Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0003901

Physical Location & Seq

Genomic Coordinates Reverse (-)

26437875 .. 26440368

Gene Structure 2494 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000033377

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGCCGAACGTCGAACGCCTGACACCGGAAGGGCTGGGTCTAGTGCCGGAGGGGCTAAGCGAACGTGGCAGGGCCTGGATGGAGCGCTGGAGGGACTGGAATGTTGTCGGAGTCGGAGGTACGTTTTCCACCGCAAGGCTAGGGTTTAATCAAAATACTCCACTATTAAACCTAACCCCAGTGTTTTCTAATTTTTCTTGTGATCTAAAGATGAGCAACAAGAAGATGATCCGAGGAGGCCTGTGGAAGAACACCGAGGATGAGATCCTGAAGGTGGCAGTCATGAAACATGGAATCAACGAGTGGGATCGCATCTCAACGCTGTTGAATCGCAAATCCGCAAAGCAGTGTAAGGCTCGCTGGTTCCACTGGCTCGAACCCTCAATCAAGAAGGTCGAGTGGACTCGAGAAGAGGACGAGAAGCTTCTCTATCTTGCAAAGCTCATGCCTTCACAGTGGAGAACAATAGCCGAAAACTTAAGTGGTCGTACTGCATCTCAATGCATTGATAGGTATGAGAAGCTTCTTGATGCAGCTTGTATTGATAATCATGATAACTATGAAGATCCGAGGAGATTGAGGCCAGGAGAGATTGATCCCAACCCCGAGACCAGGCCGGTTCGCCCGGACCCTGTGGACATGGATGAGGATAAGAACGAGATGCTTTCAGAGGCTCGAGCTCGGTTGGCTAACACCAAAGGGAAGAAGGCGAAGAGGAAGGCGAGAGAGGCGCAGCTCGAAGAGGCTAGAAGGGTTGCTTCTCTACAGAAGAGGAGAGAATTAAAGGCTGCAGGGATTGATGATAAGAGTACTAGGAATCAGCAGAAGAGGAAAAGGAATGTAATAGACTACAATGCAGAAATTCCCTTTGAGAAGAAGCCTCCTTTGGGGTTTTATAATGTCGGTGATGAGGATACAGAAGTAGTATTGGAGCAGCATGATCAGTTTCCCTTGACTATTGAGGAGCTTGAAGGGAAAAGAAGGGTTGATGTGGAAGCTGAGCTGAGAAAACAAGATATTGCAAAGAACAAAATTTCCAACAAGTTGAATATTGATGACGTTTCCAATATGGAAACAGTTAGGAAGAGATCAAAACTTATGCTTCCTGCACCGCAGATATCTGACATTGAATTGGAGGAGATTGCTAAGATGAGCAATGCAGGTGATCTTGTTGGTAGTGAGAATGGATTCACAGATGCAAATTATTTCGGGGTTACTCATGAAACTCCTAGATTTGGCTTAACACCATCGAAGGGTACTGTCATTAGGGATGAGCTCCATATCAATGAAGGCATTGATAAAGATGATGGAGCAAAATTGAAGCAACAAAAGCATTCTCAGCAGTTCAGAATAAAGAACTTGCATAAGGGTTTAAGCAATTTGCCAAAGCCCAAAAATGAGTACCAAATAGTTGTGCAACCAATCCCAGAAGATAATGAAGAAGCAGGACATCAGGCATTAGTTACAAAGAAGAGATCAAAAGTACTGAATGTGAGAGCAGATGAGGATAAGCATGGAGTGGTAGCTGTTCTTCCCAGTACAATTGAGCAGGCTGACCAAATGATCAGAAAGGAGCTTCTTAGCTTAAAAGAGCATGATTGTGCAAAGTATCCAATTGATGAGAAAGTGGTAACTACTTTCAAAGAAGATGAACTGAGGGAGGCTGATTCAATGATAGCCAAAGAAGTTCAGTATCCTGGTGAAGCACACAAAAGCTGCAGTCCTGGTTGTTGTCTATCAAGCATTGCTGAAGATGAGAACCCTGTGGCTTGTTTGCACAGTGAATTTGAGAAGGTGCAGAATAAATTCGAGAAGGTGAAGAAGAAGGCACAAATCATTGAGAACAAGGTTAAAGTTCGTACAGATGGTTATGAGAAGCGAGCTAAAGATGTTCTTTGGCCAAAAATAGAGGAAACTTTCAAGCAAATGGACACAGCCACAAAAGAACTTGAGTGCTTCCAAGCTTTACAGAAGCAAGAACAATTAGCAGCAACAAGCCGGATAAATAATATGTGGGAGGAAGTTCAGAAACAAAAGGAGCTCGAGCAAACTCTGCAAAAGAGGTATGGAGATCTTGTAGTGAAGCTGGAAAAAATACAGCACCAATCCAAAGGTTCAGTACCAATAATGCTCTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006357 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009870 GO:0009889 GO:0009987 GO:0010204 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0030154 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0032502 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044444 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

