Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0003901

Physical Location & Seq

Genomic Coordinates Forward (+)

68170514 .. 68172426

Gene Structure 1913 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00048180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGATCCGAGGAGGCCTGTGGAAGAACACCGAGGATGAGATCCTGAAGGTGGCAGTCATGAAACATGGAATCAACGAGTGGGATCGCATCTCAACGCTGTTGAATCGCAAATCTGCAAAGCAGTGTAAGGCTCGCTGGTTCCACTGGCTCGAATCCTCAATCAAAAAGGGCGAGTGGACTCGAGAAGAGGACGAGAAGCTTCTCCATCTTGCAAAGCTCATGCCTTCACAGTGGAGAACAATAGCCGAAAACGTAAGTGGTCGTACTGCATCTCAATGCATTGATAGGTATGAGAAGCTTCTTGATGCAGCTTGTATTGATAATCATGATAACTATGAAGATCCGAGGAGATTGAGGCCAGGAGAGATTGATCCCAACCCCGAGACCAGGCCTGCTCGCCCAGACCCTGTGGACATGGATGAGGATGAGAAGGAGATGCTTTCAGAGGCTCGAGCTCGGTTGGCTAACACCAAAGGGAAGAAGGCGAAGAGGAAGGCGAGAGAGGCGCAGCTCGAAGAGGCTAGAAGCTTTGCTTCTCTACAGAAGAGGAGAGAATTAAAGGCTGCAGGGATTGATGATAAGAGTACTAGGAATCAGCAGAAGAAGAAAAGGAATGTAATAGACTACAATGCAGAAATTCCCTTTGAGAAGAAGCCTCCTTTGGGGTTTTATAATGTCGGTGATGAGGATACAGAAGTAGTATTGGAGCAGCATGATCAGTTTCCCTTGACTATTGAGGAGCTTGAAGGGAAGAGAAGGGTTGATGTGGAAGCTGAGCTGAGAAAACAAGATATTGCAAAGAACAAAATTTCCAACAAGTTGAATATTGATGATGTTTCCAATATGGAAACAGTTAGGAAGAGATCAAAACTTATGCTTCCTGCACCGCAGATATCTGACATTGAATTGGAGGAGATTGCTAAGATGAGCAATGCAGGTGATCTTGTTGGTAGCGAGAATGGATTCACAGATGCAAATTATTTCGGGGTTACTCATGAAACTCCTAGATTTGGCTTAACACCATCAAAGGGTACTGTCATTAGGGATGAGCTCCATATCAATGAAGGCATTGATAAAGATGATGGAGCAAAATTGAAGCAACTAAAGCATTCTCAGCAGTTCAGAATAAATAACTTGCATAAGGGTTTAAGCAATTTGCCAAAGCCCAAAAATGAGTACCAAATAGTTGTGCAACCAATCCCAGAAGATAATGAAGAAGCAGGACATCAGGCATTAGTTACAAAGAAGAGATCAAAAGTACTGAATATGAGAGCAGATGAGGCTAAGCATGGAGCGGTAGCTGTTCGTCCCAGTACAATTGAGCGGGCTGACCAAATGATCAGAAAGGAGCTTCTTAGCTTAAAAGAGCATGATTCCGAAGAAGTTCAGTATCCTGGTGAAGCACACAAAAGCTGCAGTCCTGGTTGTTGTCTATCAAGCATTGCTGAAGATGAGAACCCTGTGGCTTGTTTGCGGAGTGAATTTGAGAAGGTGCAGAATGAATTCGAGAAGGTGAAGAATAAGGCACAAATCATTGAGAACAAGGTTAAAGTTCGTACAGATGGTTATGAGAAGCGAGCTAAAGATGTTCTTTGGCCAAAAATAGAGGAAACTTTCAAGCAAATGGACACAGCCACAAAAGAACTTGAGTGCTTCCAAGCTTTACAGAAGCAAGAACAATTAGCAGCAACAAGCCGGATAAATAATATGTGGGAGGAAGTTCAGAAACAAAAGGAGCTCGAGCAAACTCTGCAAAAGAGGTATGGAGATCTTGTAGTGAAGCTGGAAAAAATACAGCACCAATCCAAAGGCGCAGTACCAATAATGCTCTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006357 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009870 GO:0009889 GO:0009987 GO:0010204 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0030154 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0032502 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044444 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

