvI GCAGC 1 cut(s) 77
BccI CCATC 2 cut(s) 422, 617
BceAI ACGGC 1 cut(s) 16
BcgI CGANNNNNNTGC 2 cut(s) 545, 579
BciT130I CCWGG 2 cut(s) 228, 580
BciVI GTATCC 1 cut(s) 896
BcoDI GTCTC 8 cut(s) 321, 348, 524, 704, 805, 839, 1088, 1134
BfaI CTAG 2 cut(s) 866, 1091
BfuI GTATCC 1 cut(s) 896
BglII AGATCT 2 cut(s) 376, 862
BisI GCNGC 2 cut(s) 8, 66
BlsI GCNGC 2 cut(s) 9, 67
Bme1390I CCNGG 2 cut(s) 228, 580
Bme18I GGWCC 1 cut(s) 1001
BmeT110I CYCGRG 1 cut(s) 1034
BmgT120I GGNCC 1 cut(s) 1001
BmiI GGNNCC 3 cut(s) 6, 201, 937
BmrFI CCNGG 2 cut(s) 228, 580
BpiI GAAGAC 3 cut(s) 110, 558, 1113
BpmI CTGGAG 1 cut(s) 632
Bpu10I CCTNAGC 1 cut(s) 942
Bpu14I TTCGAA 2 cut(s) 58, 973
BsaAI YACGTR 1 cut(s) 929
BsaHI GRCGYC 1 cut(s) 29
BsaI GGTCTC 2 cut(s) 805, 1088
BsaJI CCNNGG 5 cut(s) 226, 718, 794, 809, 1050
BsaWI WCCGGW 1 cut(s) 776
Bsc4I CCNNNNNNNGG 3 cut(s) 17, 724, 895
Bse118I RCCGGY 1 cut(s) 10
Bse1I ACTGG 3 cut(s) 615, 1066, 1145
BseBI CCWGG 2 cut(s) 228, 580
BseDI CCNNGG 5 cut(s) 226, 718, 794, 809, 1050
BseGI GGATG 3 cut(s) 58, 433, 850
BseLI CCNNNNNNNGG 3 cut(s) 17, 724, 895
BseMII CTCAG 3 cut(s) 357, 816, 956
BseNI ACTGG 3 cut(s) 615, 1066, 1145
BseRI GAGGAG 2 cut(s) 62, 95
BseXI GCAGC 1 cut(s) 77
BsgI GTGCAG 1 cut(s) 459
BshFI GGCC 1 cut(s) 578
BsiHKCI CYCGRG 1 cut(s) 1034
BsiSI CCGG 2 cut(s) 11, 777
BslI CCNNNNNNNGG 3 cut(s) 17, 724, 895
BsmAI GTCTC 8 cut(s) 321, 348, 524, 704, 805, 839, 1088, 1134
BsmBI CGTCTC 1 cut(s) 1134
BsmI GAATGC 1 cut(s) 985
BsnI GGCC 1 cut(s) 578
Bso31I GGTCTC 2 cut(s) 805, 1088
BsoBI CYCGRG 1 cut(s) 1034
Bsp119I TTCGAA 2 cut(s) 58, 973
Bsp1286I GDGCHC 1 cut(s) 1035
Bsp143I GATC 8 cut(s) 175, 290, 376, 643, 675, 862, 871, 1064
BspACI CCGC 4 cut(s) 8, 425, 875, 933
BspANI GGCC 1 cut(s) 578
BspCNI CTCAG 3 cut(s) 358, 815, 955
BspLI GGNNCC 3 cut(s) 6, 201, 937
BspPI GGATC 4 cut(s) 638, 670, 866, 1072
BspQI GCTCTTC 1 cut(s) 793
BspT104I TTCGAA 2 cut(s) 58, 973
BspTNI GGTCTC 2 cut(s) 805, 1088
BsrFI RCCGGY 1 cut(s) 10
BsrI ACTGG 3 cut(s) 615, 1066, 1145
BssAI RCCGGY 1 cut(s) 10
BssECI CCNNGG 5 cut(s) 226, 718, 794, 809, 1050
BssMI GATC 8 cut(s) 175, 290, 376, 643, 675, 862, 871, 1064
BssNI GRCGYC 1 cut(s) 29
BssT1I CCWWGG 2 cut(s) 809, 1050
