Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003901

Physical Location & Seq

Genomic Coordinates Reverse (-)

73967660 .. 73971784

Gene Structure 4125 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0623400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGGCCGGACTAGAAGAACTGAGGAAAAAGCTGACACCTTTGTTCGATGCAGAGAAGGGTCTGGGCTTGGGATCGTCCACCTTGGACCCGTCAGATTCATACACACTTTCGGACAGAACGGTGGAGTTGCTGAGCCGATCGTACGGCGTGTACAACATCAACGAGCTGGGACTGCAGAAGTGCACGTCTTCTACGGTGGACGATACCACAGAGAAGACCTACCGGTGCGCTTCGCATGAGATGAGGGTGTTTGGGGCCATTGGGAGTGGCGCCAGCAGTGTTGTGCAGAGAGCTATTCACATTCCCACTCATAGGATTATAGCGCTAAAAAGGATCAACATTTTCGAAAAGGAGAAAAGGCAGCAGCTGCTTACTGAGATAAGGACACTATGTGAAGCACCTTGTTACCAAGGTCTTGTAGAGTTTCATGGTGCATTTTATACGCCGGATTCCGGACAGATAAGCATAGCTTTGGAGTATATGGATGGAGGATCGCTGGCAGATATCTTACGGTTGCGGAAAAGAATACCCGAACCTCTACTTTCTTCTATGTTTCAGAAGCTTCTACATGGACTGAGCTACTTGCATGGAGTTAGGTATCTAGTACACAGAGACATAAAACCTGCCAATTTGCTTATAAATCTAAAGGGTGAGCCAAAGATAACAGACTTTGGTATAAGTGCTGGCTTGGAGAATTCTATGGCAATGTGTGCAACATTTGTTGGGACAGTTACATACATGTCGCCTGAGCGAATTCGAAATGAGAATTATTCTTACCCAGCTGATATTTGGAGTCTTGGGCTTGCTCTCTTTGAGTGTGGTACTGGAGAATTTCCATATACAGCCAATGATGGACCTGTCAATCTTATGTTGCAGATCTTAGATGATCCATCACCGACACCTTCAAAACAGAACTTTTCACCAGAGTTCTGCTCGTTTATTGAAGCTTGCTTGCAGAAGGATGCAGATGCTAGACCAACTGCAGAGCAGCTACTTTCACACCCCTTCATTACAAAGTATGAGAAGTCCCAAGTGGACTTAGCAGCATTTGTTCGAAGTGTTTTTGATCCAACGCAAAGGATGAAGGACTTGGCAGATATGCTTACCATACATTTTTACTTGCTCTTTGATGGATCTGATGAGCTCTGGCAACATGCAAAGACGTTATACAATGAAGATTCAGTTTTCAGTTTCTCTGGCAAGCAACTAGTCGGCGCGAATGATATATTTGCCTCACTCTCTAGTATACGAAGTACATTAGCTGGTGACTGGCCTCCTGAGAGGCTTGTGCATGTTGTGGAAAAGCTTCAGTGCCGTGCTCAAGGTCAGGATGGAGTAGCAATTAGGGTATCAGGATCCTTCATTGTTGGGAATCAGTTCCTTATATGTGGAGACGGTGTTCAGGTAGAGGGCTTGCCCAGTATTAAAGATCTTTCCATTGATATTTCGAGTAAGCGAATGGGTACATTCCGTGAGCAGTTCATTATGGAGCCAAGCACTATTATAGGGCGCTACTCAATTGCTAGCCAAGAACTTTATATTATGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006357 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009870 GO:0009889 GO:0009987 GO:0010204 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0030154 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0032502 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044444 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

Myb_Cef Myb_DNA-binding

Protein Analysis

516

Amino Acids

57.46

Weight (kDa)

5.49

Isoelectric Point (pI)