Myb_Cef Myb_DNA-binding

Protein Analysis

611

Amino Acids

70.21

Weight (kDa)

6.95

Isoelectric Point (pI)

51.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	5 - 50	1.6e-11	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	7 - 67	2.2e-11	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	56 - 101	3.8e-13	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	59 - 105	1.9e-09	Myb-like DNA-binding domain
Myb_Cef	PF11831	333 - 414	8.6e-14	pre-mRNA splicing factor component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003901)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09770
fragaria_vesca	FvH4_3g19200 FvH4_3g19210 FvH4_6g01950
malus_domestica	MD04G1229500.v1.1 MD12G1246400.v1.1
prunus_persica	Prupe.6G349400_v2.0.a1
pyrus_communis	pycom04g20330 pycom04g20340 pycom12g22600
rosa_chinensis	RchiOBHm_Chr3g0449801 RchiOBHm_Chr5g0032281
rosa_laevigata	RLG00000025799 RLG00000033377
rosa_multiflora	Rmu_co8441867.1_g000001 Rmu_sc0000610.1_g000011 Rmu_sc0013983.1_g000008 Rmu_ssc0000013.1_g000001
rosa_roxburghii	Rroxscaffold_1G00048170 Rroxscaffold_1G00048180 Rroxscaffold_6G00427620
rosa_rugosa	Rorug02G0623400 Rorug02G0623400 Rorug05G0130300
rosa_samantha	Rh3AG021600 Rh3BG022300 Rh3CG020900 Rh3DG022000 Rh5BG224900 Rh5CG250300 Rh5DG229500 Rh5DG229600
rosa_wichuraiana	Rw3G001770 Rw5G020450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	672
AarI	CACCTGC	1 cut(s)	926
Acc36I	ACCTGC	1 cut(s)	926
AccBSI	CCGCTC	2 cut(s)	1295, 1324
AciI	CCGC	4 cut(s)	887, 1295, 1324, 1474
AclWI	GGATC	4 cut(s)	34, 90, 335, 365
AcoI	YGGCCR	1 cut(s)	1595
AcsI	RAATTY	4 cut(s)	636, 807, 1481, 1502
AcuI	CTGAAG	2 cut(s)	65, 1467
AfaI	GTAC	8 cut(s)	265, 586, 1033, 1178, 1260, 1315, 1558, 1818
AfiI	CCNNNNNNNGG	5 cut(s)	49, 387, 662, 1010, 1028
AgsI	TTSAA	6 cut(s)	103, 746, 823, 905, 1096, 1618
AjnI	CCWGG	4 cut(s)	358, 386, 1393, 1420
AjuI	GAANNNNNNNTTGG	2 cut(s)	644, 676
AloI	GAACNNNNNNTCC	2 cut(s)	794, 826
Alw21I	GWGCWC	3 cut(s)	457, 1053, 1740
Alw26I	GTCTC	1 cut(s)	377
AlwI	GGATC	4 cut(s)	34, 90, 335, 365
AlwNI	CAGNNNCTG	1 cut(s)	407
Ama87I	CYCGRG	4 cut(s)	180, 380, 450, 1739
AoxI	GGCC	4 cut(s)	13, 356, 389, 1595
ApeKI	GCWGC	6 cut(s)	308, 508, 563, 709, 1413, 1685
ApoI	RAATTY	4 cut(s)	636, 807, 1481, 1502
Asp700I	GAANNNNTTC	3 cut(s)	962, 1383, 1502
AspLEI	GCGC	2 cut(s)	508, 1814
AsuHPI	GGTGA	4 cut(s)	692, 950, 1409, 1525