Myb_Cef Myb_DNA-binding

Protein Analysis

713

Amino Acids

81.78

Weight (kDa)

7.87

Isoelectric Point (pI)

50.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	80 - 125	2e-11	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	82 - 142	1.8e-11	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	131 - 176	1e-11	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	134 - 180	4.7e-10	Myb-like DNA-binding domain
Myb_Cef	PF11831	408 - 489	2.7e-14	pre-mRNA splicing factor component
Myb_Cef	PF11831	513 - 565	3.4e-06	pre-mRNA splicing factor component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003901)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09770
fragaria_vesca	FvH4_3g19200 FvH4_3g19210 FvH4_6g01950
malus_domestica	MD04G1229500.v1.1 MD12G1246400.v1.1
prunus_persica	Prupe.6G349400_v2.0.a1
pyrus_communis	pycom04g20330 pycom04g20340 pycom12g22600
rosa_chinensis	RchiOBHm_Chr3g0449801 RchiOBHm_Chr5g0032281
rosa_laevigata	RLG00000025799 RLG00000033377
rosa_multiflora	Rmu_co8441867.1_g000001 Rmu_sc0000610.1_g000011 Rmu_sc0013983.1_g000008 Rmu_ssc0000013.1_g000001
rosa_roxburghii	Rroxscaffold_1G00048170 Rroxscaffold_1G00048180 Rroxscaffold_6G00427620
rosa_rugosa	Rorug02G0623400 Rorug02G0623400 Rorug05G0130300
rosa_samantha	Rh3AG021600 Rh3BG022300 Rh3CG020900 Rh3DG022000 Rh5BG224900 Rh5CG250300 Rh5DG229500 Rh5DG229600
rosa_wichuraiana	Rw3G001770 Rw5G020450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	897
AarI	CACCTGC	1 cut(s)	1151
Acc36I	ACCTGC	1 cut(s)	1151
AciI	CCGC	3 cut(s)	132, 339, 1112
AclWI	GGATC	5 cut(s)	223, 259, 315, 560, 590
AcoI	YGGCCR	1 cut(s)	1898
AcsI	RAATTY	4 cut(s)	861, 1032, 1784, 1805
AcuI	CTGAAG	2 cut(s)	290, 1770
AfaI	GTAC	9 cut(s)	121, 490, 811, 1258, 1403, 1485, 1540, 1861, 2121
AfeI	AGCGCT	1 cut(s)	86
AfiI	CCNNNNNNNGG	7 cut(s)	25, 135, 274, 612, 887, 1235, 1253
AflII	CTTAAG	1 cut(s)	478
AgsI	TTSAA	8 cut(s)	328, 971, 1048, 1130, 1321, 1642, 1671, 1921
AjnI	CCWGG	5 cut(s)	74, 583, 611, 1696, 1723
AjuI	GAANNNNNNNTTGG	2 cut(s)	869, 901
AloI	GAACNNNNNNTCC	2 cut(s)	1019, 1051
Alw21I	GWGCWC	3 cut(s)	682, 1278, 2043
Alw26I	GTCTC	1 cut(s)	602
AlwI	GGATC	5 cut(s)	223, 259, 315, 560, 590
AlwNI	CAGNNNCTG	1 cut(s)	75
Ama87I	CYCGRG	4 cut(s)	405, 605, 675, 2042