41.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	84 - 337	2.5e-59	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	86 - 333	1e-34	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003901)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09770
fragaria_vesca	FvH4_3g19200 FvH4_3g19210 FvH4_6g01950
malus_domestica	MD04G1229500.v1.1 MD12G1246400.v1.1
prunus_persica	Prupe.6G349400_v2.0.a1
pyrus_communis	pycom04g20330 pycom04g20340 pycom12g22600
rosa_chinensis	RchiOBHm_Chr3g0449801 RchiOBHm_Chr5g0032281
rosa_laevigata	RLG00000025799 RLG00000033377
rosa_multiflora	Rmu_co8441867.1_g000001 Rmu_sc0000610.1_g000011 Rmu_sc0013983.1_g000008 Rmu_ssc0000013.1_g000001
rosa_roxburghii	Rroxscaffold_1G00048170 Rroxscaffold_1G00048180 Rroxscaffold_6G00427620
rosa_rugosa	Rorug02G0623400 Rorug02G0623400 Rorug05G0130300
rosa_samantha	Rh3AG021600 Rh3BG022300 Rh3CG020900 Rh3DG022000 Rh5BG224900 Rh5CG250300 Rh5DG229500 Rh5DG229600
rosa_wichuraiana	Rw3G001770 Rw5G020450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	638
Acc36I	ACCTGC	1 cut(s)	631
AccB1I	GGYRCC	1 cut(s)	269
AccI	GTMKAC	1 cut(s)	1246
AccII	CGCG	1 cut(s)	1217
AccIII	TCCGGA	1 cut(s)	452
AciI	CCGC	1 cut(s)	517
AclWI	GGATC	8 cut(s)	79, 341, 499, 881, 1061, 1141, 1350, 1363
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	3 cut(s)	694, 753, 830
AcuI	CTGAAG	1 cut(s)	1292
AcyI	GRCGYC	1 cut(s)	270
AdeI	CACNNNGTG	1 cut(s)	392
AfaI	GTAC	6 cut(s)	143, 152, 606, 823, 1255, 1465
AfeI	AGCGCT	1 cut(s)	324
AfiI	CCNNNNNNNGG	2 cut(s)	312, 452
AflIII	ACRYGT	1 cut(s)	738
AgeI	ACCGGT	1 cut(s)	222
AgsI	TTSAA	2 cut(s)	906, 944
AhlI	ACTAGT	1 cut(s)	1207
AjiI	CACGTC	1 cut(s)	186
AloI	GAACNNNNNNTCC	2 cut(s)	1383, 1415
Alw21I	GWGCWC	3 cut(s)	185, 1146, 1321
Alw26I	GTCTC	2 cut(s)	606, 1386
Alw44I	GTGCAC	1 cut(s)	181
AlwI	GGATC	8 cut(s)	79, 341, 499, 881, 1061, 1141, 1350, 1363
AlwNI	CAGNNNCTG	1 cut(s)	367
Aor13HI	TCCGGA	1 cut(s)	452
Aor51HI	AGCGCT	1 cut(s)	324
AoxI	GGCC	3 cut(s)	3, 255, 1271
ApaLI	GTGCAC	1 cut(s)	181
ApeKI	GCWGC	5 cut(s)	361, 364, 367, 988, 1043
ApoI	RAATTY	3 cut(s)	694, 753, 830
AsiGI	ACCGGT	1 cut(s)	222
