cell division cycle 5-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G09770 |
| fragaria_vesca | FvH4_3g19200 FvH4_3g19210 FvH4_6g01950 |
| malus_domestica | MD04G1229500.v1.1 MD12G1246400.v1.1 |
| prunus_persica | Prupe.6G349400_v2.0.a1 |
| pyrus_communis | pycom04g20330 pycom04g20340 pycom12g22600 |
| rosa_chinensis | RchiOBHm_Chr3g0449801 RchiOBHm_Chr5g0032281 |
| rosa_laevigata | RLG00000025799 RLG00000033377 |
| rosa_multiflora | Rmu_co8441867.1_g000001 Rmu_sc0000610.1_g000011 Rmu_sc0013983.1_g000008 Rmu_ssc0000013.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00048170 Rroxscaffold_1G00048180 Rroxscaffold_6G00427620 |
| rosa_rugosa | Rorug02G0623400 Rorug02G0623400 Rorug05G0130300 |
| rosa_samantha | Rh3AG021600 Rh3BG022300 Rh3CG020900 Rh3DG022000 Rh5BG224900 Rh5CG250300 Rh5DG229500 Rh5DG229600 |
| rosa_wichuraiana | Rw3G001770 Rw5G020450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 195 |
| AluBI | AGCT | 2 cut(s) | 38, 115 |
| AluI | AGCT | 2 cut(s) | 38, 115 |
| Alw21I | GWGCWC | 1 cut(s) | 117 |
| Ama87I | CYCGRG | 1 cut(s) | 116 |
| AoxI | GGCC | 1 cut(s) | 70 |
| ApeKI | GCWGC | 1 cut(s) | 62 |
| AspLEI | GCGC | 1 cut(s) | 191 |
| AvaI | CYCGRG | 1 cut(s) | 116 |
| BanII | GRGCYC | 1 cut(s) | 117 |
| Bbv12I | GWGCWC | 1 cut(s) | 117 |
| BbvI | GCAGC | 1 cut(s) | 74 |
| BfaI | CTAG | 1 cut(s) | 211 |
| BglII | AGATCT | 1 cut(s) | 145 |
| BisI | GCNGC | 1 cut(s) | 63 |
| BlsI | GCNGC | 1 cut(s) | 64 |
| BmeT110I | CYCGRG | 1 cut(s) | 116 |
| BpuEI | CTTGAG | 1 cut(s) | 44 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 135, 165 |
| Bse1I | ACTGG | 1 cut(s) | 165 |
| BseNI | ACTGG | 1 cut(s) | 165 |
| BseXI | GCAGC | 1 cut(s) | 74 |
| BshFI | GGCC | 1 cut(s) | 72 |
| BsiHKAI | GWGCWC | 1 cut(s) | 117 |
| BsiHKCI | CYCGRG | 1 cut(s) | 116 |
| BsiSI | CCGG | 1 cut(s) | 73 |
| BsnI | GGCC | 1 cut(s) | 72 |
| BsoBI | CYCGRG | 1 cut(s) | 116 |
| Bsp1286I | GDGCHC | 1 cut(s) | 117 |
| Bsp143I | GATC | 1 cut(s) | 145 |
| BspANI | GGCC | 1 cut(s) | 72 |
| BsrI | ACTGG | 1 cut(s) | 165 |
| BssMI | GATC | 1 cut(s) | 145 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 127 |
| BstHHI | GCGC | 1 cut(s) | 191 |
| BstKTI | GATC | 1 cut(s) | 148 |
| BstMBI | GATC | 1 cut(s) | 145 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 127 |
| BstV1I | GCAGC | 1 cut(s) | 74 |
| BstX2I | RGATCY | 1 cut(s) | 145 |
| BstYI | RGATCY | 1 cut(s) | 145 |
| BsuRI | GGCC | 1 cut(s) | 72 |
| CfoI | GCGC | 1 cut(s) | 191 |
| Csp6I | GTAC | 1 cut(s) | 194 |