Aor51HI	AGCGCT	1 cut(s)	86
AoxI	GGCC	5 cut(s)	72, 238, 581, 614, 1898
ApeKI	GCWGC	6 cut(s)	533, 733, 788, 934, 1716, 1988
ApoI	RAATTY	4 cut(s)	861, 1032, 1784, 1805
Asp700I	GAANNNNTTC	2 cut(s)	1187, 1805
AspLEI	GCGC	2 cut(s)	87, 733
AspS9I	GGNCC	2 cut(s)	72, 628
AsuC2I	CCSGG	1 cut(s)	626
AsuHPI	GGTGA	4 cut(s)	917, 1175, 1712, 1828
AvaI	CYCGRG	4 cut(s)	405, 605, 675, 2042
AvaII	GGWCC	1 cut(s)	628
BaeI	ACNNNNGTAYC	2 cut(s)	906, 939
BalI	TGGCCA	1 cut(s)	1900
BanII	GRGCYC	3 cut(s)	682, 1278, 2043
BarI	GAAGNNNNNNTAC	2 cut(s)	1515, 1547
Bbv12I	GWGCWC	3 cut(s)	682, 1278, 2043
BbvI	GCAGC	6 cut(s)	545, 745, 775, 946, 1703, 2000
BccI	CCATC	4 cut(s)	73, 1255, 1301, 1859
BciT130I	CCWGG	5 cut(s)	76, 585, 613, 1698, 1725
BciVI	GTATCC	3 cut(s)	907, 1620, 1704
BclI	TGATCA	2 cut(s)	940, 1563
BcnI	CCSGG	1 cut(s)	626
BcoDI	GTCTC	1 cut(s)	602
BfaI	CTAG	6 cut(s)	41, 140, 747, 813, 1230, 2137
BfmI	CTRYAG	3 cut(s)	764, 789, 1717
BfoI	RGCGCY	1 cut(s)	88
BfrI	CTTAAG	1 cut(s)	478
BfuAI	ACCTGC	1 cut(s)	1151
BfuI	GTATCC	3 cut(s)	907, 1620, 1704
BglI	GCCNNNNNGGC	1 cut(s)	52
BglII	AGATCT	1 cut(s)	2071
BisI	GCNGC	6 cut(s)	534, 734, 789, 935, 1717, 1989
BlpI	GCTNAGC	2 cut(s)	56, 999
BlsI	GCNGC	6 cut(s)	535, 735, 790, 936, 1718, 1990
BmcAI	AGTACT	2 cut(s)	811, 1485
Bme1390I	CCNGG	6 cut(s)	76, 585, 613, 626, 1698, 1725
Bme18I	GGWCC	1 cut(s)	628
BmeT110I	CYCGRG	4 cut(s)	405, 605, 675, 2042
BmgT120I	GGNCC	2 cut(s)	72, 628
BmiI	GGNNCC	2 cut(s)	365, 630
BmrFI	CCNGG	6 cut(s)	76, 585, 613, 626, 1698, 1725
BmrI	ACTGGG	2 cut(s)	173, 1530
BmsI	GCATC	5 cut(s)	321, 503, 520, 651, 1186
BmuI	ACTGGG	2 cut(s)	173, 1530
BpmI	CTGGAG	1 cut(s)	109
Bpu1102I	GCTNAGC	2 cut(s)	56, 999
BpuEI	CTTGAG	1 cut(s)	1970
BpuMI	CCSGG	1 cut(s)	626
BsaI	GGTCTC	1 cut(s)	602
BsaJI	CCNNGG	3 cut(s)	232, 255, 569
BsaWI	WCCGGW	1 cut(s)	25
BsaXI	ACNNNNNCTCC	2 cut(s)	2061, 2091
Bsc4I	CCNNNNNNNGG	7 cut(s)	25, 135, 274, 612, 887, 1235, 1253
Bse118I	RCCGGY	1 cut(s)	616
Bse1I	ACTGG	4 cut(s)	101, 179, 374, 1536
Bse3DI	GCAATG	2 cut(s)	1162, 1743
BseBI	CCWGG	5 cut(s)	76, 585, 613, 1698, 1725
BseDI	CCNNGG	3 cut(s)	232, 255, 569
BseGI	GGATG	4 cut(s)	84, 265, 649, 1276
BseLI	CCNNNNNNNGG	7 cut(s)	25, 135, 274, 612, 887, 1235, 1253
BseMI	GCAATG	2 cut(s)	1162, 1743