Asp700I	GAANNNNTTC	2 cut(s)	1305, 1376
AspLEI	GCGC	5 cut(s)	230, 272, 325, 1217, 1512
AspS9I	GGNCC	3 cut(s)	85, 255, 854
AsuHPI	GGTGA	4 cut(s)	662, 885, 912, 1277
AsuII	TTCGAA	3 cut(s)	345, 757, 1054
AsuNHI	GCTAGC	1 cut(s)	1523
AvaII	GGWCC	2 cut(s)	85, 854
BaeGI	GKGCMC	1 cut(s)	185
BamHI	GGATCC	1 cut(s)	1355
BanI	GGYRCC	1 cut(s)	269
BanII	GRGCYC	1 cut(s)	1146
BbsI	GAAGAC	2 cut(s)	180, 221
Bbv12I	GWGCWC	3 cut(s)	185, 1146, 1321
BbvI	GCAGC	5 cut(s)	354, 373, 376, 1000, 1055
BccI	CCATC	5 cut(s)	479, 845, 898, 1124, 1325
BceAI	ACGGC	2 cut(s)	160, 1299
BcoDI	GTCTC	2 cut(s)	606, 1386
BcuI	ACTAGT	1 cut(s)	1207
BfaI	CTAG	6 cut(s)	11, 602, 972, 1208, 1242, 1524
BfmI	CTRYAG	2 cut(s)	173, 981
BfoI	RGCGCY	3 cut(s)	273, 326, 1513
BfuAI	ACCTGC	1 cut(s)	631
BglII	AGATCT	2 cut(s)	876, 1429
BisI	GCNGC	5 cut(s)	362, 365, 368, 989, 1044
BlpI	GCTNAGC	1 cut(s)	131
BlsI	GCNGC	5 cut(s)	363, 366, 369, 990, 1045
Bme18I	GGWCC	2 cut(s)	85, 854
BmgBI	CACGTC	1 cut(s)	186
BmgT120I	GGNCC	3 cut(s)	85, 255, 854
BmiI	GGNNCC	5 cut(s)	87, 256, 271, 1357, 1491
BmrI	ACTGGG	1 cut(s)	1413
BmsI	GCATC	3 cut(s)	37, 952, 958
BmtI	GCTAGC	1 cut(s)	1527
BmuI	ACTGGG	1 cut(s)	1413
BpiI	GAAGAC	2 cut(s)	180, 221
BplI	GAGNNNNNCTC	2 cut(s)	917, 949
BpmI	CTGGAG	1 cut(s)	846
Bpu10I	CCTNAGC	1 cut(s)	747
Bpu1102I	GCTNAGC	1 cut(s)	131
Bpu14I	TTCGAA	3 cut(s)	345, 757, 1054
BpuEI	CTTGAG	1 cut(s)	1305
BsaHI	GRCGYC	1 cut(s)	270
BsaJI	CCNNGG	2 cut(s)	81, 409
BsaWI	WCCGGW	2 cut(s)	222, 452
BsaXI	ACNNNNNCTCC	2 cut(s)	1383, 1413
Bsc4I	CCNNNNNNNGG	2 cut(s)	312, 452
Bse118I	RCCGGY	1 cut(s)	222
Bse1I	ACTGG	3 cut(s)	829, 1274, 1419
Bse3DI	GCAATG	1 cut(s)	711
BseAI	TCCGGA	1 cut(s)	452
BseDI	CCNNGG	2 cut(s)	81, 409
BseGI	GGATG	4 cut(s)	490, 967, 1086, 1336
BseLI	CCNNNNNNNGG	2 cut(s)	312, 452
BseMI	GCAATG	1 cut(s)	711
BseMII	CTCAG	6 cut(s)	11, 122, 366, 566, 738, 1269
BseNI	ACTGG	3 cut(s)	829, 1274, 1419
BseSI	GKGCMC	1 cut(s)	185
BseXI	GCAGC	5 cut(s)	354, 373, 376, 1000, 1055
BseYI	CCCAGC	2 cut(s)	166, 778
BsgI	GTGCAG	1 cut(s)	305
Bsh1236I	CGCG	1 cut(s)	1217
Bsh1285I	CGRYCG	1 cut(s)	140
BshFI	GGCC	3 cut(s)	5, 257, 1273
BshNI	GGYRCC	1 cut(s)	269
