Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003901

Physical Location & Seq

Genomic Coordinates Forward (+)

3161832 .. 3165616

Gene Structure 3785 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G09770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2535 bp

ATGAGGATTATGATTAAGGGAGGTGTTTGGAAGAACACCGAAGATGAGATTCTCAAAGCCGCCGTGATGAAGTATGGTAAGAACCAATGGGCTCGGATCTCGTCTCTTCTCGTTCGTAAGTCTGCTAAACAGTGTAAAGCTCGCTGGTACGAGTGGCTCGATCCATCTATCAAAAAGACTGAATGGACCAGAGAAGAAGATGAGAAGCTTCTACATCTTGCTAAACTTCTGCCTACTCAATGGAGAACTATTGCTCCTATTGTGGGTCGTACACCATCTCAATGTCTTGAGAGGTATGAGAAGCTCCTTGATGCAGCATGCACTAAGGATGAAAATTATGATGCAGCGGATGATCCACGAAAATTACGTCCTGGTGAGATTGATCCGAACCCAGAAGCAAAGCCTGCTCGTCCTGATCCGGTAGACATGGACGAAGATGAGAAAGAAATGCTTTCTGAAGCAAGAGCTAGATTGGCTAACACGAGGGGAAAGAAGGCTAAAAGAAAAGCTAGAGAAAAACAACTTGAGGAAGCTAGAAGGCTTGCTTCTCTGCAAAAAAGAAGAGAACTAAAAGCAGCTGGGATTGATGGAAGGCATAGGAAAAGAAAGAGAAAGGGAATCGACTATAATGCAGAAATTCCTTTTGAAAAGAGGGCACCTGCGGGATTTTATGATACTGCGGATGAAGATCGTCCTGCTGATCAAGTAAAATTTCCAACTACCATTGAAGAACTTGAAGGAAAAAGAAGAGCTGATGTAGAAGCACATTTACGCAAACAAGATGTTGCAAGGAATAAAATTGCTCAGAGACAGGATGCTCCAGCAGCTATATTGCAAGCAAACAAGCTGAATGATCCGGAAGTTGTTAGGAAGAGGTCAAAGCTGATGTTACCACCACCGCAGATTTCAGACCACGAGCTAGAAGAAATTGCTAAGATGGGCTATGCCAGTGACCTTCTTGCCGAGAATGAGGAGCTAACAGAAGGCAGTGCTGCTACTCGTGCACTTTTGGCAAATTACTCACAAACACCAAGGCAAGGAATGACACCCATGAGGACACCTCAAAGAACTCCTGCTGGTAAAGGTGATGCTATTATGATGGAAGCAGAAAACCTGGCCAGATTAAGAGACTCTCAGACACCTTTGCTAGGAGGAGAAAATCCTGAGTTGCACCCTTCTGACTTCACTGGGGTCACTCCGAGAAAGAAGGAGATTCAAACGCCTAATCCAATGTTGACCCCTTCAATGACTCCTGGTGGTGCTGGTCTTACTCCAAGAATTGGCTTGACGCCATCAAGGGATGGGTCTTCTTTTTCTATGACACCCAAAGGGACTCCCTTCAGGGATGAACTTCACATTAACGAAGACATGGACATGCACGAAAGTGCAAAACTTGAGAGGCAGAGACGAGAGGAAGCTAGAAGGAGTTTACGCTCTGGTTTGACTGGGCTTCCTCAGCCAAAGAACGAGTACCAAATAGTTGCACAACCTCCTCCTGAGGAAAGTGAAGAGCCAGAAGAGAAAATTGAGGAAGACATGTCAGACAGGATAGCGAGGGAAAAGGCGGAGGAAGAAGCAAGACAACAGGCATTGCTTAAGAAGAGATCCAAGGTCTTGCAGAGAGATCTTCCTAGACCCCCAGCTGCTTCATTGGCAGTAATTAGGAACTCGTTGCTTTCAGCTGATGGAGACAAAAGTTCTGTTGTTCCTCCTACTCCGATTGAGGTTGCAGATAAAATGGTAAGAGAGGAGCTTCTACAGTTGCTGGAGCATGATAATGCAAAGTATCCGCTTGATGACAAAGCTGAGAAGAAGAAAGGAGCCAAGAACCGTACCAACCGTTCTGCTTCTCAAGTTCTTGCAATTGACGATTTTGATGAAAATGAGCTCCAAGAGGCTGACAAAATGATAAAGGAGGAGGGGAAGTTTCTGTGTGTGTCAATGGGACATGAGAACAAGACACTTGATGATTTTGTAGAAGCTCACAACACATGCGTGAATGATCTCATGTATTTCCCCACTCGAAGCGCTTACGAGCTCTCAAGTGTTGCTGGGAACGCGGACAAAGTTGCAGCTTTTCAGGAGGAGATGGAGAATGTGAGAAAAAAGATGGAGGAGGATGAGAAGAAGGCAGAACACATGAAGGCCAAGTACAAAACTTATACAAAGGGTCATGAGAGGAGGGCAGAGACCGTGTGGACCCAAATAGAGGCGACATTGAAGCAGGCTGAGATTGGTGGAACAGAAGTAGAGTGCTTTAAAGCATTGAAGAGGCAAGAAGAGATGGCTGCATCTTTTAGGAAAAAGAATTTGCAAGAGGAAGTGATAAAGCAAAAGGAAACAGAGAGTAAACTGCAGACTCGCTATGGGAATATGTTGGCAATGGTTGAAAAAGCAGAGGAGATAATGGTCGGTTTCCGAGCACAGGCATTGAAGAAACAAGAGGATGTTGAAGATTCTCACAAACTGAAAGAAGCTAAGCTAGCCACTGGAGAGGAAGAGGACATAGCCATAGCCATGGAAGCTTCTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006357 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009870 GO:0009889 GO:0009987 GO:0010204 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0030154 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0032502 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044444 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

Myb_Cef Myb_DNA-binding

Protein Analysis

844

Amino Acids

95.77

Weight (kDa)

6.37

Isoelectric Point (pI)

55.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	8 - 53	3.8e-13	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	10 - 70	7.3e-14	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	59 - 103	2.8e-10	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	62 - 113	3.4e-09	Myb-like DNA-binding domain
Myb_Cef	PF11831	407 - 655	3.5e-61	pre-mRNA splicing factor component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003901)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09770
fragaria_vesca	FvH4_3g19200 FvH4_3g19210 FvH4_6g01950
malus_domestica	MD04G1229500.v1.1 MD12G1246400.v1.1
prunus_persica	Prupe.6G349400_v2.0.a1
pyrus_communis	pycom04g20330 pycom04g20340 pycom12g22600
rosa_chinensis	RchiOBHm_Chr3g0449801 RchiOBHm_Chr5g0032281
rosa_laevigata	RLG00000025799 RLG00000033377
rosa_multiflora	Rmu_co8441867.1_g000001 Rmu_sc0000610.1_g000011 Rmu_sc0013983.1_g000008 Rmu_ssc0000013.1_g000001
rosa_roxburghii	Rroxscaffold_1G00048170 Rroxscaffold_1G00048180 Rroxscaffold_6G00427620