Bst2UI CCWGG 2 cut(s) 228, 580
Bst4CI ACNGT 6 cut(s) 25, 126, 307, 342, 719, 1137
Bst6I CTCTTC 5 cut(s) 314, 319, 444, 793, 1160
BstACI GRCGYC 1 cut(s) 29
BstBAI YACGTR 1 cut(s) 929
BstBI TTCGAA 2 cut(s) 58, 973
BstC8I GCNNGC 2 cut(s) 12, 1080
BstDEI CTNAG 3 cut(s) 366, 802, 942
BstDSI CCRYGG 1 cut(s) 718
BstF5I GGATG 3 cut(s) 58, 433, 850
BstHHI GCGC 1 cut(s) 1103
BstKTI GATC 8 cut(s) 178, 293, 379, 646, 678, 865, 874, 1067
BstMAI GTCTC 8 cut(s) 321, 348, 524, 704, 805, 839, 1088, 1134
BstMBI GATC 8 cut(s) 175, 290, 376, 643, 675, 862, 871, 1064
BstMWI GCNNNNNNNGC 2 cut(s) 1024, 1107
BstNI CCWGG 2 cut(s) 228, 580
BstNSI RCATGY 1 cut(s) 1082
BstSCI CCNGG 2 cut(s) 226, 578
BstV1I GCAGC 1 cut(s) 77
BstV2I GAAGAC 3 cut(s) 110, 558, 1113
BstX2I RGATCY 4 cut(s) 376, 643, 675, 862
BstYI RGATCY 4 cut(s) 376, 643, 675, 862
BsuI GTATCC 1 cut(s) 896
BsuRI GGCC 1 cut(s) 578
BtgI CCRYGG 1 cut(s) 718
BtsCI GGATG 3 cut(s) 58, 433, 850
BtsIMutI CAGTG 1 cut(s) 1152
Cac8I GCNNGC 2 cut(s) 12, 1080
CfoI GCGC 1 cut(s) 1103
Cfr10I RCCGGY 1 cut(s) 10
Cfr13I GGNCC 1 cut(s) 1001
CseI GACGC 1 cut(s) 37
Csp6I GTAC 1 cut(s) 127
CviAII CATG 5 cut(s) 76, 574, 683, 960, 1079
CviQI GTAC 1 cut(s) 127
DdeI CTNAG 3 cut(s) 366, 802, 942
DpnI GATC 8 cut(s) 177, 292, 378, 645, 677, 864, 873, 1066
DpnII GATC 8 cut(s) 175, 290, 376, 643, 675, 862, 871, 1064
DrdI GACNNNNNNGTC 1 cut(s) 340
DseDI GACNNNNNNGTC 1 cut(s) 340
EaeI YGGCCR 1 cut(s) 576
Eam1104I CTCTTC 5 cut(s) 314, 319, 444, 793, 1160
EarI CTCTTC 5 cut(s) 314, 319, 444, 793, 1160
EciI GGCGGA 1 cut(s) 948
Eco130I CCWWGG 2 cut(s) 809, 1050
Eco24I GRGCYC 1 cut(s) 1035
Eco31I GGTCTC 2 cut(s) 805, 1088
Eco47I GGWCC 1 cut(s) 1001
Eco57I CTGAAG 5 cut(s) 338, 438, 543, 555, 639
Eco72I CACGTG 1 cut(s) 929
Eco88I CYCGRG 1 cut(s) 1034
EcoRII CCWGG 2 cut(s) 226, 578
EcoT14I CCWWGG 2 cut(s) 809, 1050
EcoT38I GRGCYC 1 cut(s) 1035
ErhI CCWWGG 2 cut(s) 809, 1050
Esp3I CGTCTC 1 cut(s) 1134
FaeI CATG 5 cut(s) 79, 577, 686, 963, 1082
FalI AAGNNNNNCTT 2 cut(s) 531, 563
FatI CATG 5 cut(s) 75, 573, 682, 959, 1078
FblI GTMKAC 1 cut(s) 132
Fnu4HI GCNGC 2 cut(s) 8, 66
FokI GGATG 3 cut(s) 65, 440, 837
FriOI GRGCYC 1 cut(s) 1035
Fsp4HI GCNGC 2 cut(s) 8, 66