BshTI	ACCGGT	1 cut(s)	222
BsiEI	CGRYCG	1 cut(s)	140
BsiHKAI	GWGCWC	3 cut(s)	185, 1146, 1321
BsiSI	CCGG	4 cut(s)	6, 223, 446, 453
BsiWI	CGTACG	1 cut(s)	141
BslFI	GGGAC	3 cut(s)	183, 739, 1012
BslI	CCNNNNNNNGG	2 cut(s)	312, 452
BsmAI	GTCTC	2 cut(s)	606, 1386
BsmBI	CGTCTC	1 cut(s)	1386
BsmFI	GGGAC	3 cut(s)	183, 739, 1012
BsnI	GGCC	3 cut(s)	5, 257, 1273
Bsp119I	TTCGAA	3 cut(s)	345, 757, 1054
Bsp1286I	GDGCHC	3 cut(s)	185, 1146, 1321
Bsp13I	TCCGGA	1 cut(s)	452
Bsp1407I	TGTACA	1 cut(s)	150
Bsp1720I	GCTNAGC	1 cut(s)	131
BspACI	CCGC	1 cut(s)	517
BspANI	GGCC	3 cut(s)	5, 257, 1273
BspCNI	CTCAG	6 cut(s)	12, 123, 367, 567, 739, 1270
BspEI	TCCGGA	1 cut(s)	452
BspFNI	CGCG	1 cut(s)	1217
BspLI	GGNNCC	5 cut(s)	87, 256, 271, 1357, 1491
BspMAI	CTGCAG	2 cut(s)	177, 985
BspMI	ACCTGC	1 cut(s)	631
BspOI	GCTAGC	1 cut(s)	1527
BspPI	GGATC	8 cut(s)	79, 341, 499, 881, 1061, 1141, 1350, 1363
BspT104I	TTCGAA	3 cut(s)	345, 757, 1054
BspT107I	GGYRCC	1 cut(s)	269
BsrDI	GCAATG	1 cut(s)	711
BsrFI	RCCGGY	1 cut(s)	222
BsrGI	TGTACA	1 cut(s)	150
BsrI	ACTGG	3 cut(s)	829, 1274, 1419
BssAI	RCCGGY	1 cut(s)	222
BssECI	CCNNGG	2 cut(s)	81, 409
BssNAI	GTATAC	1 cut(s)	1247
BssNI	GRCGYC	1 cut(s)	270
BssT1I	CCWWGG	2 cut(s)	81, 409
Bst1107I	GTATAC	1 cut(s)	1247
Bst4CI	ACNGT	5 cut(s)	121, 196, 513, 730, 1397
BstACI	GRCGYC	1 cut(s)	270
BstAPI	GCANNNNNTGC	2 cut(s)	367, 710
BstAUI	TGTACA	1 cut(s)	150
BstBI	TTCGAA	3 cut(s)	345, 757, 1054
BstC8I	GCNNGC	9 cut(s)	274, 498, 685, 804, 949, 953, 1202, 1415, 1525
BstDEI	CTNAG	8 cut(s)	20, 131, 375, 575, 747, 880, 1039, 1278
BstF5I	GGATG	4 cut(s)	490, 967, 1086, 1336
BstFNI	CGCG	1 cut(s)	1217
BstH2I	RGCGCY	3 cut(s)	273, 326, 1513
BstHHI	GCGC	5 cut(s)	230, 272, 325, 1217, 1512
BstMAI	GTCTC	2 cut(s)	606, 1386
BstMCI	CGRYCG	1 cut(s)	140
BstMWI	GCNNNNNNNGC	3 cut(s)	172, 367, 710
BstNSI	RCATGY	3 cut(s)	742, 1157, 1295
BstSFI	CTRYAG	2 cut(s)	173, 981
BstSLI	GKGCMC	1 cut(s)	185
BstUI	CGCG	1 cut(s)	1217
BstV1I	GCAGC	5 cut(s)	354, 373, 376, 1000, 1055
BstV2I	GAAGAC	2 cut(s)	180, 221
BstX2I	RGATCY	4 cut(s)	876, 1133, 1355, 1429
BstYI	RGATCY	4 cut(s)	876, 1133, 1355, 1429