rosa_rugosa	Rorug02G0623400 Rorug02G0623400 Rorug05G0130300
rosa_samantha	Rh3AG021600 Rh3BG022300 Rh3CG020900 Rh3DG022000 Rh5BG224900 Rh5CG250300 Rh5DG229500 Rh5DG229600
rosa_wichuraiana	Rw3G001770 Rw5G020450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	667
Acc36I	ACCTGC	1 cut(s)	667
AccB1I	GGYRCC	1 cut(s)	655
AccB7I	CCANNNNNTGG	1 cut(s)	1280
AccI	GTMKAC	1 cut(s)	423
AccII	CGCG	1 cut(s)	2060
AccIII	TCCGGA	1 cut(s)	856
AciI	CCGC	8 cut(s)	60, 347, 662, 680, 899, 1565, 1790, 2060
AclWI	GGATC	7 cut(s)	104, 155, 347, 377, 410, 848, 1599
AcoI	YGGCCR	1 cut(s)	1116
AcsI	RAATTY	3 cut(s)	636, 710, 2308
AcuI	CTGAAG	2 cut(s)	477, 1324
AcyI	GRCGYC	1 cut(s)	1289
AfaI	GTAC	5 cut(s)	149, 271, 1472, 1834, 2153
AfeI	AGCGCT	1 cut(s)	2029
AfiI	CCNNNNNNNGG	6 cut(s)	263, 1037, 1148, 1280, 2209, 2425
AflII	CTTAAG	1 cut(s)	1595
AflIII	ACRYGT	1 cut(s)	1536
AjnI	CCWGG	3 cut(s)	370, 1113, 1252
AleI	CACNNNNGTG	2 cut(s)	1383, 1994
AloI	GAACNNNNNNTCC	2 cut(s)	238, 270
Alw21I	GWGCWC	4 cut(s)	1006, 1890, 2040, 2425
Alw26I	GTCTC	6 cut(s)	108, 802, 1122, 1399, 1683, 2183
Alw44I	GTGCAC	1 cut(s)	1002
AlwI	GGATC	7 cut(s)	104, 155, 347, 377, 410, 848, 1599
AlwNI	CAGNNNCTG	1 cut(s)	1765
Aor13HI	TCCGGA	1 cut(s)	856
Aor51HI	AGCGCT	1 cut(s)	2029
AoxI	GGCC	2 cut(s)	1116, 2145
ApaLI	GTGCAC	1 cut(s)	1002
ApeKI	GCWGC	8 cut(s)	314, 344, 575, 824, 992, 1643, 2072, 2288
ApoI	RAATTY	3 cut(s)	636, 710, 2308
ArsI	GACNNNNNNTTYG	2 cut(s)	352, 384
AspLEI	GCGC	1 cut(s)	2030
AspS9I	GGNCC	2 cut(s)	186, 2199
AsuHPI	GGTGA	2 cut(s)	386, 1097
AsuNHI	GCTAGC	1 cut(s)	2482
AvaII	GGWCC	2 cut(s)	186, 2199
AxyI	CCTNAGG	1 cut(s)	1497
BaeGI	GKGCMC	2 cut(s)	658, 1006
BalI	TGGCCA	1 cut(s)	1118
BanI	GGYRCC	1 cut(s)	655
BanII	GRGCYC	3 cut(s)	94, 1890, 2040
BarI	GAAGNNNNNNTAC	4 cut(s)	753, 785, 2135, 2167
BauI	CACGAG	3 cut(s)	481, 914, 999
BbsI	GAAGAC	3 cut(s)	1299, 1371, 1539
Bbv12I	GWGCWC	4 cut(s)	1006, 1890, 2040, 2425
BbvCI	CCTCAGC	1 cut(s)	1455
BbvI	GCAGC	8 cut(s)	326, 356, 587, 836, 979, 1630, 2084, 2275
BceAI	ACGGC	1 cut(s)	47
BcgI	CGANNNNNNTGC	2 cut(s)	611, 645
BciT130I	CCWGG	3 cut(s)	372, 1115, 1254
BciVI	GTATCC	1 cut(s)	1797
BclI	TGATCA	1 cut(s)	700
BcoDI	GTCTC	6 cut(s)	108, 802, 1122, 1399, 1683, 2183