FspBI CTAG 2 cut(s) 866, 1091
GlaI GCGC 1 cut(s) 1102
GluI GCNGC 2 cut(s) 8, 66
GsuI CTGGAG 1 cut(s) 632
HaeIII GGCC 1 cut(s) 578
HapII CCGG 2 cut(s) 11, 777
HgaI GACGC 1 cut(s) 37
HhaI GCGC 1 cut(s) 1103
Hin1I GRCGYC 1 cut(s) 29
Hin1II CATG 5 cut(s) 79, 577, 686, 963, 1082
Hin6I GCGC 1 cut(s) 1101
HinP1I GCGC 1 cut(s) 1101
HincII GTYRAC 1 cut(s) 133
HindII GTYRAC 1 cut(s) 133
HindIII AAGCTT 2 cut(s) 167, 771
HinfI GANTC 8 cut(s) 112, 238, 467, 570, 650, 880, 1043, 1155
HpaII CCGG 2 cut(s) 11, 777
HphI GGTGA 7 cut(s) 37, 554, 629, 650, 703, 719, 783
Hpy166II GTNNAC 2 cut(s) 133, 545
Hpy188I TCNGA 6 cut(s) 46, 92, 418, 523, 805, 890
Hpy188III TCNNGA 7 cut(s) 163, 173, 316, 647, 866, 1091, 1152
Hpy8I GTNNAC 2 cut(s) 133, 545
Hpy99I CGWCG 2 cut(s) 134, 137
HpyAV CCTTC 4 cut(s) 518, 533, 911, 1164
HpyCH4III ACNGT 6 cut(s) 25, 126, 307, 342, 719, 1137
HpyCH4IV ACGT 4 cut(s) 129, 192, 928, 1127
HpyCH4V TGCA 3 cut(s) 476, 566, 983
HpyF10VI GCNNNNNNNGC 2 cut(s) 1024, 1107
HpyF3I CTNAG 3 cut(s) 366, 802, 942
HpySE526I ACGT 4 cut(s) 129, 192, 928, 1127
Hsp92I GRCGYC 1 cut(s) 29
Hsp92II CATG 5 cut(s) 79, 577, 686, 963, 1082
HspAI GCGC 1 cut(s) 1101
KroI GCCGGC 1 cut(s) 10
KroNI GCCGGC 1 cut(s) 12
Kzo9I GATC 8 cut(s) 175, 290, 376, 643, 675, 862, 871, 1064
LguI GCTCTTC 1 cut(s) 793
LmnI GCTCC 1 cut(s) 4
Lsp1109I GCAGC 1 cut(s) 77
MaeI CTAG 2 cut(s) 866, 1091
MaeII ACGT 4 cut(s) 129, 192, 928, 1127
MaeIII GTNAC 3 cut(s) 25, 71, 837
MalI GATC 8 cut(s) 177, 292, 378, 645, 677, 864, 873, 1066
MboI GATC 8 cut(s) 175, 290, 376, 643, 675, 862, 871, 1064
MflI RGATCY 4 cut(s) 376, 643, 675, 862
MhlI GDGCHC 1 cut(s) 1035
MlsI TGGCCA 1 cut(s) 578
MluCI AATT 3 cut(s) 274, 348, 825
MluNI TGGCCA 1 cut(s) 578
MmeI TCCRAC 1 cut(s) 913
Mox20I TGGCCA 1 cut(s) 578
MreI CGCCGGCG 1 cut(s) 10
MroNI GCCGGC 1 cut(s) 10
MroXI GAANNNNTTC 1 cut(s) 378
MscI TGGCCA 1 cut(s) 578
MseI TTAA 1 cut(s) 360
MslI CAYNNNNRTG 1 cut(s) 495
Msp20I TGGCCA 1 cut(s) 578
MspA1I CMGCKG 1 cut(s) 877
MspI CCGG 2 cut(s) 11, 777
MspR9I CCNGG 2 cut(s) 228, 580
Mva1269I GAATGC 1 cut(s) 985
MvaI CCWGG 2 cut(s) 228, 580
MwoI GCNNNNNNNGC 2 cut(s) 1024, 1107
NaeI GCCGGC 1 cut(s) 12
NdeII GATC 8 cut(s) 175, 290, 376, 643, 675, 862, 871, 1064