BstZ17I	GTATAC	1 cut(s)	1247
BsuRI	GGCC	3 cut(s)	5, 257, 1273
BtrI	CACGTC	1 cut(s)	186
BtsCI	GGATG	4 cut(s)	490, 967, 1086, 1336
BtsI	GCAGTG	1 cut(s)	283
BtsIMutI	CAGTG	2 cut(s)	283, 1316
BveI	ACCTGC	1 cut(s)	631
Cac8I	GCNNGC	9 cut(s)	274, 498, 685, 804, 949, 953, 1202, 1415, 1525
CaiI	CAGNNNCTG	1 cut(s)	367
CfoI	GCGC	5 cut(s)	230, 272, 325, 1217, 1512
Cfr10I	RCCGGY	1 cut(s)	222
Cfr13I	GGNCC	3 cut(s)	85, 255, 854
Csp6I	GTAC	6 cut(s)	142, 151, 605, 822, 1254, 1464
CspAI	ACCGGT	1 cut(s)	222
CviAII	CATG	7 cut(s)	236, 428, 569, 587, 739, 1154, 1292
CviQI	GTAC	6 cut(s)	142, 151, 605, 822, 1254, 1464
DdeI	CTNAG	8 cut(s)	20, 131, 375, 575, 747, 880, 1039, 1278
DinI	GGCGCC	1 cut(s)	271
DraIII	CACNNNGTG	1 cut(s)	392
EaeI	YGGCCR	1 cut(s)	3
Ecl136II	GAGCTC	1 cut(s)	1144
Eco130I	CCWWGG	2 cut(s)	81, 409
Eco24I	GRGCYC	1 cut(s)	1146
Eco32I	GATATC	1 cut(s)	505
Eco47I	GGWCC	2 cut(s)	85, 854
Eco47III	AGCGCT	1 cut(s)	324
Eco53kI	GAGCTC	1 cut(s)	1144
Eco57I	CTGAAG	1 cut(s)	1292
EcoICRI	GAGCTC	1 cut(s)	1144
EcoRI	GAATTC	2 cut(s)	694, 753
EcoRV	GATATC	1 cut(s)	505
EcoT14I	CCWWGG	2 cut(s)	81, 409
EcoT38I	GRGCYC	1 cut(s)	1146
EgeI	GGCGCC	1 cut(s)	271
EheI	GGCGCC	1 cut(s)	271
ErhI	CCWWGG	2 cut(s)	81, 409
Esp3I	CGTCTC	1 cut(s)	1386
FaeI	CATG	7 cut(s)	239, 431, 572, 590, 742, 1157, 1295
FalI	AAGNNNNNCTT	2 cut(s)	454, 486
FaqI	GGGAC	3 cut(s)	183, 739, 1012
FatI	CATG	7 cut(s)	235, 427, 568, 586, 738, 1153, 1291
FblI	GTMKAC	1 cut(s)	1246
Fnu4HI	GCNGC	5 cut(s)	362, 365, 368, 989, 1044
FokI	GGATG	4 cut(s)	497, 974, 1093, 1343
FriOI	GRGCYC	1 cut(s)	1146
Fsp4HI	GCNGC	5 cut(s)	362, 365, 368, 989, 1044
FspBI	CTAG	6 cut(s)	11, 602, 972, 1208, 1242, 1524
GlaI	GCGC	5 cut(s)	229, 271, 324, 1216, 1511
GluI	GCNGC	5 cut(s)	362, 365, 368, 989, 1044
GsaI	CCCAGC	2 cut(s)	170, 782
GsuI	CTGGAG	1 cut(s)	846
HaeII	RGCGCY	3 cut(s)	273, 326, 1513
HaeIII	GGCC	3 cut(s)	5, 257, 1273
HapII	CCGG	4 cut(s)	6, 223, 446, 453
HhaI	GCGC	5 cut(s)	230, 272, 325, 1217, 1512
Hin1I	GRCGYC	1 cut(s)	270
Hin1II	CATG	7 cut(s)	239, 431, 572, 590, 742, 1157, 1295
Hin6I	GCGC	5 cut(s)	228, 270, 323, 1215, 1510
HinP1I	GCGC	5 cut(s)	228, 270, 323, 1215, 1510