BfaI	CTAG	8 cut(s)	468, 510, 534, 920, 1148, 1419, 1632, 2483
BfmI	CTRYAG	2 cut(s)	1757, 2354
BfoI	RGCGCY	1 cut(s)	2031
BfrI	CTTAAG	1 cut(s)	1595
BfuAI	ACCTGC	1 cut(s)	667
BfuI	GTATCC	1 cut(s)	1797
BglII	AGATCT	1 cut(s)	1624
BisI	GCNGC	9 cut(s)	60, 315, 345, 576, 825, 993, 1644, 2073, 2289
BlpI	GCTNAGC	1 cut(s)	2478
BlsI	GCNGC	9 cut(s)	61, 316, 346, 577, 826, 994, 1645, 2074, 2290
Bme1390I	CCNGG	3 cut(s)	372, 1115, 1254
Bme18I	GGWCC	2 cut(s)	186, 2199
BmgT120I	GGNCC	2 cut(s)	186, 2199
BmiI	GGNNCC	3 cut(s)	657, 1822, 2201
BmrFI	CCNGG	3 cut(s)	372, 1115, 1254
BmrI	ACTGGG	2 cut(s)	1197, 1455
BmsI	GCATC	5 cut(s)	301, 331, 805, 1078, 2300
BmtI	GCTAGC	1 cut(s)	2486
BmuI	ACTGGG	2 cut(s)	1197, 1455
BpiI	GAAGAC	3 cut(s)	1299, 1371, 1539
BplI	GAGNNNNNCTC	2 cut(s)	1045, 1077
BpmI	CTGGAG	3 cut(s)	804, 1787, 2511
Bpu10I	CCTNAGC	1 cut(s)	1455
Bpu1102I	GCTNAGC	1 cut(s)	2478
BpuEI	CTTGAG	5 cut(s)	308, 545, 1415, 1836, 2026
BsaBI	GATNNNNATC	1 cut(s)	687
BsaHI	GRCGYC	1 cut(s)	1289
BsaI	GGTCTC	1 cut(s)	2183
BsaJI	CCNNGG	3 cut(s)	1031, 1608, 2517
BsaWI	WCCGGW	2 cut(s)	418, 856
BsaXI	ACNNNNNCTCC	4 cut(s)	238, 268, 1910, 1940
Bsc4I	CCNNNNNNNGG	6 cut(s)	263, 1037, 1148, 1280, 2209, 2425
Bse1I	ACTGG	4 cut(s)	948, 1192, 1450, 2494
Bse21I	CCTNAGG	1 cut(s)	1497
Bse3DI	GCAATG	2 cut(s)	1589, 2388
Bse8I	GATNNNNATC	1 cut(s)	687
BseAI	TCCGGA	1 cut(s)	856
BseBI	CCWGG	3 cut(s)	372, 1115, 1254
BseDI	CCNNGG	3 cut(s)	1031, 1608, 2517
BseGI	GGATG	8 cut(s)	334, 355, 688, 820, 1306, 1351, 2125, 2452
BseJI	GATNNNNATC	1 cut(s)	687
BseLI	CCNNNNNNNGG	6 cut(s)	263, 1037, 1148, 1280, 2209, 2425
BseMI	GCAATG	2 cut(s)	1589, 2388
BseMII	CTCAG	7 cut(s)	818, 1148, 1155, 1469, 1488, 1797, 2220
BseNI	ACTGG	4 cut(s)	948, 1192, 1450, 2494
BseRI	GAGGAG	9 cut(s)	986, 1167, 1482, 1763, 1931, 2099, 2129, 2194, 2414
BseSI	GKGCMC	2 cut(s)	658, 1006
BseXI	GCAGC	8 cut(s)	326, 356, 587, 836, 979, 1630, 2084, 2275
BseYI	CCCAGC	3 cut(s)	578, 1639, 2051
Bsh1236I	CGCG	1 cut(s)	2060
BshFI	GGCC	2 cut(s)	1118, 2147
BshNI	GGYRCC	1 cut(s)	655
BsiHKAI	GWGCWC	4 cut(s)	1006, 1890, 2040, 2425
BsiSI	CCGG	2 cut(s)	419, 857
BslFI	GGGAC	2 cut(s)	1345, 1959
BslI	CCNNNNNNNGG	6 cut(s)	263, 1037, 1148, 1280, 2209, 2425