AvaI	CYCGRG	4 cut(s)	180, 380, 450, 1739
BaeI	ACNNNNGTAYC	2 cut(s)	681, 714
BalI	TGGCCA	1 cut(s)	1597
BanII	GRGCYC	3 cut(s)	457, 1053, 1740
Bbv12I	GWGCWC	3 cut(s)	457, 1053, 1740
BbvI	GCAGC	6 cut(s)	320, 520, 550, 721, 1400, 1697
BccI	CCATC	4 cut(s)	213, 1030, 1076, 1556
BciT130I	CCWGG	4 cut(s)	360, 388, 1395, 1422
BciVI	GTATCC	2 cut(s)	682, 1401
BclI	TGATCA	2 cut(s)	715, 1338
BcoDI	GTCTC	1 cut(s)	377
BfaI	CTAG	4 cut(s)	522, 588, 1005, 1834
BfmI	CTRYAG	3 cut(s)	539, 564, 1414
BfuAI	ACCTGC	1 cut(s)	926
BfuI	GTATCC	2 cut(s)	682, 1401
BglII	AGATCT	1 cut(s)	1768
BisI	GCNGC	6 cut(s)	309, 509, 564, 710, 1414, 1686
BlpI	GCTNAGC	2 cut(s)	774, 1284
BlsI	GCNGC	6 cut(s)	310, 510, 565, 711, 1415, 1687
BmcAI	AGTACT	2 cut(s)	586, 1260
Bme1390I	CCNGG	4 cut(s)	360, 388, 1395, 1422
BmeT110I	CYCGRG	4 cut(s)	180, 380, 450, 1739
BmiI	GGNNCC	1 cut(s)	140
BmrFI	CCNGG	4 cut(s)	360, 388, 1395, 1422
BmrI	ACTGGG	1 cut(s)	1305
BmsI	GCATC	5 cut(s)	96, 278, 295, 426, 961
BmuI	ACTGGG	1 cut(s)	1305
Bpu1102I	GCTNAGC	2 cut(s)	774, 1284
BpuEI	CTTGAG	1 cut(s)	1667
BsaI	GGTCTC	1 cut(s)	377
BsaJI	CCNNGG	3 cut(s)	7, 30, 344
BsaXI	ACNNNNNCTCC	2 cut(s)	1758, 1788
Bsc4I	CCNNNNNNNGG	5 cut(s)	49, 387, 662, 1010, 1028
Bse1I	ACTGG	2 cut(s)	149, 1311
Bse3DI	GCAATG	2 cut(s)	937, 1440
BseBI	CCWGG	4 cut(s)	360, 388, 1395, 1422
BseDI	CCNNGG	3 cut(s)	7, 30, 344
BseGI	GGATG	4 cut(s)	40, 424, 430, 1051
BseLI	CCNNNNNNNGG	5 cut(s)	49, 387, 662, 1010, 1028
BseMI	GCAATG	2 cut(s)	937, 1440
BseMII	CTCAG	3 cut(s)	765, 770, 1127
BseNI	ACTGG	2 cut(s)	149, 1311
BseRI	GAGGAG	5 cut(s)	24, 361, 562, 752, 926
BseXI	GCAGC	6 cut(s)	320, 520, 550, 721, 1400, 1697
BsgI	GTGCAG	2 cut(s)	867, 1514
BshFI	GGCC	4 cut(s)	15, 358, 391, 1597
BsiHKAI	GWGCWC	3 cut(s)	457, 1053, 1740
BsiHKCI	CYCGRG	4 cut(s)	180, 380, 450, 1739
BsiSI	CCGG	1 cut(s)	1696
BslFI	GGGAC	1 cut(s)	1293
BslI	CCNNNNNNNGG	5 cut(s)	49, 387, 662, 1010, 1028
BsmAI	GTCTC	1 cut(s)	377
BsmFI	GGGAC	1 cut(s)	1293
BsmI	GAATGC	1 cut(s)	1108
BsnI	GGCC	4 cut(s)	15, 358, 391, 1597
Bso31I	GGTCTC	1 cut(s)	377
BsoBI	CYCGRG	4 cut(s)	180, 380, 450, 1739
Bsp1286I	GDGCHC	3 cut(s)	457, 1053, 1740
Bsp1720I	GCTNAGC	2 cut(s)	774, 1284
BspACI	CCGC	4 cut(s)	887, 1295, 1324, 1474
BspANI	GGCC	4 cut(s)	15, 358, 391, 1597
BspCNI	CTCAG	3 cut(s)	766, 771, 1126
BspHI	TCATGA	3 cut(s)	57, 325, 994
BspLI	GGNNCC	1 cut(s)	140