BseMII	CTCAG	4 cut(s)	990, 995, 1352, 1646
BseNI	ACTGG	4 cut(s)	101, 179, 374, 1536
BseRI	GAGGAG	5 cut(s)	249, 586, 787, 977, 1151
BseXI	GCAGC	6 cut(s)	545, 745, 775, 946, 1703, 2000
BseYI	CCCAGC	1 cut(s)	34
BsgI	GTGCAG	2 cut(s)	1092, 1817
BshFI	GGCC	5 cut(s)	74, 240, 583, 616, 1900
BsiHKAI	GWGCWC	3 cut(s)	682, 1278, 2043
BsiHKCI	CYCGRG	4 cut(s)	405, 605, 675, 2042
BsiSI	CCGG	5 cut(s)	26, 47, 617, 626, 1999
BslFI	GGGAC	1 cut(s)	107
BslI	CCNNNNNNNGG	7 cut(s)	25, 135, 274, 612, 887, 1235, 1253
BsmAI	GTCTC	1 cut(s)	602
BsmFI	GGGAC	1 cut(s)	107
BsmI	GAATGC	1 cut(s)	1333
BsnI	GGCC	5 cut(s)	74, 240, 583, 616, 1900
Bso31I	GGTCTC	1 cut(s)	602
BsoBI	CYCGRG	4 cut(s)	405, 605, 675, 2042
Bsp1286I	GDGCHC	3 cut(s)	682, 1278, 2043
Bsp1720I	GCTNAGC	2 cut(s)	56, 999
BspACI	CCGC	3 cut(s)	132, 339, 1112
BspANI	GGCC	5 cut(s)	74, 240, 583, 616, 1900
BspCNI	CTCAG	4 cut(s)	991, 996, 1351, 1647
BspHI	TCATGA	3 cut(s)	282, 550, 1219
BspLI	GGNNCC	2 cut(s)	365, 630
BspMAI	CTGCAG	2 cut(s)	793, 1721
BspMI	ACCTGC	1 cut(s)	1151
BspPI	GGATC	5 cut(s)	223, 259, 315, 560, 590
BspTI	CTTAAG	1 cut(s)	478
BspTNI	GGTCTC	1 cut(s)	602
BsrDI	GCAATG	2 cut(s)	1162, 1743
BsrFI	RCCGGY	1 cut(s)	616
BsrI	ACTGG	4 cut(s)	101, 179, 374, 1536
BssAI	RCCGGY	1 cut(s)	616
BssECI	CCNNGG	3 cut(s)	232, 255, 569
Bst2UI	CCWGG	5 cut(s)	76, 585, 613, 1698, 1725
Bst4CI	ACNGT	4 cut(s)	456, 1078, 1261, 1781
Bst6I	CTCTTC	7 cut(s)	405, 707, 735, 764, 821, 1079, 1466
BstAFI	CTTAAG	1 cut(s)	478
BstAPI	GCANNNNNTGC	1 cut(s)	2053
BstC8I	GCNNGC	3 cut(s)	358, 1551, 1881
BstDEI	CTNAG	7 cut(s)	56, 999, 1004, 1146, 1338, 1580, 1655
BstF5I	GGATG	4 cut(s)	84, 265, 649, 1276
BstH2I	RGCGCY	1 cut(s)	88
BstHHI	GCGC	2 cut(s)	87, 733
BstMAI	GTCTC	1 cut(s)	602
BstMWI	GCNNNNNNNGC	7 cut(s)	52, 66, 686, 728, 1330, 1339, 2053
BstNI	CCWGG	5 cut(s)	76, 585, 613, 1698, 1725
BstSCI	CCNGG	6 cut(s)	74, 583, 611, 624, 1696, 1723
BstSFI	CTRYAG	3 cut(s)	764, 789, 1717
BstV1I	GCAGC	6 cut(s)	545, 745, 775, 946, 1703, 2000
BstX2I	RGATCY	3 cut(s)	264, 565, 2071
BstYI	RGATCY	3 cut(s)	264, 565, 2071
BsuI	GTATCC	3 cut(s)	907, 1620, 1704
BsuRI	GGCC	5 cut(s)	74, 240, 583, 616, 1900
BtsCI	GGATG	4 cut(s)	84, 265, 649, 1276
BtsI	GCAGTG	1 cut(s)	353
BtsIMutI	CAGTG	5 cut(s)	186, 353, 367, 461, 1786