BsmAI	GTCTC	6 cut(s)	108, 802, 1122, 1399, 1683, 2183
BsmBI	CGTCTC	2 cut(s)	108, 1399
BsmFI	GGGAC	2 cut(s)	1345, 1959
BsnI	GGCC	2 cut(s)	1118, 2147
Bso31I	GGTCTC	1 cut(s)	2183
Bsp1286I	GDGCHC	6 cut(s)	94, 658, 1006, 1890, 2040, 2425
Bsp13I	TCCGGA	1 cut(s)	856
Bsp1720I	GCTNAGC	1 cut(s)	2478
Bsp19I	CCATGG	1 cut(s)	2517
BspACI	CCGC	8 cut(s)	60, 347, 662, 680, 899, 1565, 1790, 2060
BspANI	GGCC	2 cut(s)	1118, 2147
BspCNI	CTCAG	7 cut(s)	817, 1147, 1156, 1468, 1489, 1798, 2221
BspEI	TCCGGA	1 cut(s)	856
BspFNI	CGCG	1 cut(s)	2060
BspHI	TCATGA	1 cut(s)	2173
BspLI	GGNNCC	3 cut(s)	657, 1822, 2201
BspMAI	CTGCAG	1 cut(s)	2358
BspMI	ACCTGC	1 cut(s)	667
BspOI	GCTAGC	1 cut(s)	2486
BspPI	GGATC	7 cut(s)	104, 155, 347, 377, 410, 848, 1599
BspQI	GCTCTTC	2 cut(s)	742, 1503
BspT107I	GGYRCC	1 cut(s)	655
BspTI	CTTAAG	1 cut(s)	1595
BspTNI	GGTCTC	1 cut(s)	2183
BsrDI	GCAATG	2 cut(s)	1589, 2388
BsrI	ACTGG	4 cut(s)	948, 1192, 1450, 2494
BssECI	CCNNGG	3 cut(s)	1031, 1608, 2517
BssNI	GRCGYC	1 cut(s)	1289
BssSI	CACGAG	3 cut(s)	481, 914, 999
BssT1I	CCWWGG	3 cut(s)	1031, 1608, 2517
Bst2BI	CACGAG	3 cut(s)	481, 914, 999
Bst2UI	CCWGG	3 cut(s)	372, 1115, 1254
Bst4CI	ACNGT	5 cut(s)	132, 1761, 1832, 1841, 2194
BstACI	GRCGYC	1 cut(s)	1289
BstAFI	CTTAAG	1 cut(s)	1595
BstAPI	GCANNNNNTGC	1 cut(s)	404
BstC8I	GCNNGC	7 cut(s)	142, 319, 405, 543, 837, 2226, 2484
BstDSI	CCRYGG	1 cut(s)	2517
BstENI	CCTNNNNNAGG	1 cut(s)	1146
BstF5I	GGATG	8 cut(s)	334, 355, 688, 820, 1306, 1351, 2125, 2452
BstFNI	CGCG	1 cut(s)	2060
BstH2I	RGCGCY	1 cut(s)	2031
BstHHI	GCGC	1 cut(s)	2030
BstMAI	GTCTC	6 cut(s)	108, 802, 1122, 1399, 1683, 2183
BstNI	CCWGG	3 cut(s)	372, 1115, 1254
BstNSI	RCATGY	4 cut(s)	321, 1378, 1540, 1995
BstSCI	CCNGG	3 cut(s)	370, 1113, 1252
BstSFI	CTRYAG	2 cut(s)	1757, 2354
BstSLI	GKGCMC	2 cut(s)	658, 1006
BstUI	CGCG	1 cut(s)	2060
BstV1I	GCAGC	8 cut(s)	326, 356, 587, 836, 979, 1630, 2084, 2275
BstV2I	GAAGAC	3 cut(s)	1299, 1371, 1539
BstX2I	RGATCY	3 cut(s)	96, 1604, 1624
BstXI	CCANNNNNNTGG	1 cut(s)	2518
BstYI	RGATCY	3 cut(s)	96, 1604, 1624
Bsu36I	CCTNAGG	1 cut(s)	1497
BsuI	GTATCC	1 cut(s)	1797
BsuRI	GGCC	2 cut(s)	1118, 2147
BtgI	CCRYGG	1 cut(s)	2517
BtsCI	GGATG	8 cut(s)	334, 355, 688, 820, 1306, 1351, 2125, 2452