BspMAI	CTGCAG	2 cut(s)	568, 1418
BspMI	ACCTGC	1 cut(s)	926
BspPI	GGATC	4 cut(s)	34, 90, 335, 365
BspTNI	GGTCTC	1 cut(s)	377
BsrBI	CCGCTC	2 cut(s)	1295, 1324
BsrDI	GCAATG	2 cut(s)	937, 1440
BsrI	ACTGG	2 cut(s)	149, 1311
BssECI	CCNNGG	3 cut(s)	7, 30, 344
Bst2UI	CCWGG	4 cut(s)	360, 388, 1395, 1422
Bst4CI	ACNGT	3 cut(s)	231, 853, 1036
Bst6I	CTCTTC	7 cut(s)	180, 482, 510, 539, 746, 854, 1241
BstAPI	GCANNNNNTGC	1 cut(s)	1750
BstC8I	GCNNGC	5 cut(s)	133, 393, 397, 1326, 1578
BstDEI	CTNAG	6 cut(s)	774, 779, 921, 1113, 1284, 1355
BstF5I	GGATG	4 cut(s)	40, 424, 430, 1051
BstHHI	GCGC	2 cut(s)	508, 1814
BstMAI	GTCTC	1 cut(s)	377
BstMWI	GCNNNNNNNGC	6 cut(s)	461, 503, 1105, 1114, 1280, 1750
BstNI	CCWGG	4 cut(s)	360, 388, 1395, 1422
BstSCI	CCNGG	4 cut(s)	358, 386, 1393, 1420
BstSFI	CTRYAG	3 cut(s)	539, 564, 1414
BstV1I	GCAGC	6 cut(s)	320, 520, 550, 721, 1400, 1697
BstX2I	RGATCY	3 cut(s)	39, 340, 1768
BstYI	RGATCY	3 cut(s)	39, 340, 1768
BsuI	GTATCC	2 cut(s)	682, 1401
BsuRI	GGCC	4 cut(s)	15, 358, 391, 1597
BtsCI	GGATG	4 cut(s)	40, 424, 430, 1051
BtsI	GCAGTG	1 cut(s)	128
BtsIMutI	CAGTG	3 cut(s)	128, 142, 236
BveI	ACCTGC	1 cut(s)	926
Cac8I	GCNNGC	5 cut(s)	133, 393, 397, 1326, 1578
CaiI	CAGNNNCTG	1 cut(s)	407
CciI	TCATGA	3 cut(s)	57, 325, 994
CfoI	GCGC	2 cut(s)	508, 1814
Csp6I	GTAC	8 cut(s)	264, 585, 1032, 1177, 1259, 1314, 1557, 1817
CviAII	CATG	9 cut(s)	58, 65, 220, 326, 415, 713, 995, 1289, 1370
CviQI	GTAC	8 cut(s)	264, 585, 1032, 1177, 1259, 1314, 1557, 1817
DdeI	CTNAG	6 cut(s)	774, 779, 921, 1113, 1284, 1355
EaeI	YGGCCR	1 cut(s)	1595
Eam1104I	CTCTTC	7 cut(s)	180, 482, 510, 539, 746, 854, 1241
EarI	CTCTTC	7 cut(s)	180, 482, 510, 539, 746, 854, 1241
Ecl136II	GAGCTC	3 cut(s)	455, 1051, 1738
Eco147I	AGGCCT	2 cut(s)	15, 391
Eco24I	GRGCYC	3 cut(s)	457, 1053, 1740
Eco31I	GGTCTC	1 cut(s)	377
Eco32I	GATATC	1 cut(s)	894
Eco53kI	GAGCTC	3 cut(s)	455, 1051, 1738
Eco57I	CTGAAG	2 cut(s)	65, 1467
Eco88I	CYCGRG	4 cut(s)	180, 380, 450, 1739
EcoICRI	GAGCTC	3 cut(s)	455, 1051, 1738
EcoRI	GAATTC	1 cut(s)	1502
EcoRII	CCWGG	4 cut(s)	358, 386, 1393, 1420
EcoRV	GATATC	1 cut(s)	894
EcoT22I	ATGCAT	1 cut(s)	281
EcoT38I	GRGCYC	3 cut(s)	457, 1053, 1740
FaeI	CATG	9 cut(s)	61, 68, 223, 329, 418, 716, 998, 1292, 1373
FalI	AAGNNNNNCTT	4 cut(s)	517, 549, 1575, 1607
FaqI	GGGAC	1 cut(s)	1293
FatI	CATG	9 cut(s)	57, 64, 219, 325, 414, 712, 994, 1288, 1369