BveI	ACCTGC	1 cut(s)	1151
Cac8I	GCNNGC	3 cut(s)	358, 1551, 1881
CaiI	CAGNNNCTG	1 cut(s)	75
CciI	TCATGA	3 cut(s)	282, 550, 1219
CfoI	GCGC	2 cut(s)	87, 733
Cfr10I	RCCGGY	1 cut(s)	616
Cfr13I	GGNCC	2 cut(s)	72, 628
Csp6I	GTAC	9 cut(s)	120, 489, 810, 1257, 1402, 1484, 1539, 1860, 2120
CviAII	CATG	9 cut(s)	283, 290, 445, 551, 640, 938, 1220, 1514, 1595
CviQI	GTAC	9 cut(s)	120, 489, 810, 1257, 1402, 1484, 1539, 1860, 2120
DdeI	CTNAG	7 cut(s)	56, 999, 1004, 1146, 1338, 1580, 1655
EaeI	YGGCCR	1 cut(s)	1898
Eam1104I	CTCTTC	7 cut(s)	405, 707, 735, 764, 821, 1079, 1466
EarI	CTCTTC	7 cut(s)	405, 707, 735, 764, 821, 1079, 1466
Ecl136II	GAGCTC	3 cut(s)	680, 1276, 2041
Eco147I	AGGCCT	1 cut(s)	240
Eco24I	GRGCYC	3 cut(s)	682, 1278, 2043
Eco31I	GGTCTC	1 cut(s)	602
Eco32I	GATATC	1 cut(s)	1119
Eco47I	GGWCC	1 cut(s)	628
Eco47III	AGCGCT	1 cut(s)	86
Eco53kI	GAGCTC	3 cut(s)	680, 1276, 2041
Eco57I	CTGAAG	2 cut(s)	290, 1770
Eco88I	CYCGRG	4 cut(s)	405, 605, 675, 2042
EcoICRI	GAGCTC	3 cut(s)	680, 1276, 2041
EcoO109I	RGGNCCY	1 cut(s)	72
EcoRII	CCWGG	5 cut(s)	74, 583, 611, 1696, 1723
EcoRV	GATATC	1 cut(s)	1119
EcoT22I	ATGCAT	1 cut(s)	506
EcoT38I	GRGCYC	3 cut(s)	682, 1278, 2043
FaeI	CATG	9 cut(s)	286, 293, 448, 554, 643, 941, 1223, 1517, 1598
FalI	AAGNNNNNCTT	4 cut(s)	742, 774, 1878, 1910
FaqI	GGGAC	1 cut(s)	107
FatI	CATG	9 cut(s)	282, 289, 444, 550, 639, 937, 1219, 1513, 1594
FbaI	TGATCA	2 cut(s)	940, 1563
Fnu4HI	GCNGC	6 cut(s)	534, 734, 789, 935, 1717, 1989
FokI	GGATG	4 cut(s)	91, 272, 656, 1283
FriOI	GRGCYC	3 cut(s)	682, 1278, 2043
Fsp4HI	GCNGC	6 cut(s)	534, 734, 789, 935, 1717, 1989
FspBI	CTAG	6 cut(s)	41, 140, 747, 813, 1230, 2137
GlaI	GCGC	2 cut(s)	86, 732
GluI	GCNGC	6 cut(s)	534, 734, 789, 935, 1717, 1989
GsaI	CCCAGC	1 cut(s)	38
GsuI	CTGGAG	1 cut(s)	109
HaeII	RGCGCY	1 cut(s)	88
HaeIII	GGCC	5 cut(s)	74, 240, 583, 616, 1900
HapII	CCGG	5 cut(s)	26, 47, 617, 626, 1999
HhaI	GCGC	2 cut(s)	87, 733
Hin1II	CATG	9 cut(s)	286, 293, 448, 554, 643, 941, 1223, 1517, 1598
Hin6I	GCGC	2 cut(s)	85, 731
HinP1I	GCGC	2 cut(s)	85, 731
HindIII	AAGCTT	3 cut(s)	422, 521, 1962
HinfI	GANTC	7 cut(s)	111, 294, 328, 403, 817, 1188, 1667
HpaII	CCGG	5 cut(s)	26, 47, 617, 626, 1999
HphI	GGTGA	4 cut(s)	917, 1175, 1712, 1828
Hpy166II	GTNNAC	2 cut(s)	402, 637