BtsI	GCAGTG	1 cut(s)	994
BtsIMutI	CAGTG	5 cut(s)	137, 955, 994, 1185, 2487
BveI	ACCTGC	1 cut(s)	667
Cac8I	GCNNGC	7 cut(s)	142, 319, 405, 543, 837, 2226, 2484
CaiI	CAGNNNCTG	1 cut(s)	1765
CciI	TCATGA	1 cut(s)	2173
CfoI	GCGC	1 cut(s)	2030
Cfr13I	GGNCC	2 cut(s)	186, 2199
CseI	GACGC	1 cut(s)	1297
Csp6I	GTAC	5 cut(s)	148, 270, 1471, 1833, 2152
CviQI	GTAC	5 cut(s)	148, 270, 1471, 1833, 2152
DraI	TTTAAA	1 cut(s)	2260
EaeI	YGGCCR	1 cut(s)	1116
EciI	GGCGGA	1 cut(s)	1580
Ecl136II	GAGCTC	2 cut(s)	1888, 2038
Eco130I	CCWWGG	3 cut(s)	1031, 1608, 2517
Eco24I	GRGCYC	3 cut(s)	94, 1890, 2040
Eco31I	GGTCTC	1 cut(s)	2183
Eco47I	GGWCC	2 cut(s)	186, 2199
Eco47III	AGCGCT	1 cut(s)	2029
Eco53kI	GAGCTC	2 cut(s)	1888, 2038
Eco57I	CTGAAG	2 cut(s)	477, 1324
Eco81I	CCTNAGG	1 cut(s)	1497
EcoICRI	GAGCTC	2 cut(s)	1888, 2038
EcoNI	CCTNNNNNAGG	1 cut(s)	1146
EcoRII	CCWGG	3 cut(s)	370, 1113, 1252
EcoT14I	CCWWGG	3 cut(s)	1031, 1608, 2517
EcoT38I	GRGCYC	3 cut(s)	94, 1890, 2040
ErhI	CCWWGG	3 cut(s)	1031, 1608, 2517
Esp3I	CGTCTC	2 cut(s)	108, 1399
FalI	AAGNNNNNCTT	4 cut(s)	435, 467, 529, 561
FaqI	GGGAC	2 cut(s)	1345, 1959
FauI	CCCGC	1 cut(s)	655
FbaI	TGATCA	1 cut(s)	700
FblI	GTMKAC	1 cut(s)	423
Fnu4HI	GCNGC	9 cut(s)	60, 315, 345, 576, 825, 993, 1644, 2073, 2289
FokI	GGATG	8 cut(s)	341, 362, 695, 827, 1313, 1358, 2132, 2459
FriOI	GRGCYC	3 cut(s)	94, 1890, 2040
Fsp4HI	GCNGC	9 cut(s)	60, 315, 345, 576, 825, 993, 1644, 2073, 2289
FspBI	CTAG	8 cut(s)	468, 510, 534, 920, 1148, 1419, 1632, 2483
GlaI	GCGC	1 cut(s)	2029
GluI	GCNGC	9 cut(s)	60, 315, 345, 576, 825, 993, 1644, 2073, 2289
GsaI	CCCAGC	3 cut(s)	582, 1643, 2055
GsuI	CTGGAG	3 cut(s)	804, 1787, 2511
HaeII	RGCGCY	1 cut(s)	2031
HaeIII	GGCC	2 cut(s)	1118, 2147
HapII	CCGG	2 cut(s)	419, 857
HgaI	GACGC	1 cut(s)	1297
HhaI	GCGC	1 cut(s)	2030
Hin1I	GRCGYC	1 cut(s)	1289
Hin6I	GCGC	1 cut(s)	2028
HinP1I	GCGC	1 cut(s)	2028
HincII	GTYRAC	1 cut(s)	1236
HindII	GTYRAC	1 cut(s)	1236
HindIII	AAGCTT	2 cut(s)	206, 2523
HinfI	GANTC	8 cut(s)	49, 618, 1130, 1213, 1249, 1333, 2359, 2456
HpaII	CCGG	2 cut(s)	419, 857
HphI	GGTGA	2 cut(s)	386, 1097
Hpy166II	GTNNAC	7 cut(s)	272, 424, 1004, 1236, 1430, 2199, 2351