| CviJI | RGCY | 4 cut(s) | 11, 38, 72, 115 |
| CviKI_1 | RGCY | 4 cut(s) | 11, 38, 72, 115 |
| CviQI | GTAC | 1 cut(s) | 194 |
| DpnI | GATC | 1 cut(s) | 147 |
| DpnII | GATC | 1 cut(s) | 145 |
| Ecl136II | GAGCTC | 1 cut(s) | 115 |
| Eco24I | GRGCYC | 1 cut(s) | 117 |
| Eco53kI | GAGCTC | 1 cut(s) | 115 |
| Eco88I | CYCGRG | 1 cut(s) | 116 |
| EcoICRI | GAGCTC | 1 cut(s) | 115 |
| EcoT38I | GRGCYC | 1 cut(s) | 117 |
| FaiI | YATR | 2 cut(s) | 86, 141 |
| Fnu4HI | GCNGC | 1 cut(s) | 63 |
| FriOI | GRGCYC | 1 cut(s) | 117 |
| Fsp4HI | GCNGC | 1 cut(s) | 63 |
| FspBI | CTAG | 1 cut(s) | 211 |
| GlaI | GCGC | 1 cut(s) | 190 |
| GluI | GCNGC | 1 cut(s) | 63 |
| HaeIII | GGCC | 1 cut(s) | 72 |
| HapII | CCGG | 1 cut(s) | 73 |
| HhaI | GCGC | 1 cut(s) | 191 |
| Hin6I | GCGC | 1 cut(s) | 189 |
| HinP1I | GCGC | 1 cut(s) | 189 |
| HindIII | AAGCTT | 1 cut(s) | 36 |
| HpaII | CCGG | 1 cut(s) | 73 |
| Hpy188I | TCNGA | 1 cut(s) | 102 |
| HpyCH4V | TGCA | 1 cut(s) | 130 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 127 |
| HspAI | GCGC | 1 cut(s) | 189 |
| Kzo9I | GATC | 1 cut(s) | 145 |
| LmnI | GCTCC | 1 cut(s) | 112 |
| LpnPI | CCDG | 3 cut(s) | 54, 86, 146 |
| Lsp1109I | GCAGC | 1 cut(s) | 74 |
| MaeI | CTAG | 1 cut(s) | 211 |
| MalI | GATC | 1 cut(s) | 147 |
| MboI | GATC | 1 cut(s) | 145 |
| MboII | GAAGA | 1 cut(s) | 199 |
| MflI | RGATCY | 1 cut(s) | 145 |
| MhlI | GDGCHC | 1 cut(s) | 117 |
| MluCI | AATT | 1 cut(s) | 56 |
| MnlI | CCTC | 2 cut(s) | 85, 129 |
| MspI | CCGG | 1 cut(s) | 73 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 127 |
| NdeII | GATC | 1 cut(s) | 145 |
| PaeR7I | CTCGAG | 1 cut(s) | 116 |
| PkrI | GCNGC | 1 cut(s) | 64 |
| Psp124BI | GAGCTC | 1 cut(s) | 117 |
| PspXI | VCTCGAGB | 1 cut(s) | 116 |
| PsuI | RGATCY | 1 cut(s) | 145 |
| RsaI | GTAC | 1 cut(s) | 195 |
| RsaNI | GTAC | 1 cut(s) | 194 |
| SacI | GAGCTC | 1 cut(s) | 117 |
| SatI | GCNGC | 1 cut(s) | 63 |
| Sau3AI | GATC | 1 cut(s) | 145 |
| SduI | GDGCHC | 1 cut(s) | 117 |
| SetI | ASST | 3 cut(s) | 40, 117, 140 |
| Sfr274I | CTCGAG | 1 cut(s) | 116 |
| SgeI | CNNG | 9 cut(s) | 35, 47, 62, 81, 85, 128, 130, 161, 173 |
| SlaI | CTCGAG | 1 cut(s) | 116 |
| SmlI | CTYRAG | 2 cut(s) | 23, 116 |
| SmoI | CTYRAG | 2 cut(s) | 23, 116 |
| Sse9I | AATT | 1 cut(s) | 56 |
| SspMI | CTAG | 1 cut(s) | 211 |
| SstI | GAGCTC | 1 cut(s) | 117 |
| TaqI | TCGA | 1 cut(s) | 117 |
| TasI | AATT | 1 cut(s) | 56 |
| TseI | GCWGC | 1 cut(s) | 62 |
| XhoI | CTCGAG | 1 cut(s) | 116 |
| XspI | CTAG | 1 cut(s) | 211 |