HindIII	AAGCTT	3 cut(s)	560, 945, 1304
HinfI	GANTC	5 cut(s)	95, 449, 793, 1178, 1372
HpaII	CCGG	4 cut(s)	6, 223, 446, 453
HphI	GGTGA	4 cut(s)	662, 885, 912, 1277
Hpy166II	GTNNAC	7 cut(s)	78, 151, 183, 199, 607, 1036, 1247
Hpy188I	TCNGA	4 cut(s)	94, 112, 558, 1138
Hpy188III	TCNNGA	4 cut(s)	453, 1277, 1328, 1353
Hpy8I	GTNNAC	7 cut(s)	78, 151, 183, 199, 607, 1036, 1247
HpyAV	CCTTC	6 cut(s)	49, 912, 952, 1015, 1078, 1369
HpyCH4III	ACNGT	5 cut(s)	121, 196, 513, 730, 1397
HpyCH4IV	ACGT	2 cut(s)	185, 1163
HpyF10VI	GCNNNNNNNGC	3 cut(s)	172, 367, 710
HpyF3I	CTNAG	8 cut(s)	20, 131, 375, 575, 747, 880, 1039, 1278
HpySE526I	ACGT	2 cut(s)	185, 1163
Hsp92I	GRCGYC	1 cut(s)	270
Hsp92II	CATG	7 cut(s)	239, 431, 572, 590, 742, 1157, 1295
HspAI	GCGC	5 cut(s)	228, 270, 323, 1215, 1510
KasI	GGCGCC	1 cut(s)	269
Kpn2I	TCCGGA	1 cut(s)	452
LmnI	GCTCC	1 cut(s)	1489
Lsp1109I	GCAGC	5 cut(s)	354, 373, 376, 1000, 1055
LweI	GCATC	3 cut(s)	37, 952, 958
MaeI	CTAG	6 cut(s)	11, 602, 972, 1208, 1242, 1524
MaeII	ACGT	2 cut(s)	185, 1163
MaeIII	GTNAC	3 cut(s)	404, 730, 1265
MboII	GAAGA	5 cut(s)	26, 180, 226, 537, 1187
MfeI	CAATTG	1 cut(s)	1518
MflI	RGATCY	4 cut(s)	876, 1133, 1355, 1429
MhlI	GDGCHC	3 cut(s)	185, 1146, 1321
MluCI	AATT	7 cut(s)	628, 694, 753, 766, 830, 1341, 1518
Mly113I	GGCGCC	1 cut(s)	270
MlyI	GAGTC	1 cut(s)	802
MmeI	TCCRAC	1 cut(s)	1094
MnlI	CCTC	8 cut(s)	15, 237, 482, 546, 1243, 1275, 1284, 1402
MroI	TCCGGA	1 cut(s)	452
MroXI	GAANNNNTTC	2 cut(s)	1305, 1376
MseI	TTAA	1 cut(s)	1425
MspA1I	CMGCKG	2 cut(s)	367, 782
MspI	CCGG	4 cut(s)	6, 223, 446, 453
MunI	CAATTG	1 cut(s)	1518
MvnI	CGCG	1 cut(s)	1217
MwoI	GCNNNNNNNGC	3 cut(s)	172, 367, 710
NarI	GGCGCC	1 cut(s)	270
NheI	GCTAGC	1 cut(s)	1523
NlaIII	CATG	7 cut(s)	239, 431, 572, 590, 742, 1157, 1295
NlaIV	GGNNCC	5 cut(s)	87, 256, 271, 1357, 1491
NmuCI	GTSAC	1 cut(s)	1265
NspI	RCATGY	3 cut(s)	742, 1157, 1295
NspV	TTCGAA	3 cut(s)	345, 757, 1054
PciI	ACATGT	1 cut(s)	738
PdmI	GAANNNNTTC	2 cut(s)	1305, 1376
PfeI	GAWTC	4 cut(s)	95, 449, 1178, 1372
Pfl23II	CGTACG	1 cut(s)	141
PinAI	ACCGGT	1 cut(s)	222
PkrI	GCNGC	5 cut(s)	363, 366, 369, 990, 1045