Hpy188III	TCNNGA	7 cut(s)	287, 413, 857, 1163, 1496, 2081, 2174
Hpy8I	GTNNAC	7 cut(s)	272, 424, 1004, 1236, 1430, 2199, 2351
HpyCH4III	ACNGT	5 cut(s)	132, 1761, 1832, 1841, 2194
HpyCH4IV	ACGT	1 cut(s)	367
HpySE526I	ACGT	1 cut(s)	367
Hsp92I	GRCGYC	1 cut(s)	1289
HspAI	GCGC	1 cut(s)	2028
Kpn2I	TCCGGA	1 cut(s)	856
Ksp22I	TGATCA	1 cut(s)	700
LguI	GCTCTTC	2 cut(s)	742, 1503
LmnI	GCTCC	8 cut(s)	259, 309, 823, 973, 1750, 1768, 1820, 1893
Lsp1109I	GCAGC	8 cut(s)	326, 356, 587, 836, 979, 1630, 2084, 2275
LweI	GCATC	5 cut(s)	301, 331, 805, 1078, 2300
MaeI	CTAG	8 cut(s)	468, 510, 534, 920, 1148, 1419, 1632, 2483
MaeII	ACGT	1 cut(s)	367
MaeIII	GTNAC	3 cut(s)	888, 950, 1192
MfeI	CAATTG	1 cut(s)	1863
MflI	RGATCY	3 cut(s)	96, 1604, 1624
MhlI	GDGCHC	6 cut(s)	94, 658, 1006, 1890, 2040, 2425
MlsI	TGGCCA	1 cut(s)	1118
MluNI	TGGCCA	1 cut(s)	1118
MlyI	GAGTC	4 cut(s)	1124, 1243, 1327, 2353
MmeI	TCCRAC	1 cut(s)	740
Mox20I	TGGCCA	1 cut(s)	1118
MroI	TCCGGA	1 cut(s)	856
MscI	TGGCCA	1 cut(s)	1118
MseI	TTAA	5 cut(s)	15, 1124, 1359, 1596, 2259
MslI	CAYNNNNRTG	6 cut(s)	280, 1373, 1383, 1776, 1994, 2516
Msp20I	TGGCCA	1 cut(s)	1118
MspA1I	CMGCKG	4 cut(s)	347, 578, 1643, 1682
MspCI	CTTAAG	1 cut(s)	1595
MspI	CCGG	2 cut(s)	419, 857
MspR9I	CCNGG	3 cut(s)	372, 1115, 1254
MunI	CAATTG	1 cut(s)	1863
MvaI	CCWGG	3 cut(s)	372, 1115, 1254
MvnI	CGCG	1 cut(s)	2060
NcoI	CCATGG	1 cut(s)	2517
NheI	GCTAGC	1 cut(s)	2482
NlaIV	GGNNCC	3 cut(s)	657, 1822, 2201
NmeAIII	GCCGAG	1 cut(s)	988
NmuCI	GTSAC	2 cut(s)	950, 1192
NspI	RCATGY	4 cut(s)	321, 1378, 1540, 1995
OliI	CACNNNNGTG	2 cut(s)	1383, 1994
PaeI	GCATGC	1 cut(s)	321
PagI	TCATGA	1 cut(s)	2173
PaqCI	CACCTGC	1 cut(s)	667
PciI	ACATGT	1 cut(s)	1536
PciSI	GCTCTTC	2 cut(s)	742, 1503
PcsI	WCGNNNNNNNCGW	2 cut(s)	156, 364
PfeI	GAWTC	4 cut(s)	49, 618, 1213, 2456
PflMI	CCANNNNNTGG	1 cut(s)	1280
PkrI	GCNGC	9 cut(s)	61, 316, 346, 577, 826, 994, 1645, 2074, 2290
PleI	GAGTC	4 cut(s)	1124, 1243, 1327, 2353
PpsI	GAGTC	4 cut(s)	1124, 1243, 1327, 2353
PscI	ACATGT	1 cut(s)	1536
Psp124BI	GAGCTC	2 cut(s)	1890, 2040
Psp6I	CCWGG	3 cut(s)	370, 1113, 1252
PspFI	CCCAGC	3 cut(s)	578, 1639, 2051
PspGI	CCWGG	3 cut(s)	370, 1113, 1252
PspN4I	GGNNCC	3 cut(s)	657, 1822, 2201