Hpy188I	TCNGA	9 cut(s)	110, 116, 233, 570, 670, 1123, 1349, 1568, 2028
Hpy188III	TCNNGA	8 cut(s)	268, 283, 388, 407, 527, 551, 1220, 1810
Hpy8I	GTNNAC	2 cut(s)	402, 637
Hpy99I	CGWCG	1 cut(s)	14
HpyCH4III	ACNGT	4 cut(s)	456, 1078, 1261, 1781
HpyCH4IV	ACGT	4 cut(s)	9, 64, 122, 1059
HpyF10VI	GCNNNNNNNGC	7 cut(s)	52, 66, 686, 728, 1330, 1339, 2053
HpyF3I	CTNAG	7 cut(s)	56, 999, 1004, 1146, 1338, 1580, 1655
HpySE526I	ACGT	4 cut(s)	9, 64, 122, 1059
Hsp92II	CATG	9 cut(s)	286, 293, 448, 554, 643, 941, 1223, 1517, 1598
HspAI	GCGC	2 cut(s)	85, 731
Ksp22I	TGATCA	2 cut(s)	940, 1563
LmnI	GCTCC	7 cut(s)	82, 931, 964, 1281, 1310, 1573, 2038
Lsp1109I	GCAGC	6 cut(s)	545, 745, 775, 946, 1703, 2000
LweI	GCATC	5 cut(s)	321, 503, 520, 651, 1186
MaeI	CTAG	6 cut(s)	41, 140, 747, 813, 1230, 2137
MaeII	ACGT	4 cut(s)	9, 64, 122, 1059
MaeIII	GTNAC	3 cut(s)	1213, 1462, 1630
MfeI	CAATTG	2 cut(s)	1542, 1614
MflI	RGATCY	3 cut(s)	264, 565, 2071
MhlI	GDGCHC	3 cut(s)	682, 1278, 2043
MlsI	TGGCCA	1 cut(s)	1900
MluNI	TGGCCA	1 cut(s)	1900
MlyI	GAGTC	2 cut(s)	120, 397
MmeI	TCCRAC	3 cut(s)	88, 94, 1062
Mox20I	TGGCCA	1 cut(s)	1900
Mph1103I	ATGCAT	1 cut(s)	506
MroXI	GAANNNNTTC	2 cut(s)	1187, 1805
MscI	TGGCCA	1 cut(s)	1900
MseI	TTAA	8 cut(s)	147, 167, 479, 782, 1241, 1373, 1586, 1851
MslI	CAYNNNNRTG	3 cut(s)	499, 1284, 1599
Msp20I	TGGCCA	1 cut(s)	1900
MspCI	CTTAAG	1 cut(s)	478
MspI	CCGG	5 cut(s)	26, 47, 617, 626, 1999
MspR9I	CCNGG	6 cut(s)	76, 585, 613, 626, 1698, 1725
MunI	CAATTG	2 cut(s)	1542, 1614
Mva1269I	GAATGC	1 cut(s)	1333
MvaI	CCWGG	5 cut(s)	76, 585, 613, 1698, 1725
MwoI	GCNNNNNNNGC	7 cut(s)	52, 66, 686, 728, 1330, 1339, 2053
NciI	CCSGG	1 cut(s)	626
NlaIII	CATG	9 cut(s)	286, 293, 448, 554, 643, 941, 1223, 1517, 1598
NlaIV	GGNNCC	2 cut(s)	365, 630
NsiI	ATGCAT	1 cut(s)	506
PaeR7I	CTCGAG	3 cut(s)	405, 675, 2042
PagI	TCATGA	3 cut(s)	282, 550, 1219
PaqCI	CACCTGC	1 cut(s)	1151
PceI	AGGCCT	1 cut(s)	240
PctI	GAATGC	1 cut(s)	1333
PdmI	GAANNNNTTC	2 cut(s)	1187, 1805
PfeI	GAWTC	5 cut(s)	294, 328, 817, 1188, 1667
PkrI	GCNGC	6 cut(s)	535, 735, 790, 936, 1718, 1990
PleI	GAGTC	2 cut(s)	119, 397
PpsI	GAGTC	2 cut(s)	119, 397
PsiI	TTATAA	1 cut(s)	897
Psp124BI	GAGCTC	3 cut(s)	682, 1278, 2043
Psp6I	CCWGG	5 cut(s)	74, 583, 611, 1696, 1723