FauI	CCCGC	1 cut(s)	1317
FbaI	TGATCA	2 cut(s)	715, 1338
Fnu4HI	GCNGC	6 cut(s)	309, 509, 564, 710, 1414, 1686
FokI	GGATG	4 cut(s)	47, 431, 437, 1058
FriOI	GRGCYC	3 cut(s)	457, 1053, 1740
Fsp4HI	GCNGC	6 cut(s)	309, 509, 564, 710, 1414, 1686
FspBI	CTAG	4 cut(s)	522, 588, 1005, 1834
GlaI	GCGC	2 cut(s)	507, 1813
GluI	GCNGC	6 cut(s)	309, 509, 564, 710, 1414, 1686
HaeIII	GGCC	4 cut(s)	15, 358, 391, 1597
HapII	CCGG	1 cut(s)	1696
HhaI	GCGC	2 cut(s)	508, 1814
Hin1II	CATG	9 cut(s)	61, 68, 223, 329, 418, 716, 998, 1292, 1373
Hin6I	GCGC	2 cut(s)	506, 1812
HinP1I	GCGC	2 cut(s)	506, 1812
HindIII	AAGCTT	4 cut(s)	197, 296, 526, 1659
HinfI	GANTC	7 cut(s)	69, 103, 152, 178, 592, 963, 1373
HpaII	CCGG	1 cut(s)	1696
HphI	GGTGA	4 cut(s)	692, 950, 1409, 1525
Hpy166II	GTNNAC	2 cut(s)	177, 412
Hpy188I	TCNGA	8 cut(s)	8, 345, 445, 898, 1124, 1343, 1378, 1725
Hpy188III	TCNNGA	7 cut(s)	43, 58, 182, 302, 326, 995, 1507
Hpy8I	GTNNAC	2 cut(s)	177, 412
HpyCH4III	ACNGT	3 cut(s)	231, 853, 1036
HpyCH4IV	ACGT	1 cut(s)	252
HpyF10VI	GCNNNNNNNGC	6 cut(s)	461, 503, 1105, 1114, 1280, 1750
HpyF3I	CTNAG	6 cut(s)	774, 779, 921, 1113, 1284, 1355
HpySE526I	ACGT	1 cut(s)	252
Hsp92II	CATG	9 cut(s)	61, 68, 223, 329, 418, 716, 998, 1292, 1373
HspAI	GCGC	2 cut(s)	506, 1812
Ksp22I	TGATCA	2 cut(s)	715, 1338
LmnI	GCTCC	7 cut(s)	706, 739, 1056, 1085, 1292, 1348, 1735
Lsp1109I	GCAGC	6 cut(s)	320, 520, 550, 721, 1400, 1697
LweI	GCATC	5 cut(s)	96, 278, 295, 426, 961
MaeI	CTAG	4 cut(s)	522, 588, 1005, 1834
MaeII	ACGT	1 cut(s)	252
MaeIII	GTNAC	2 cut(s)	988, 1237
MbiI	CCGCTC	2 cut(s)	1295, 1324
MfeI	CAATTG	1 cut(s)	1317
MflI	RGATCY	3 cut(s)	39, 340, 1768
MhlI	GDGCHC	3 cut(s)	457, 1053, 1740
MlsI	TGGCCA	1 cut(s)	1597
MluNI	TGGCCA	1 cut(s)	1597
MlyI	GAGTC	1 cut(s)	172
MmeI	TCCRAC	1 cut(s)	837
Mox20I	TGGCCA	1 cut(s)	1597
Mph1103I	ATGCAT	1 cut(s)	281
MroXI	GAANNNNTTC	3 cut(s)	962, 1383, 1502
MscI	TGGCCA	1 cut(s)	1597
MseI	TTAA	5 cut(s)	557, 1016, 1148, 1361, 1548
MslI	CAYNNNNRTG	2 cut(s)	274, 1059
Msp20I	TGGCCA	1 cut(s)	1597
MspI	CCGG	1 cut(s)	1696
MspR9I	CCNGG	4 cut(s)	360, 388, 1395, 1422
MunI	CAATTG	1 cut(s)	1317
Mva1269I	GAATGC	1 cut(s)	1108
MvaI	CCWGG	4 cut(s)	360, 388, 1395, 1422
MwoI	GCNNNNNNNGC	6 cut(s)	461, 503, 1105, 1114, 1280, 1750
NlaIII	CATG	9 cut(s)	61, 68, 223, 329, 418, 716, 998, 1292, 1373
NlaIV	GGNNCC	1 cut(s)	140
NsiI	ATGCAT	1 cut(s)	281