PspPI	GGNCC	2 cut(s)	186, 2199
PsrI	GAACNNNNNNTAC	2 cut(s)	1825, 1857
PstI	CTGCAG	1 cut(s)	2358
PstNI	CAGNNNCTG	1 cut(s)	1765
PsuI	RGATCY	3 cut(s)	96, 1604, 1624
PvuII	CAGCTG	3 cut(s)	578, 1643, 1682
RsaI	GTAC	5 cut(s)	149, 271, 1472, 1834, 2153
RsaNI	GTAC	5 cut(s)	148, 270, 1471, 1833, 2152
RseI	CAYNNNNRTG	6 cut(s)	280, 1373, 1383, 1776, 1994, 2516
SacI	GAGCTC	2 cut(s)	1890, 2040
SapI	GCTCTTC	2 cut(s)	742, 1503
SaqAI	TTAA	5 cut(s)	15, 1124, 1359, 1596, 2259
SatI	GCNGC	9 cut(s)	60, 315, 345, 576, 825, 993, 1644, 2073, 2289
Sau96I	GGNCC	2 cut(s)	186, 2199
SchI	GAGTC	4 cut(s)	1124, 1243, 1327, 2353
ScrFI	CCNGG	3 cut(s)	372, 1115, 1254
SduI	GDGCHC	6 cut(s)	94, 658, 1006, 1890, 2040, 2425
SfaNI	GCATC	5 cut(s)	301, 331, 805, 1078, 2300
SfcI	CTRYAG	2 cut(s)	1757, 2354
SinI	GGWCC	2 cut(s)	186, 2199
SmiMI	CAYNNNNRTG	6 cut(s)	280, 1373, 1383, 1776, 1994, 2516
SmlI	CTYRAG	6 cut(s)	287, 524, 1394, 1595, 1851, 2041
SmoI	CTYRAG	6 cut(s)	287, 524, 1394, 1595, 1851, 2041
SphI	GCATGC	1 cut(s)	321
SsiI	CCGC	8 cut(s)	60, 347, 662, 680, 899, 1565, 1790, 2060
SspMI	CTAG	8 cut(s)	468, 510, 534, 920, 1148, 1419, 1632, 2483
SstI	GAGCTC	2 cut(s)	1890, 2040
StyD4I	CCNGG	3 cut(s)	370, 1113, 1252
StyI	CCWWGG	3 cut(s)	1031, 1608, 2517
TaaI	ACNGT	5 cut(s)	132, 1761, 1832, 1841, 2194
TaiI	ACGT	1 cut(s)	370
TaqI	TCGA	3 cut(s)	159, 621, 2023
TatI	WGTACW	1 cut(s)	2151
TauI	GCSGC	1 cut(s)	62
TfiI	GAWTC	4 cut(s)	49, 618, 1213, 2456
Tru1I	TTAA	5 cut(s)	15, 1124, 1359, 1596, 2259
Tru9I	TTAA	5 cut(s)	15, 1124, 1359, 1596, 2259
TscAI	CASTG	5 cut(s)	137, 955, 994, 1192, 2494
TseFI	GTSAC	2 cut(s)	950, 1192
TseI	GCWGC	8 cut(s)	314, 344, 575, 824, 992, 1643, 2072, 2288
Tsp45I	GTSAC	2 cut(s)	950, 1192
TspDTI	ATGAA	7 cut(s)	83, 345, 699, 1362, 1638, 1893, 2156
TspRI	CASTG	5 cut(s)	137, 955, 994, 1192, 2494
Van91I	CCANNNNNTGG	1 cut(s)	1280
Vha464I	CTTAAG	1 cut(s)	1595
VneI	GTGCAC	1 cut(s)	1002
VpaK11BI	GGWCC	2 cut(s)	186, 2199
XagI	CCTNNNNNAGG	1 cut(s)	1146
XapI	RAATTY	3 cut(s)	636, 710, 2308
XceI	RCATGY	4 cut(s)	321, 1378, 1540, 1995
XmiI	GTMKAC	1 cut(s)	423
XspI	CTAG	8 cut(s)	468, 510, 534, 920, 1148, 1419, 1632, 2483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.