Ple19I	CGATCG	1 cut(s)	140
PleI	GAGTC	1 cut(s)	801
PluTI	GGCGCC	1 cut(s)	273
PpsI	GAGTC	1 cut(s)	801
PscI	ACATGT	1 cut(s)	738
PsiI	TTATAA	1 cut(s)	638
Psp124BI	GAGCTC	1 cut(s)	1146
PspFI	CCCAGC	2 cut(s)	166, 778
PspLI	CGTACG	1 cut(s)	141
PspN4I	GGNNCC	5 cut(s)	87, 256, 271, 1357, 1491
PspPI	GGNCC	3 cut(s)	85, 255, 854
PstI	CTGCAG	2 cut(s)	177, 985
PstNI	CAGNNNCTG	1 cut(s)	367
PsuI	RGATCY	4 cut(s)	876, 1133, 1355, 1429
PvuI	CGATCG	1 cut(s)	140
PvuII	CAGCTG	2 cut(s)	367, 782
RsaI	GTAC	6 cut(s)	143, 152, 606, 823, 1255, 1465
RsaNI	GTAC	6 cut(s)	142, 151, 605, 822, 1254, 1464
SacI	GAGCTC	1 cut(s)	1146
SaqAI	TTAA	1 cut(s)	1425
SatI	GCNGC	5 cut(s)	362, 365, 368, 989, 1044
Sau96I	GGNCC	3 cut(s)	85, 255, 854
SchI	GAGTC	1 cut(s)	802
SduI	GDGCHC	3 cut(s)	185, 1146, 1321
SfaNI	GCATC	3 cut(s)	37, 952, 958
SfcI	CTRYAG	2 cut(s)	173, 981
SfoI	GGCGCC	1 cut(s)	271
SfuI	TTCGAA	3 cut(s)	345, 757, 1054
SinI	GGWCC	2 cut(s)	85, 854
SmlI	CTYRAG	1 cut(s)	1320
SmoI	CTYRAG	1 cut(s)	1320
SpeI	ACTAGT	1 cut(s)	1207
Sse9I	AATT	7 cut(s)	628, 694, 753, 766, 830, 1341, 1518
SsiI	CCGC	1 cut(s)	517
SspDI	GGCGCC	1 cut(s)	269
SspMI	CTAG	6 cut(s)	11, 602, 972, 1208, 1242, 1524
SstI	GAGCTC	1 cut(s)	1146
StyI	CCWWGG	2 cut(s)	81, 409
TaaI	ACNGT	5 cut(s)	121, 196, 513, 730, 1397
TaiI	ACGT	2 cut(s)	188, 1166
TaqI	TCGA	5 cut(s)	45, 345, 757, 1054, 1448
TasI	AATT	7 cut(s)	628, 694, 753, 766, 830, 1341, 1518
TatI	WGTACW	3 cut(s)	150, 604, 1253
TfiI	GAWTC	4 cut(s)	95, 449, 1178, 1372
Tru1I	TTAA	1 cut(s)	1425
Tru9I	TTAA	1 cut(s)	1425
TscAI	CASTG	2 cut(s)	283, 1316
TseFI	GTSAC	1 cut(s)	1265
TseI	GCWGC	5 cut(s)	361, 364, 367, 988, 1043
Tsp45I	GTSAC	1 cut(s)	1265
TspDTI	ATGAA	7 cut(s)	87, 416, 997, 1097, 1188, 1351, 1471
TspGWI	ACGGA	1 cut(s)	1460
TspRI	CASTG	2 cut(s)	283, 1316
VneI	GTGCAC	1 cut(s)	181
VpaK11BI	GGWCC	2 cut(s)	85, 854
XapI	RAATTY	3 cut(s)	694, 753, 830
XceI	RCATGY	3 cut(s)	742, 1157, 1295
XcmI	CCANNNNNNNNNTGG	1 cut(s)	786
XmiI	GTMKAC	1 cut(s)	1246
XmnI	GAANNNNTTC	2 cut(s)	1305, 1376
XspI	CTAG	6 cut(s)	11, 602, 972, 1208, 1242, 1524

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.