PaeR7I	CTCGAG	3 cut(s)	180, 450, 1739
PagI	TCATGA	3 cut(s)	57, 325, 994
PaqCI	CACCTGC	1 cut(s)	926
PceI	AGGCCT	2 cut(s)	15, 391
PctI	GAATGC	1 cut(s)	1108
PdmI	GAANNNNTTC	3 cut(s)	962, 1383, 1502
PfeI	GAWTC	6 cut(s)	69, 103, 152, 592, 963, 1373
PkrI	GCNGC	6 cut(s)	310, 510, 565, 711, 1415, 1687
PleI	GAGTC	1 cut(s)	172
PpsI	GAGTC	1 cut(s)	172
PsiI	TTATAA	1 cut(s)	672
Psp124BI	GAGCTC	3 cut(s)	457, 1053, 1740
Psp6I	CCWGG	4 cut(s)	358, 386, 1393, 1420
PspGI	CCWGG	4 cut(s)	358, 386, 1393, 1420
PspN4I	GGNNCC	1 cut(s)	140
PspXI	VCTCGAGB	2 cut(s)	450, 1739
PstI	CTGCAG	2 cut(s)	568, 1418
PstNI	CAGNNNCTG	1 cut(s)	407
PsuI	RGATCY	3 cut(s)	39, 340, 1768
RsaI	GTAC	8 cut(s)	265, 586, 1033, 1178, 1260, 1315, 1558, 1818
RsaNI	GTAC	8 cut(s)	264, 585, 1032, 1177, 1259, 1314, 1557, 1817
RseI	CAYNNNNRTG	2 cut(s)	274, 1059
SacI	GAGCTC	3 cut(s)	457, 1053, 1740
SaqAI	TTAA	5 cut(s)	557, 1016, 1148, 1361, 1548
SatI	GCNGC	6 cut(s)	309, 509, 564, 710, 1414, 1686
ScaI	AGTACT	2 cut(s)	586, 1260
SchI	GAGTC	1 cut(s)	172
ScrFI	CCNGG	4 cut(s)	360, 388, 1395, 1422
SduI	GDGCHC	3 cut(s)	457, 1053, 1740
SfaNI	GCATC	5 cut(s)	96, 278, 295, 426, 961
SfcI	CTRYAG	3 cut(s)	539, 564, 1414
Sfr274I	CTCGAG	3 cut(s)	180, 450, 1739
SlaI	CTCGAG	3 cut(s)	180, 450, 1739
SmiMI	CAYNNNNRTG	2 cut(s)	274, 1059
SmlI	CTYRAG	4 cut(s)	180, 450, 1646, 1739
SmoI	CTYRAG	4 cut(s)	180, 450, 1646, 1739
SseBI	AGGCCT	2 cut(s)	15, 391
SsiI	CCGC	4 cut(s)	887, 1295, 1324, 1474
SspI	AATATT	1 cut(s)	826
SspMI	CTAG	4 cut(s)	522, 588, 1005, 1834
SstI	GAGCTC	3 cut(s)	457, 1053, 1740
StuI	AGGCCT	2 cut(s)	15, 391
StyD4I	CCNGG	4 cut(s)	358, 386, 1393, 1420
TaaI	ACNGT	3 cut(s)	231, 853, 1036
TaiI	ACGT	1 cut(s)	255
TaqI	TCGA	6 cut(s)	150, 181, 451, 513, 1506, 1740
TatI	WGTACW	3 cut(s)	584, 1258, 1313
TfiI	GAWTC	6 cut(s)	69, 103, 152, 592, 963, 1373
Tru1I	TTAA	5 cut(s)	557, 1016, 1148, 1361, 1548
Tru9I	TTAA	5 cut(s)	557, 1016, 1148, 1361, 1548
TscAI	CASTG	3 cut(s)	128, 149, 236
TseI	GCWGC	6 cut(s)	308, 508, 563, 709, 1413, 1685
TspDTI	ATGAA	6 cut(s)	74, 351, 1011, 1077, 1227, 1515
TspRI	CASTG	3 cut(s)	128, 149, 236
XapI	RAATTY	4 cut(s)	636, 807, 1481, 1502
XhoI	CTCGAG	3 cut(s)	180, 450, 1739
XmnI	GAANNNNTTC	3 cut(s)	962, 1383, 1502
XspI	CTAG	4 cut(s)	522, 588, 1005, 1834
ZrmI	AGTACT	2 cut(s)	586, 1260
Zsp2I	ATGCAT	1 cut(s)	281

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.