NgoMIV GCCGGC 1 cut(s) 10
NlaIII CATG 5 cut(s) 79, 577, 686, 963, 1082
NlaIV GGNNCC 3 cut(s) 6, 201, 937
NmuCI GTSAC 1 cut(s) 25
NspI RCATGY 1 cut(s) 1082
NspV TTCGAA 2 cut(s) 58, 973
PaeI GCATGC 1 cut(s) 1082
PciSI GCTCTTC 1 cut(s) 793
PcsI WCGNNNNNNNCGW 3 cut(s) 29, 138, 1133
PctI GAATGC 1 cut(s) 985
PdiI GCCGGC 1 cut(s) 12
PdmI GAANNNNTTC 1 cut(s) 378
PfeI GAWTC 8 cut(s) 112, 238, 467, 570, 650, 880, 1043, 1155
PkrI GCNGC 2 cut(s) 9, 67
PmaCI CACGTG 1 cut(s) 929
PmlI CACGTG 1 cut(s) 929
Ppu21I YACGTR 1 cut(s) 929
Psp1406I AACGTT 1 cut(s) 192
Psp6I CCWGG 2 cut(s) 226, 578
PspCI CACGTG 1 cut(s) 929
PspGI CCWGG 2 cut(s) 226, 578
PspN4I GGNNCC 3 cut(s) 6, 201, 937
PspPI GGNCC 1 cut(s) 1001
PsuI RGATCY 4 cut(s) 376, 643, 675, 862
RsaI GTAC 1 cut(s) 128
RsaNI GTAC 1 cut(s) 127
RseI CAYNNNNRTG 1 cut(s) 495
SalI GTCGAC 1 cut(s) 131
SapI GCTCTTC 1 cut(s) 793
SaqAI TTAA 1 cut(s) 360
SatI GCNGC 2 cut(s) 8, 66
Sau3AI GATC 8 cut(s) 175, 290, 376, 643, 675, 862, 871, 1064
Sau96I GGNCC 1 cut(s) 1001
ScrFI CCNGG 2 cut(s) 228, 580
SduI GDGCHC 1 cut(s) 1035
SfuI TTCGAA 2 cut(s) 58, 973
SgrAI CRCCGGYG 1 cut(s) 10
SgrDI CGTCGACG 1 cut(s) 131
SinI GGWCC 1 cut(s) 1001
SmiMI CAYNNNNRTG 1 cut(s) 495
SphI GCATGC 1 cut(s) 1082
Sse9I AATT 3 cut(s) 274, 348, 825
SsiI CCGC 4 cut(s) 8, 425, 875, 933
SspMI CTAG 2 cut(s) 866, 1091
StyD4I CCNGG 2 cut(s) 226, 578
StyI CCWWGG 2 cut(s) 809, 1050
TaaI ACNGT 6 cut(s) 25, 126, 307, 342, 719, 1137
TaiI ACGT 4 cut(s) 132, 195, 931, 1130
TaqI TCGA 7 cut(s) 58, 132, 232, 296, 816, 973, 1151
TasI AATT 3 cut(s) 274, 348, 825
TauI GCSGC 1 cut(s) 10
TfiI GAWTC 8 cut(s) 112, 238, 467, 570, 650, 880, 1043, 1155
Tru1I TTAA 1 cut(s) 360
Tru9I TTAA 1 cut(s) 360
TscAI CASTG 1 cut(s) 1152
TseFI GTSAC 1 cut(s) 25
TseI GCWGC 1 cut(s) 65
Tsp45I GTSAC 1 cut(s) 25
TspDTI ATGAA 5 cut(s) 125, 173, 341, 384, 603
TspGWI ACGGA 1 cut(s) 401
TspRI CASTG 1 cut(s) 1152
VpaK11BI GGWCC 1 cut(s) 1001
XapI RAATTY 1 cut(s) 348
XbaI TCTAGA 2 cut(s) 865, 1090
XceI RCATGY 1 cut(s) 1082
XcmI CCANNNNNNNNNTGG 1 cut(s) 253
XmiI GTMKAC 1 cut(s) 132
XmnI GAANNNNTTC 1 cut(s) 378
XspI CTAG 2 cut(s) 866, 1091
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.