PspFI	CCCAGC	1 cut(s)	34
PspGI	CCWGG	5 cut(s)	74, 583, 611, 1696, 1723
PspN4I	GGNNCC	2 cut(s)	365, 630
PspPI	GGNCC	2 cut(s)	72, 628
PspXI	VCTCGAGB	2 cut(s)	675, 2042
PstI	CTGCAG	2 cut(s)	793, 1721
PstNI	CAGNNNCTG	1 cut(s)	75
PsuI	RGATCY	3 cut(s)	264, 565, 2071
RsaI	GTAC	9 cut(s)	121, 490, 811, 1258, 1403, 1485, 1540, 1861, 2121
RsaNI	GTAC	9 cut(s)	120, 489, 810, 1257, 1402, 1484, 1539, 1860, 2120
RseI	CAYNNNNRTG	3 cut(s)	499, 1284, 1599
SacI	GAGCTC	3 cut(s)	682, 1278, 2043
SaqAI	TTAA	8 cut(s)	147, 167, 479, 782, 1241, 1373, 1586, 1851
SatI	GCNGC	6 cut(s)	534, 734, 789, 935, 1717, 1989
Sau96I	GGNCC	2 cut(s)	72, 628
ScaI	AGTACT	2 cut(s)	811, 1485
SchI	GAGTC	2 cut(s)	120, 397
ScrFI	CCNGG	6 cut(s)	76, 585, 613, 626, 1698, 1725
SduI	GDGCHC	3 cut(s)	682, 1278, 2043
SfaNI	GCATC	5 cut(s)	321, 503, 520, 651, 1186
SfcI	CTRYAG	3 cut(s)	764, 789, 1717
Sfr274I	CTCGAG	3 cut(s)	405, 675, 2042
SinI	GGWCC	1 cut(s)	628
SlaI	CTCGAG	3 cut(s)	405, 675, 2042
SmiMI	CAYNNNNRTG	3 cut(s)	499, 1284, 1599
SmlI	CTYRAG	5 cut(s)	405, 478, 675, 1949, 2042
SmoI	CTYRAG	5 cut(s)	405, 478, 675, 1949, 2042
SseBI	AGGCCT	1 cut(s)	240
SsiI	CCGC	3 cut(s)	132, 339, 1112
SspI	AATATT	1 cut(s)	1051
SspMI	CTAG	6 cut(s)	41, 140, 747, 813, 1230, 2137
SstI	GAGCTC	3 cut(s)	682, 1278, 2043
StuI	AGGCCT	1 cut(s)	240
StyD4I	CCNGG	6 cut(s)	74, 583, 611, 624, 1696, 1723
TaaI	ACNGT	4 cut(s)	456, 1078, 1261, 1781
TaiI	ACGT	4 cut(s)	12, 67, 125, 1062
TaqI	TCGA	9 cut(s)	12, 375, 396, 406, 676, 738, 1250, 1809, 2043
TatI	WGTACW	3 cut(s)	809, 1483, 1538
TfiI	GAWTC	5 cut(s)	294, 328, 817, 1188, 1667
Tru1I	TTAA	8 cut(s)	147, 167, 479, 782, 1241, 1373, 1586, 1851
Tru9I	TTAA	8 cut(s)	147, 167, 479, 782, 1241, 1373, 1586, 1851
TscAI	CASTG	5 cut(s)	186, 353, 374, 461, 1786
TseI	GCWGC	6 cut(s)	533, 733, 788, 934, 1716, 1988
TspDTI	ATGAA	6 cut(s)	299, 576, 1236, 1302, 1452, 1665
TspRI	CASTG	5 cut(s)	186, 353, 374, 461, 1786
Vha464I	CTTAAG	1 cut(s)	478
VpaK11BI	GGWCC	1 cut(s)	628
XapI	RAATTY	4 cut(s)	861, 1032, 1784, 1805
XhoI	CTCGAG	3 cut(s)	405, 675, 2042
XmnI	GAANNNNTTC	2 cut(s)	1187, 1805
XspI	CTAG	6 cut(s)	41, 140, 747, 813, 1230, 2137
ZrmI	AGTACT	2 cut(s)	811, 1485
Zsp2I	ATGCAT	1 cut(s)	506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.